RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 C11orf21Q9P2W6 132 aa10.28□□□□□ -0.76
SF3B5-201ENST00000367569 ARL2-SNX15V9GYD0 113 aa10.28□□□□□ -0.76
SF3B5-201ENST00000367569 DYNC1H1Q14204 4646 aaKnown RBP10.28□□□□□ -0.76
SF3B5-201ENST00000367569 TRAV21A0A0B4J279 112 aa10.27□□□□□ -0.77
SF3B5-201ENST00000367569 SERTM2A0A1B0GWG4 89 aa10.27□□□□□ -0.77
SF3B5-201ENST00000367569 GNRH2O43555 120 aa10.27□□□□□ -0.77
SF3B5-201ENST00000367569 TYMSP04818 313 aa10.27□□□□□ -0.77
SF3B5-201ENST00000367569 EIF5AP63241 154 aaKnown RBP10.27□□□□□ -0.77
SF3B5-201ENST00000367569 DAZ2Q13117 558 aaKnown RBP10.27□□□□□ -0.77
SF3B5-201ENST00000367569 C9orf62Q8N4C0 152 aa10.27□□□□□ -0.77
SF3B5-201ENST00000367569 TRAV26-1A0A087WT03 109 aa10.26□□□□□ -0.77
SF3B5-201ENST00000367569 UMAD1C9J7I0 102 aa10.26□□□□□ -0.77
SF3B5-201ENST00000367569 SPINK4O60575 86 aa10.26□□□□□ -0.77
SF3B5-201ENST00000367569 H2AFB1P0C5Y9 115 aa10.26□□□□□ -0.77
SF3B5-201ENST00000367569 ZFP69Q49AA0 526 aa10.26□□□□□ -0.77
SF3B5-201ENST00000367569 IBA57Q5T440 356 aaKnown RBP10.26□□□□□ -0.77
SF3B5-201ENST00000367569 ARL6IP6Q8N6S5 226 aa10.26□□□□□ -0.77
SF3B5-201ENST00000367569 NHLRC2Q8NBF2 726 aa10.26□□□□□ -0.77
SF3B5-201ENST00000367569 PKD1P98161 4303 aa10.26□□□□□ -0.77
SF3B5-201ENST00000367569 PCLOQ9Y6V0 5065 aa10.26□□□□□ -0.77
SF3B5-201ENST00000367569 IGLV2-18A0A075B6J9 118 aa10.25□□□□□ -0.77
SF3B5-201ENST00000367569 TRGV11A0A075B6L2 103 aa10.25□□□□□ -0.77
SF3B5-201ENST00000367569 SCO2A0A1W2PP80 73 aa10.25□□□□□ -0.77
SF3B5-201ENST00000367569 SFTA3P0C7M3 94 aa10.25□□□□□ -0.77
SF3B5-201ENST00000367569 CCL20P78556 96 aa10.25□□□□□ -0.77
SF3B5-201ENST00000367569 SMUG1Q53HV7 270 aa10.25□□□□□ -0.77
SF3B5-201ENST00000367569 MBD3L1Q8WWY6 194 aa10.25□□□□□ -0.77
SF3B5-201ENST00000367569 MUC4Q99102 2169 aa10.25□□□□□ -0.77
SF3B5-201ENST00000367569 IGHV3-16A0A0C4DH30 117 aa10.24□□□□□ -0.77
SF3B5-201ENST00000367569 M0R2N4 97 aa10.24□□□□□ -0.77
SF3B5-201ENST00000367569 P0DMU3 169 aa10.24□□□□□ -0.77
SF3B5-201ENST00000367569 FAM231AP0DMU4 169 aa10.24□□□□□ -0.77
SF3B5-201ENST00000367569 FAM231CP0DMU5 169 aa10.24□□□□□ -0.77
SF3B5-201ENST00000367569 AKR1C3P42330 323 aa10.24□□□□□ -0.77
SF3B5-201ENST00000367569 PPT1P50897 306 aa10.24□□□□□ -0.77
SF3B5-201ENST00000367569 POM121L12Q8N7R1 296 aa10.24□□□□□ -0.77
SF3B5-201ENST00000367569 ZC2HC1AQ96GY0 325 aa10.24□□□□□ -0.77
SF3B5-201ENST00000367569 FAM210BQ96KR6 192 aa10.24□□□□□ -0.77
SF3B5-201ENST00000367569 SDF2L1Q9HCN8 221 aa10.24□□□□□ -0.77
SF3B5-201ENST00000367569 GNG13Q9P2W3 67 aa10.24□□□□□ -0.77
SF3B5-201ENST00000367569 A0A1B0GVY2 172 aa10.23□□□□□ -0.77
SF3B5-201ENST00000367569 UBE2G1P62253 170 aa10.23□□□□□ -0.77
SF3B5-201ENST00000367569 DPPA3Q6W0C5 159 aa10.23□□□□□ -0.77
SF3B5-201ENST00000367569 M0R036 132 aa10.22□□□□□ -0.77
SF3B5-201ENST00000367569 PFN1P07737 140 aaKnown RBP10.22□□□□□ -0.77
SF3B5-201ENST00000367569 LINC00336Q6ZUF6 198 aa10.22□□□□□ -0.77
SF3B5-201ENST00000367569 SLC51BQ86UW2 128 aa10.22□□□□□ -0.77
SF3B5-201ENST00000367569 C15orf53Q8NAA6 179 aa10.22□□□□□ -0.77
SF3B5-201ENST00000367569 HIST1H2BAQ96A08 127 aa10.22□□□□□ -0.77
SF3B5-201ENST00000367569 BOLA1Q9Y3E2 137 aa10.22□□□□□ -0.77
SF3B5-201ENST00000367569 RYR1P21817 5038 aa10.21□□□□□ -0.77
SF3B5-201ENST00000367569 SULT1A2P50226 295 aa10.21□□□□□ -0.77
SF3B5-201ENST00000367569 TDRG1Q3Y452 100 aa10.21□□□□□ -0.77
SF3B5-201ENST00000367569 ZNF479Q96JC4 524 aa10.21□□□□□ -0.77
SF3B5-201ENST00000367569 TMSB15BA0A087X1C1 80 aa10.2□□□□□ -0.78
SF3B5-201ENST00000367569 C9JCJ5 164 aa10.2□□□□□ -0.78
SF3B5-201ENST00000367569 RTL8CO15255 209 aa10.2□□□□□ -0.78
SF3B5-201ENST00000367569 SH2D1AO60880 128 aa10.2□□□□□ -0.78
SF3B5-201ENST00000367569 SAPCD1Q5SSQ6 148 aa10.2□□□□□ -0.78
SF3B5-201ENST00000367569 ALKAL2Q6UX46 152 aa10.2□□□□□ -0.78
SF3B5-201ENST00000367569 FMC1Q96HJ9 113 aa10.2□□□□□ -0.78
SF3B5-201ENST00000367569 VSIG2Q96IQ7 327 aa10.2□□□□□ -0.78
SF3B5-201ENST00000367569 DERL1Q9BUN8 251 aa10.2□□□□□ -0.78
SF3B5-201ENST00000367569 NKX6-2Q9C056 277 aaPredicted RBP10.2□□□□□ -0.78
SF3B5-201ENST00000367569 A0A096LPF7 62 aa10.19□□□□□ -0.78
SF3B5-201ENST00000367569 IGKV3D-20A0A0C4DH25 116 aa10.19□□□□□ -0.78
SF3B5-201ENST00000367569 EIF5AL1Q6IS14 154 aaKnown RBP10.19□□□□□ -0.78
SF3B5-201ENST00000367569 KCNS1Q96KK3 526 aa10.19□□□□□ -0.78
SF3B5-201ENST00000367569 GRIFINA4D1Z8 144 aa10.18□□□□□ -0.78
SF3B5-201ENST00000367569 FBLL1A6NHQ2 334 aaKnown RBP10.18□□□□□ -0.78
SF3B5-201ENST00000367569 PRSS29PA6NIE9 313 aa10.18□□□□□ -0.78
SF3B5-201ENST00000367569 LTAP01374 205 aa10.18□□□□□ -0.78
SF3B5-201ENST00000367569 ORM1P02763 201 aa10.18□□□□□ -0.78
SF3B5-201ENST00000367569 CRIP1P50238 77 aa10.18□□□□□ -0.78
SF3B5-201ENST00000367569 FHL2Q14192 279 aa10.18□□□□□ -0.78
SF3B5-201ENST00000367569 LGALS9BQ3B8N2 356 aa10.18□□□□□ -0.78
SF3B5-201ENST00000367569 SPXQ9BT56 116 aa10.18□□□□□ -0.78
SF3B5-201ENST00000367569 LINC00588Q9Y4M8 146 aa10.18□□□□□ -0.78
SF3B5-201ENST00000367569 IGHV3-73A0A0B4J1V6 119 aa10.17□□□□□ -0.78
SF3B5-201ENST00000367569 TRGV4A0A0C4DH28 118 aa10.17□□□□□ -0.78
SF3B5-201ENST00000367569 B4DEV8 164 aa10.17□□□□□ -0.78
SF3B5-201ENST00000367569 H3BVH4 76 aa10.17□□□□□ -0.78
SF3B5-201ENST00000367569 M0R2P5 195 aa10.17□□□□□ -0.78
SF3B5-201ENST00000367569 RNASE3P12724 160 aaKnown RBP10.17□□□□□ -0.78
SF3B5-201ENST00000367569 RAB5CP51148 216 aa10.17□□□□□ -0.78
SF3B5-201ENST00000367569 C18orf15Q96N68 181 aa10.17□□□□□ -0.78
SF3B5-201ENST00000367569 MANBALQ9NQG1 85 aa10.17□□□□□ -0.78
SF3B5-201ENST00000367569 LOC100131303A0A0U1RQF7 123 aa10.16□□□□□ -0.78
SF3B5-201ENST00000367569 PGPEP1LA6NFU8 196 aa10.16□□□□□ -0.78
SF3B5-201ENST00000367569 PAX4O43316 350 aa10.16□□□□□ -0.78
SF3B5-201ENST00000367569 RPL19P84098 196 aaKnown RBP10.16□□□□□ -0.78
SF3B5-201ENST00000367569 ZNF506Q5JVG8 444 aa10.16□□□□□ -0.78
SF3B5-201ENST00000367569 PRR27Q6MZM9 219 aa10.16□□□□□ -0.78
SF3B5-201ENST00000367569 OR4C5Q8NGB2 326 aa10.16□□□□□ -0.78
SF3B5-201ENST00000367569 RASL10AQ92737 203 aa10.16□□□□□ -0.78
SF3B5-201ENST00000367569 C9orf85Q96MD7 179 aa10.16□□□□□ -0.78
SF3B5-201ENST00000367569 TCEAL7Q9BRU2 100 aa10.16□□□□□ -0.78
SF3B5-201ENST00000367569 FABP5P3A8MUU1 101 aa10.15□□□□□ -0.78
SF3B5-201ENST00000367569 S100A4P26447 101 aaKnown RBP10.15□□□□□ -0.78
SF3B5-201ENST00000367569 ASIPP42127 132 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms