RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 MGST1P10620 155 aaKnown RBP10.77□□□□□ -0.69
SMPDL3A-201ENST00000368440 OR5I1Q13606 314 aa10.77□□□□□ -0.69
SMPDL3A-201ENST00000368440 RNF212Q495C1 297 aa10.77□□□□□ -0.69
SMPDL3A-201ENST00000368440 DKK2Q9UBU2 259 aa10.77□□□□□ -0.69
SMPDL3A-201ENST00000368440 KMT2CQ8NEZ4 4911 aaKnown RBP10.77□□□□□ -0.69
SMPDL3A-201ENST00000368440 DYNC2H1Q8NCM8 4307 aaKnown RBP10.76□□□□□ -0.69
SMPDL3A-201ENST00000368440 TRBV7-9A0A0J9YWB2 115 aa10.76□□□□□ -0.69
SMPDL3A-201ENST00000368440 K7EN84 100 aa10.76□□□□□ -0.69
SMPDL3A-201ENST00000368440 CEMP1Q6PRD7 247 aaPredicted RBP10.76□□□□□ -0.69
SMPDL3A-201ENST00000368440 RNASE8Q8TDE3 154 aaKnown RBP10.76□□□□□ -0.69
SMPDL3A-201ENST00000368440 SMCO4Q9NRQ5 59 aa10.76□□□□□ -0.69
SMPDL3A-201ENST00000368440 URGCP-MRPS24S4R325 110 aa10.76□□□□□ -0.69
SMPDL3A-201ENST00000368440 NUPR2A6NF83 97 aa10.75□□□□□ -0.69
SMPDL3A-201ENST00000368440 IGLV2-11P01706 119 aa10.75□□□□□ -0.69
SMPDL3A-201ENST00000368440 SPART-AS1P0CW21 52 aa10.75□□□□□ -0.69
SMPDL3A-201ENST00000368440 PRNTQ86SH4 94 aa10.75□□□□□ -0.69
SMPDL3A-201ENST00000368440 BAGE2Q86Y30 109 aa10.75□□□□□ -0.69
SMPDL3A-201ENST00000368440 C16orf74Q96GX8 76 aa10.75□□□□□ -0.69
SMPDL3A-201ENST00000368440 TCEAL7Q9BRU2 100 aa10.75□□□□□ -0.69
SMPDL3A-201ENST00000368440 TMA7Q9Y2S6 64 aaKnown RBP10.75□□□□□ -0.69
SMPDL3A-201ENST00000368440 LENEPQ9Y5L5 61 aa10.75□□□□□ -0.69
SMPDL3A-201ENST00000368440 B4DEV8 164 aa10.74□□□□□ -0.69
SMPDL3A-201ENST00000368440 C9JCJ5 164 aa10.74□□□□□ -0.69
SMPDL3A-201ENST00000368440 TMEM263Q8WUH6 116 aaKnown RBP10.74□□□□□ -0.69
SMPDL3A-201ENST00000368440 PYGO2Q9BRQ0 406 aa10.74□□□□□ -0.69
SMPDL3A-201ENST00000368440 SERTM2A0A1B0GWG4 89 aa10.74□□□□□ -0.69
SMPDL3A-201ENST00000368440 MT-ND4LP03901 98 aa10.74□□□□□ -0.69
SMPDL3A-201ENST00000368440 TMEM183BQ1AE95 376 aa10.74□□□□□ -0.69
SMPDL3A-201ENST00000368440 PRR27Q6MZM9 219 aa10.74□□□□□ -0.69
SMPDL3A-201ENST00000368440 PSG8Q9UQ74 426 aa10.74□□□□□ -0.69
SMPDL3A-201ENST00000368440 PLECQ15149 4684 aaKnown RBP10.73□□□□□ -0.69
SMPDL3A-201ENST00000368440 FMC1Q96HJ9 113 aa10.73□□□□□ -0.69
SMPDL3A-201ENST00000368440 C8orf49Q96NF6 230 aa10.73□□□□□ -0.69
SMPDL3A-201ENST00000368440 A0A087WWC5 75 aa10.72□□□□□ -0.69
SMPDL3A-201ENST00000368440 K7EQM0 130 aa10.72□□□□□ -0.69
SMPDL3A-201ENST00000368440 IGLV2-8P01709 118 aa10.72□□□□□ -0.69
SMPDL3A-201ENST00000368440 FLI1Q01543 452 aaPredicted RBP10.72□□□□□ -0.69
SMPDL3A-201ENST00000368440 Q6AWC8 147 aa10.72□□□□□ -0.69
SMPDL3A-201ENST00000368440 ZNF493Q6ZR52 646 aa10.72□□□□□ -0.69
SMPDL3A-201ENST00000368440 TMEM75Q8N9X5 138 aa10.72□□□□□ -0.69
SMPDL3A-201ENST00000368440 SFRP2Q96HF1 295 aa10.72□□□□□ -0.69
SMPDL3A-201ENST00000368440 RNASE7Q9H1E1 156 aaKnown RBP10.72□□□□□ -0.69
SMPDL3A-201ENST00000368440 TP53TG3Q9ULZ0 132 aa10.72□□□□□ -0.69
SMPDL3A-201ENST00000368440 LYSTQ99698 3801 aa10.72□□□□□ -0.69
SMPDL3A-201ENST00000368440 ERVFC1-1P60608 527 aa10.72□□□□□ -0.69
SMPDL3A-201ENST00000368440 MUC21Q5SSG8 566 aa10.72□□□□□ -0.69
SMPDL3A-201ENST00000368440 Q86TA4 180 aa10.72□□□□□ -0.69
SMPDL3A-201ENST00000368440 LINC00467Q9BRT7 94 aa10.72□□□□□ -0.69
SMPDL3A-201ENST00000368440 NOP10Q9NPE3 64 aaKnown RBP10.72□□□□□ -0.69
SMPDL3A-201ENST00000368440 KLF12Q9Y4X4 402 aa10.72□□□□□ -0.69
SMPDL3A-201ENST00000368440 IGHV1OR15-1A0A075B7D0 117 aa10.71□□□□□ -0.69
SMPDL3A-201ENST00000368440 TRAV10A0A0B4J240 114 aa10.71□□□□□ -0.69
SMPDL3A-201ENST00000368440 TEX48A0A1B0GUV7 120 aa10.71□□□□□ -0.69
SMPDL3A-201ENST00000368440 LYRM9A8MSI8 78 aa10.71□□□□□ -0.69
SMPDL3A-201ENST00000368440 CBY3A6NI87 242 aa10.7□□□□□ -0.7
SMPDL3A-201ENST00000368440 ZNF80P51504 273 aaPredicted RBP10.7□□□□□ -0.7
SMPDL3A-201ENST00000368440 DAD1P61803 113 aa10.7□□□□□ -0.7
SMPDL3A-201ENST00000368440 C11orf72Q8NBR9 251 aa10.7□□□□□ -0.7
SMPDL3A-201ENST00000368440 OR10G8Q8NGN5 311 aa10.7□□□□□ -0.7
SMPDL3A-201ENST00000368440 KLK5Q9Y337 293 aaPredicted RBP10.7□□□□□ -0.7
SMPDL3A-201ENST00000368440 TIMM8BQ9Y5J9 83 aaPredicted RBP10.7□□□□□ -0.7
SMPDL3A-201ENST00000368440 LY96Q9Y6Y9 160 aa10.7□□□□□ -0.7
SMPDL3A-201ENST00000368440 DEFB131BA0A096LNP1 70 aa10.7□□□□□ -0.7
SMPDL3A-201ENST00000368440 LTAP01374 205 aa10.7□□□□□ -0.7
SMPDL3A-201ENST00000368440 S100A9P06702 114 aaKnown RBP10.7□□□□□ -0.7
SMPDL3A-201ENST00000368440 DEFB130BP0DP73 79 aa10.7□□□□□ -0.7
SMPDL3A-201ENST00000368440 DEFB130AP0DP74 79 aa10.7□□□□□ -0.7
SMPDL3A-201ENST00000368440 ANXA2RQ3ZCQ2 193 aa10.7□□□□□ -0.7
SMPDL3A-201ENST00000368440 NDFIP1Q9BT67 221 aa10.7□□□□□ -0.7
SMPDL3A-201ENST00000368440 CTDSP1Q9GZU7 261 aa10.7□□□□□ -0.7
SMPDL3A-201ENST00000368440 GSN-AS1Q9NRJ2 163 aa10.7□□□□□ -0.7
SMPDL3A-201ENST00000368440 GCGP01275 180 aa10.69□□□□□ -0.7
SMPDL3A-201ENST00000368440 ANAPC16Q96DE5 110 aa10.69□□□□□ -0.7
SMPDL3A-201ENST00000368440 TGIF2-C20orf24A0A0A6YYL0 155 aa10.68□□□□□ -0.7
SMPDL3A-201ENST00000368440 SNURFLB1AK76 121 aa10.68□□□□□ -0.7
SMPDL3A-201ENST00000368440 HTN3P15516 51 aa10.68□□□□□ -0.7
SMPDL3A-201ENST00000368440 NAGKQ9UJ70 344 aa10.68□□□□□ -0.7
SMPDL3A-201ENST00000368440 COLCA2A8K830 154 aa10.68□□□□□ -0.7
SMPDL3A-201ENST00000368440 IGLL5B9A064 214 aa10.68□□□□□ -0.7
SMPDL3A-201ENST00000368440 IBA57Q5T440 356 aaKnown RBP10.68□□□□□ -0.7
SMPDL3A-201ENST00000368440 C15orf54Q8N8G6 183 aa10.68□□□□□ -0.7
SMPDL3A-201ENST00000368440 C11orf21Q9P2W6 132 aa10.68□□□□□ -0.7
SMPDL3A-201ENST00000368440 TRAV21A0A0B4J279 112 aa10.67□□□□□ -0.7
SMPDL3A-201ENST00000368440 FBLL1A6NHQ2 334 aaKnown RBP10.67□□□□□ -0.7
SMPDL3A-201ENST00000368440 FAM3BP58499 235 aaPredicted RBP10.67□□□□□ -0.7
SMPDL3A-201ENST00000368440 ELOBQ15370 118 aa10.67□□□□□ -0.7
SMPDL3A-201ENST00000368440 LCE6AA0A183 80 aa10.66□□□□□ -0.7
SMPDL3A-201ENST00000368440 PPP1R2P9O14990 202 aa10.66□□□□□ -0.7
SMPDL3A-201ENST00000368440 CXCL1P09341 107 aa10.66□□□□□ -0.7
SMPDL3A-201ENST00000368440 TCL1AP56279 114 aa10.66□□□□□ -0.7
SMPDL3A-201ENST00000368440 SMUG1Q53HV7 270 aa10.66□□□□□ -0.7
SMPDL3A-201ENST00000368440 FAM159AQ6UWV7 190 aa10.66□□□□□ -0.7
SMPDL3A-201ENST00000368440 Q6ZTI0 123 aa10.66□□□□□ -0.7
SMPDL3A-201ENST00000368440 TMEM183AQ8IXX5 376 aa10.66□□□□□ -0.7
SMPDL3A-201ENST00000368440 LINC00612Q8N6U2 182 aa10.66□□□□□ -0.7
SMPDL3A-201ENST00000368440 ZC2HC1AQ96GY0 325 aa10.66□□□□□ -0.7
SMPDL3A-201ENST00000368440 MLST8Q9BVC4 326 aa10.66□□□□□ -0.7
SMPDL3A-201ENST00000368440 TMEM242Q9NWH2 141 aa10.66□□□□□ -0.7
SMPDL3A-201ENST00000368440 MDFICQ9P1T7 246 aa10.66□□□□□ -0.7
SMPDL3A-201ENST00000368440 SACSQ9NZJ4 4579 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms