RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 TMEM97Q5BJF2 176 aa13.73□□□□□ -0.21
UBQLN4-201ENST00000368309 DOPEY2Q9Y3R5 2298 aa13.73□□□□□ -0.21
UBQLN4-201ENST00000368309 MSMBP08118 114 aa13.73□□□□□ -0.21
UBQLN4-201ENST00000368309 ZFAND2AQ8N6M9 145 aa13.73□□□□□ -0.21
UBQLN4-201ENST00000368309 Q8N8P6 123 aa13.73□□□□□ -0.21
UBQLN4-201ENST00000368309 OR1N2Q8NGR9 330 aa13.73□□□□□ -0.21
UBQLN4-201ENST00000368309 ATP6V0BQ99437 205 aa13.73□□□□□ -0.21
UBQLN4-201ENST00000368309 EDN2P20800 178 aa13.73□□□□□ -0.21
UBQLN4-201ENST00000368309 BOD1L2Q8IYS8 172 aa13.73□□□□□ -0.21
UBQLN4-201ENST00000368309 NRACQ8N912 160 aa13.73□□□□□ -0.21
UBQLN4-201ENST00000368309 ZFYVE26Q68DK2 2539 aa13.73□□□□□ -0.21
UBQLN4-201ENST00000368309 ZANQ9Y493 2812 aa13.73□□□□□ -0.21
UBQLN4-201ENST00000368309 IGLV2-18A0A075B6J9 118 aa13.72□□□□□ -0.21
UBQLN4-201ENST00000368309 TMEM95Q3KNT9 176 aa13.72□□□□□ -0.21
UBQLN4-201ENST00000368309 DPF1Q92782 380 aa13.72□□□□□ -0.21
UBQLN4-201ENST00000368309 LINC01546A6NGU7 62 aa13.72□□□□□ -0.21
UBQLN4-201ENST00000368309 OR4C5Q8NGB2 326 aa13.72□□□□□ -0.21
UBQLN4-201ENST00000368309 USMG5Q96IX5 58 aa13.72□□□□□ -0.21
UBQLN4-201ENST00000368309 LINC00477Q96M19 166 aa13.72□□□□□ -0.21
UBQLN4-201ENST00000368309 RHPN1-AS1Q9BWJ2 59 aa13.72□□□□□ -0.21
UBQLN4-201ENST00000368309 PPP1R14DQ9NXH3 145 aa13.72□□□□□ -0.21
UBQLN4-201ENST00000368309 SOCS3O14543 225 aa13.72□□□□□ -0.21
UBQLN4-201ENST00000368309 RNASE4P34096 147 aaKnown RBP13.72□□□□□ -0.21
UBQLN4-201ENST00000368309 FOXC2Q99958 501 aa13.72□□□□□ -0.21
UBQLN4-201ENST00000368309 FAM208BQ5VWN6 2430 aa13.71□□□□□ -0.21
UBQLN4-201ENST00000368309 CD5LO43866 347 aa13.71□□□□□ -0.21
UBQLN4-201ENST00000368309 SMIM17P0DL12 118 aa13.71□□□□□ -0.21
UBQLN4-201ENST00000368309 S100A4P26447 101 aaKnown RBP13.71□□□□□ -0.21
UBQLN4-201ENST00000368309 ODF1Q14990 250 aa13.71□□□□□ -0.21
UBQLN4-201ENST00000368309 AMMECR1LQ6DCA0 310 aa13.71□□□□□ -0.21
UBQLN4-201ENST00000368309 TTTY13Q9BZ97 58 aa13.71□□□□□ -0.21
UBQLN4-201ENST00000368309 C7orf71A4D174 169 aa13.7□□□□□ -0.22
UBQLN4-201ENST00000368309 NDUFS8O00217 210 aa13.7□□□□□ -0.22
UBQLN4-201ENST00000368309 A1L4Q6 167 aa13.7□□□□□ -0.22
UBQLN4-201ENST00000368309 WFDC12Q8WWY7 111 aa13.7□□□□□ -0.22
UBQLN4-201ENST00000368309 IGKV2D-26A0A0A0MRZ7 120 aa13.7□□□□□ -0.22
UBQLN4-201ENST00000368309 ANXA2RQ3ZCQ2 193 aa13.7□□□□□ -0.22
UBQLN4-201ENST00000368309 GNRH2O43555 120 aa13.69□□□□□ -0.22
UBQLN4-201ENST00000368309 HHLA3Q9XRX5 114 aa13.69□□□□□ -0.22
UBQLN4-201ENST00000368309 IGHV4-4A0A075B6R2 117 aa13.69□□□□□ -0.22
UBQLN4-201ENST00000368309 OVOL1O14753 267 aa13.69□□□□□ -0.22
UBQLN4-201ENST00000368309 LENEPQ9Y5L5 61 aa13.69□□□□□ -0.22
UBQLN4-201ENST00000368309 CREBBPQ92793 2442 aa13.68□□□□□ -0.22
UBQLN4-201ENST00000368309 TRAV21A0A0B4J279 112 aa13.68□□□□□ -0.22
UBQLN4-201ENST00000368309 LAGE3Q14657 143 aa13.68□□□□□ -0.22
UBQLN4-201ENST00000368309 C14orf178Q8N769 122 aaPredicted RBP13.68□□□□□ -0.22
UBQLN4-201ENST00000368309 SPOCK3Q9BQ16 436 aa13.68□□□□□ -0.22
UBQLN4-201ENST00000368309 TRAV8-6A0A0B4J262 113 aa13.68□□□□□ -0.22
UBQLN4-201ENST00000368309 GTSCR1Q86UQ5 136 aa13.67□□□□□ -0.22
UBQLN4-201ENST00000368309 RNASE8Q8TDE3 154 aaKnown RBP13.67□□□□□ -0.22
UBQLN4-201ENST00000368309 TMEM160Q9NX00 188 aa13.67□□□□□ -0.22
UBQLN4-201ENST00000368309 PHLDA3Q9Y5J5 127 aa13.67□□□□□ -0.22
UBQLN4-201ENST00000368309 C10orf99Q6UWK7 81 aa13.67□□□□□ -0.22
UBQLN4-201ENST00000368309 IGLV1-40P01703 118 aa13.67□□□□□ -0.22
UBQLN4-201ENST00000368309 TMEM8BA6NDV4 472 aa13.66□□□□□ -0.22
UBQLN4-201ENST00000368309 H3BUA1 57 aa13.66□□□□□ -0.22
UBQLN4-201ENST00000368309 MYOZ3Q8TDC0 251 aa13.66□□□□□ -0.22
UBQLN4-201ENST00000368309 A0A0G2JLM5 398 aa13.66□□□□□ -0.22
UBQLN4-201ENST00000368309 IGKCP01834 107 aa13.66□□□□□ -0.22
UBQLN4-201ENST00000368309 MAPK1IP1LQ8NDC0 245 aa13.66□□□□□ -0.22
UBQLN4-201ENST00000368309 NAA38Q9BRA0 125 aaKnown RBP13.66□□□□□ -0.22
UBQLN4-201ENST00000368309 ZMAT4Q9H898 229 aa13.66□□□□□ -0.22
UBQLN4-201ENST00000368309 DAZ1Q9NQZ3 744 aaKnown RBP13.66□□□□□ -0.22
UBQLN4-201ENST00000368309 B4DSR2 109 aa13.66□□□□□ -0.22
UBQLN4-201ENST00000368309 ASIPP42127 132 aa13.66□□□□□ -0.22
UBQLN4-201ENST00000368309 ADAMTSL5Q6ZMM2 481 aa13.66□□□□□ -0.22
UBQLN4-201ENST00000368309 SRSF1Q07955 248 aaKnown RBP eCLIP13.65□□□□□ -0.22
UBQLN4-201ENST00000368309 OR9G4Q8NGQ1 327 aa13.65□□□□□ -0.22
UBQLN4-201ENST00000368309 SORL1Q92673 2214 aa13.65□□□□□ -0.22
UBQLN4-201ENST00000368309 SEC11AP67812 179 aa13.65□□□□□ -0.22
UBQLN4-201ENST00000368309 ZC2HC1BQ5TFG8 222 aa13.65□□□□□ -0.22
UBQLN4-201ENST00000368309 RPL39LQ96EH5 51 aaKnown RBP13.65□□□□□ -0.22
UBQLN4-201ENST00000368309 MRPL35Q9NZE8 188 aaKnown RBP13.65□□□□□ -0.22
UBQLN4-201ENST00000368309 IGHV4-59P01825 116 aa13.65□□□□□ -0.23
UBQLN4-201ENST00000368309 LRRK2Q5S007 2527 aa13.64□□□□□ -0.23
UBQLN4-201ENST00000368309 MGPP08493 103 aa13.64□□□□□ -0.23
UBQLN4-201ENST00000368309 SMPXQ9UHP9 88 aa13.64□□□□□ -0.23
UBQLN4-201ENST00000368309 PEF1Q9UBV8 284 aaKnown RBP13.63□□□□□ -0.23
UBQLN4-201ENST00000368309 ATP5LO75964 103 aa13.63□□□□□ -0.23
UBQLN4-201ENST00000368309 DPM2O94777 84 aa13.63□□□□□ -0.23
UBQLN4-201ENST00000368309 BRI3O95415 125 aa13.63□□□□□ -0.23
UBQLN4-201ENST00000368309 RASL10AQ92737 203 aa13.63□□□□□ -0.23
UBQLN4-201ENST00000368309 RAB37Q96AX2 223 aa13.63□□□□□ -0.23
UBQLN4-201ENST00000368309 PRSS47A8MTI9 375 aa13.63□□□□□ -0.23
UBQLN4-201ENST00000368309 HSD52Q0P140 79 aa13.63□□□□□ -0.23
UBQLN4-201ENST00000368309 DEFB112Q30KQ8 113 aa13.63□□□□□ -0.23
UBQLN4-201ENST00000368309 MRAP2Q96G30 205 aa13.63□□□□□ -0.23
UBQLN4-201ENST00000368309 SMIM2Q9BVW6 85 aa13.63□□□□□ -0.23
UBQLN4-201ENST00000368309 K7EP13 123 aa13.62□□□□□ -0.23
UBQLN4-201ENST00000368309 DEFB104AQ8WTQ1 72 aa13.62□□□□□ -0.23
UBQLN4-201ENST00000368309 FAM19A4Q96LR4 140 aa13.62□□□□□ -0.23
UBQLN4-201ENST00000368309 ANKRD17O75179 2603 aaKnown RBP13.62□□□□□ -0.23
UBQLN4-201ENST00000368309 SIVA1O15304 175 aa13.62□□□□□ -0.23
UBQLN4-201ENST00000368309 RNASE3P12724 160 aaKnown RBP13.62□□□□□ -0.23
UBQLN4-201ENST00000368309 CFHR3Q02985 330 aa13.62□□□□□ -0.23
UBQLN4-201ENST00000368309 SUMO2P61956 95 aaKnown RBP13.61□□□□□ -0.23
UBQLN4-201ENST00000368309 DPH3P1Q9H4G8 78 aa13.61□□□□□ -0.23
UBQLN4-201ENST00000368309 ZNF462Q96JM2 2506 aa13.61□□□□□ -0.23
UBQLN4-201ENST00000368309 A6NDN8 102 aa13.61□□□□□ -0.23
UBQLN4-201ENST00000368309 FBN2P35556 2912 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms