RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 TMEM238C9JI98 176 aa11.37□□□□□ -0.59
LMO4-201ENST00000370542 TMEM177Q53S58 311 aa11.37□□□□□ -0.59
LMO4-201ENST00000370542 PRR25Q96S07 402 aa11.37□□□□□ -0.59
LMO4-201ENST00000370542 TRGV9Q99603 122 aa11.37□□□□□ -0.59
LMO4-201ENST00000370542 ZNF256Q9Y2P7 627 aaPredicted RBP11.37□□□□□ -0.59
LMO4-201ENST00000370542 LYSTQ99698 3801 aa11.36□□□□□ -0.59
LMO4-201ENST00000370542 LCE6AA0A183 80 aa11.36□□□□□ -0.59
LMO4-201ENST00000370542 CT45A10P0DMU9 189 aa11.36□□□□□ -0.59
LMO4-201ENST00000370542 LGALS9BQ3B8N2 356 aa11.36□□□□□ -0.59
LMO4-201ENST00000370542 LGALS9CQ6DKI2 356 aa11.36□□□□□ -0.59
LMO4-201ENST00000370542 C16orf54Q6UWD8 224 aa11.36□□□□□ -0.59
LMO4-201ENST00000370542 ZNF562Q6V9R5 426 aa11.36□□□□□ -0.59
LMO4-201ENST00000370542 FA2HQ7L5A8 372 aa11.36□□□□□ -0.59
LMO4-201ENST00000370542 TMEM167AQ8TBQ9 72 aa11.36□□□□□ -0.59
LMO4-201ENST00000370542 SSBP4Q9BWG4 385 aaPredicted RBP11.36□□□□□ -0.59
LMO4-201ENST00000370542 FBXL15Q9H469 300 aa11.36□□□□□ -0.59
LMO4-201ENST00000370542 OTORQ9NRC9 128 aa11.36□□□□□ -0.59
LMO4-201ENST00000370542 AP5S1Q9NUS5 200 aa11.36□□□□□ -0.59
LMO4-201ENST00000370542 PGPA6NDG6 321 aa11.35□□□□□ -0.59
LMO4-201ENST00000370542 PLP1P60201 277 aa11.35□□□□□ -0.59
LMO4-201ENST00000370542 PSG3Q16557 428 aa11.35□□□□□ -0.59
LMO4-201ENST00000370542 CASC10Q5T4H9 136 aa11.35□□□□□ -0.59
LMO4-201ENST00000370542 U3KQK5 164 aa11.35□□□□□ -0.59
LMO4-201ENST00000370542 TRAV8-6A0A0B4J262 113 aa11.34□□□□□ -0.59
LMO4-201ENST00000370542 A0A1B0GUT8 65 aa11.34□□□□□ -0.59
LMO4-201ENST00000370542 DLX4Q92988 240 aaPredicted RBP11.34□□□□□ -0.59
LMO4-201ENST00000370542 PGLYRP4Q96LB8 373 aa11.34□□□□□ -0.59
LMO4-201ENST00000370542 TMEM14CQ9P0S9 112 aa11.34□□□□□ -0.59
LMO4-201ENST00000370542 TRAV5A0A0B4J249 113 aa11.33□□□□□ -0.6
LMO4-201ENST00000370542 LINC01619G3V211 115 aa11.33□□□□□ -0.6
LMO4-201ENST00000370542 K7EQM0 130 aa11.33□□□□□ -0.6
LMO4-201ENST00000370542 OVOL1O14753 267 aa11.33□□□□□ -0.6
LMO4-201ENST00000370542 TCRAP04437 139 aa11.33□□□□□ -0.6
LMO4-201ENST00000370542 LGALS1P09382 135 aaKnown RBP11.33□□□□□ -0.6
LMO4-201ENST00000370542 SAA1P0DJI8 122 aaPredicted RBP11.33□□□□□ -0.6
LMO4-201ENST00000370542 PVRIGQ6DKI7 326 aa11.33□□□□□ -0.6
LMO4-201ENST00000370542 C2orf91Q6ZV80 131 aa11.33□□□□□ -0.6
LMO4-201ENST00000370542 NEGR1Q7Z3B1 354 aa11.33□□□□□ -0.6
LMO4-201ENST00000370542 LINC00305Q7Z4B0 112 aa11.33□□□□□ -0.6
LMO4-201ENST00000370542 S100A7AQ86SG5 101 aa11.33□□□□□ -0.6
LMO4-201ENST00000370542 BOD1L2Q8IYS8 172 aa11.33□□□□□ -0.6
LMO4-201ENST00000370542 TEX45Q8NA69 505 aa11.33□□□□□ -0.6
LMO4-201ENST00000370542 OR2K2Q8NGT1 345 aa11.33□□□□□ -0.6
LMO4-201ENST00000370542 LINC00479Q96M42 142 aa11.33□□□□□ -0.6
LMO4-201ENST00000370542 J3QR89 54 aa11.32□□□□□ -0.6
LMO4-201ENST00000370542 BRI3O95415 125 aa11.32□□□□□ -0.6
LMO4-201ENST00000370542 IGKV1-16P04430 117 aa11.32□□□□□ -0.6
LMO4-201ENST00000370542 PYYP10082 97 aa11.32□□□□□ -0.6
LMO4-201ENST00000370542 GATA2P23769 480 aaPredicted RBP11.32□□□□□ -0.6
LMO4-201ENST00000370542 SSBP2P81877 361 aaPredicted RBP11.32□□□□□ -0.6
LMO4-201ENST00000370542 ECSCRQ19T08 205 aa11.32□□□□□ -0.6
LMO4-201ENST00000370542 PATE2Q6UY27 113 aa11.32□□□□□ -0.6
LMO4-201ENST00000370542 PPP1R27Q86WC6 154 aa11.32□□□□□ -0.6
LMO4-201ENST00000370542 OR1B1Q8NGR6 318 aa11.32□□□□□ -0.6
LMO4-201ENST00000370542 PRSS3P2Q8NHM4 247 aa11.32□□□□□ -0.6
LMO4-201ENST00000370542 SMAD5-AS1Q9Y6J3 95 aa11.32□□□□□ -0.6
LMO4-201ENST00000370542 HERC2O95714 4834 aa11.32□□□□□ -0.6
LMO4-201ENST00000370542 IGHV4OR15-8A0A075B7B6 117 aa11.31□□□□□ -0.6
LMO4-201ENST00000370542 A0A087WW49 117 aa11.31□□□□□ -0.6
LMO4-201ENST00000370542 A0A087X0K7 114 aa11.31□□□□□ -0.6
LMO4-201ENST00000370542 CRYGCP07315 174 aa11.31□□□□□ -0.6
LMO4-201ENST00000370542 CRYGBP07316 175 aa11.31□□□□□ -0.6
LMO4-201ENST00000370542 VMA21Q3ZAQ7 101 aa11.31□□□□□ -0.6
LMO4-201ENST00000370542 ZNF493Q6ZR52 646 aa11.31□□□□□ -0.6
LMO4-201ENST00000370542 LYPD1Q8N2G4 141 aa11.31□□□□□ -0.6
LMO4-201ENST00000370542 GTSF1Q8WW33 167 aa11.31□□□□□ -0.6
LMO4-201ENST00000370542 FLYWCH2Q96CP2 140 aaKnown RBP11.31□□□□□ -0.6
LMO4-201ENST00000370542 HARBI1Q96MB7 349 aa11.31□□□□□ -0.6
LMO4-201ENST00000370542 FBLL1A6NHQ2 334 aaKnown RBP11.3□□□□□ -0.6
LMO4-201ENST00000370542 H3BUA1 57 aa11.3□□□□□ -0.6
LMO4-201ENST00000370542 ZNF207O43670 478 aaKnown RBP11.3□□□□□ -0.6
LMO4-201ENST00000370542 IGLV2-23P01705 113 aa11.3□□□□□ -0.6
LMO4-201ENST00000370542 APOHP02749 345 aaPredicted RBP11.3□□□□□ -0.6
LMO4-201ENST00000370542 FABP2P12104 132 aa11.3□□□□□ -0.6
LMO4-201ENST00000370542 SLURP1P55000 103 aa11.3□□□□□ -0.6
LMO4-201ENST00000370542 PLGLAQ15195 96 aa11.3□□□□□ -0.6
LMO4-201ENST00000370542 Q86TA4 180 aa11.3□□□□□ -0.6
LMO4-201ENST00000370542 NPIPB3Q92617 1050 aa11.3□□□□□ -0.6
LMO4-201ENST00000370542 HIGD1BQ9P298 99 aa11.3□□□□□ -0.6
LMO4-201ENST00000370542 TNCP24821 2201 aa11.29□□□□□ -0.6
LMO4-201ENST00000370542 IGKV1D-37A0A075B6S9 117 aa11.29□□□□□ -0.6
LMO4-201ENST00000370542 A0A0G2JLM5 398 aa11.29□□□□□ -0.6
LMO4-201ENST00000370542 SERTM2A0A1B0GWG4 89 aa11.29□□□□□ -0.6
LMO4-201ENST00000370542 TMEM189A5PLL7 270 aa11.29□□□□□ -0.6
LMO4-201ENST00000370542 LGALS7P47929 136 aa11.29□□□□□ -0.6
LMO4-201ENST00000370542 TMEM75Q8N9X5 138 aa11.29□□□□□ -0.6
LMO4-201ENST00000370542 ARPC1AQ92747 370 aa11.29□□□□□ -0.6
LMO4-201ENST00000370542 Q9H3A6 140 aa11.29□□□□□ -0.6
LMO4-201ENST00000370542 SAP30O75446 220 aa11.28□□□□□ -0.6
LMO4-201ENST00000370542 FGF6P10767 208 aa11.28□□□□□ -0.6
LMO4-201ENST00000370542 HLA-DRB4P13762 266 aa11.28□□□□□ -0.6
LMO4-201ENST00000370542 GP9P14770 177 aa11.28□□□□□ -0.6
LMO4-201ENST00000370542 GNG5P63218 68 aa11.28□□□□□ -0.6
LMO4-201ENST00000370542 MRGPRG-AS1Q2M3A8 158 aa11.28□□□□□ -0.6
LMO4-201ENST00000370542 MORN5Q5VZ52 161 aa11.28□□□□□ -0.6
LMO4-201ENST00000370542 LINC00173Q6ZV60 143 aa11.28□□□□□ -0.6
LMO4-201ENST00000370542 SBSPONQ8IVN8 264 aa11.28□□□□□ -0.6
LMO4-201ENST00000370542 BLNKQ8WV28 456 aa11.28□□□□□ -0.6
LMO4-201ENST00000370542 ASCL2Q99929 193 aa11.28□□□□□ -0.6
LMO4-201ENST00000370542 SIGLEC8Q9NYZ4 499 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms