RNA–Protein interactions for RNA: ENST00000366856.3

CNIH4-201, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CNIH4, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-201ENST00000366856 PCDH15Q96QU1 1955 aa1.61□□□□□ -2.15
CNIH4-201ENST00000366856 COL11A1P12107 1806 aaPredicted RBP1.61□□□□□ -2.15
CNIH4-201ENST00000366856 TET3O43151 1660 aa1.61□□□□□ -2.15
CNIH4-201ENST00000366856 FAM208AQ9UK61 1670 aaKnown RBP1.61□□□□□ -2.15
CNIH4-201ENST00000366856 ABCC1P33527 1531 aa1.61□□□□□ -2.15
CNIH4-201ENST00000366856 ZFYVE16Q7Z3T8 1539 aa1.61□□□□□ -2.15
CNIH4-201ENST00000366856 RGPD1P0DJD0 1748 aa1.61□□□□□ -2.15
CNIH4-201ENST00000366856 IGKV3-7A0A075B6H7 116 aa1.61□□□□□ -2.15
CNIH4-201ENST00000366856 IGKV2-40A0A087WW87 121 aaPredicted RBP1.61□□□□□ -2.15
CNIH4-201ENST00000366856 A0A096LPI6 279 aa1.61□□□□□ -2.15
CNIH4-201ENST00000366856 H3BRM9 83 aa1.61□□□□□ -2.15
CNIH4-201ENST00000366856 NUPR1O60356 82 aa1.61□□□□□ -2.15
CNIH4-201ENST00000366856 DNAL4O96015 105 aa1.61□□□□□ -2.15
CNIH4-201ENST00000366856 IGKV2D-40P01614 121 aaPredicted RBP1.61□□□□□ -2.15
CNIH4-201ENST00000366856 ZNF25P17030 456 aaPredicted RBP1.61□□□□□ -2.15
CNIH4-201ENST00000366856 CASC2Q6XLA1 102 aa1.61□□□□□ -2.15
CNIH4-201ENST00000366856 OR8J3Q8NGG0 315 aa1.61□□□□□ -2.15
CNIH4-201ENST00000366856 TCEAL4Q96EI5 215 aa1.61□□□□□ -2.15
CNIH4-201ENST00000366856 ZFP30Q9Y2G7 519 aa1.61□□□□□ -2.15
CNIH4-201ENST00000366856 DEPDC5O75140 1603 aa1.61□□□□□ -2.15
CNIH4-201ENST00000366856 ATP10BO94823 1461 aa1.61□□□□□ -2.15
CNIH4-201ENST00000366856 MAGI1Q96QZ7 1491 aaPredicted RBP1.61□□□□□ -2.15
CNIH4-201ENST00000366856 IFT140Q96RY7 1462 aa1.61□□□□□ -2.15
CNIH4-201ENST00000366856 CLTCQ00610 1675 aaKnown RBP1.61□□□□□ -2.15
CNIH4-201ENST00000366856 CR1P17927 2039 aa1.61□□□□□ -2.15
CNIH4-201ENST00000366856 TRPM2O94759 1503 aa1.61□□□□□ -2.15
CNIH4-201ENST00000366856 CPDO75976 1380 aa1.6□□□□□ -2.15
CNIH4-201ENST00000366856 FMN2Q9NZ56 1722 aa1.6□□□□□ -2.15
CNIH4-201ENST00000366856 PTPRGP23470 1445 aa1.6□□□□□ -2.15
CNIH4-201ENST00000366856 USP32Q8NFA0 1604 aa1.6□□□□□ -2.15
CNIH4-201ENST00000366856 TRBV6-7A0A0A0MS04 114 aa1.6□□□□□ -2.15
CNIH4-201ENST00000366856 IGKV2-29A2NJV5 120 aaPredicted RBP1.6□□□□□ -2.15
CNIH4-201ENST00000366856 CD14P08571 375 aa1.6□□□□□ -2.15
CNIH4-201ENST00000366856 COX4I1P13073 169 aa1.6□□□□□ -2.15
CNIH4-201ENST00000366856 AKR1D1P51857 326 aa1.6□□□□□ -2.15
CNIH4-201ENST00000366856 SNRPD3P62318 126 aaKnown RBP1.6□□□□□ -2.15
CNIH4-201ENST00000366856 TMEM91Q6ZNR0 172 aa1.6□□□□□ -2.15
CNIH4-201ENST00000366856 DEFB119Q8N690 84 aa1.6□□□□□ -2.15
CNIH4-201ENST00000366856 OBSCN-AS1Q96MR7 158 aa1.6□□□□□ -2.15
CNIH4-201ENST00000366856 XIRP1Q702N8 1843 aaKnown RBP1.6□□□□□ -2.15
CNIH4-201ENST00000366856 MED14O60244 1454 aa1.6□□□□□ -2.15
CNIH4-201ENST00000366856 COL4A1P02462 1669 aa1.6□□□□□ -2.15
CNIH4-201ENST00000366856 ITSN1Q15811 1721 aa1.6□□□□□ -2.15
CNIH4-201ENST00000366856 LAMB2P55268 1798 aa1.59□□□□□ -2.15
CNIH4-201ENST00000366856 SORL1Q92673 2214 aa1.59□□□□□ -2.15
CNIH4-201ENST00000366856 PIK3C2BO00750 1634 aa1.59□□□□□ -2.15
CNIH4-201ENST00000366856 ABCA9Q8IUA7 1624 aa1.59□□□□□ -2.15
CNIH4-201ENST00000366856 NCOA3Q9Y6Q9 1424 aa1.59□□□□□ -2.15
CNIH4-201ENST00000366856 FER1L6Q2WGJ9 1857 aa1.59□□□□□ -2.15
CNIH4-201ENST00000366856 ERCC6Q03468 1493 aa1.59□□□□□ -2.15
CNIH4-201ENST00000366856 GEMIN2O14893 280 aaKnown RBP1.59□□□□□ -2.15
CNIH4-201ENST00000366856 SMIM24O75264 130 aa1.59□□□□□ -2.15
CNIH4-201ENST00000366856 EVI2AP22794 236 aa1.59□□□□□ -2.15
CNIH4-201ENST00000366856 PCBD1P61457 104 aa1.59□□□□□ -2.15
CNIH4-201ENST00000366856 GLYATL3Q5SZD4 288 aa1.59□□□□□ -2.15
CNIH4-201ENST00000366856 OTOSQ8NHW6 89 aa1.59□□□□□ -2.15
CNIH4-201ENST00000366856 MPC1Q9Y5U8 109 aa1.59□□□□□ -2.15
CNIH4-201ENST00000366856 COL24A1Q17RW2 1714 aa1.59□□□□□ -2.16
CNIH4-201ENST00000366856 PEAK1Q9H792 1746 aa1.59□□□□□ -2.16
CNIH4-201ENST00000366856 ABCC3O15438 1527 aa1.59□□□□□ -2.16
CNIH4-201ENST00000366856 ATP7AQ04656 1500 aa1.59□□□□□ -2.16
CNIH4-201ENST00000366856 EFCAB6Q5THR3 1501 aa1.59□□□□□ -2.16
CNIH4-201ENST00000366856 KIDINS220Q9ULH0 1771 aa1.59□□□□□ -2.16
CNIH4-201ENST00000366856 CDC42BPGQ6DT37 1551 aa1.59□□□□□ -2.16
CNIH4-201ENST00000366856 PPIP5K1Q6PFW1 1433 aa1.58□□□□□ -2.16
CNIH4-201ENST00000366856 ARFGEF3Q5TH69 2177 aa1.58□□□□□ -2.16
CNIH4-201ENST00000366856 INTS1Q8N201 2190 aaKnown RBP1.58□□□□□ -2.16
CNIH4-201ENST00000366856 COL1A1P02452 1464 aaPredicted RBP1.58□□□□□ -2.16
CNIH4-201ENST00000366856 ZNF518AQ6AHZ1 1483 aa1.58□□□□□ -2.16
CNIH4-201ENST00000366856 XRN1Q8IZH2 1706 aaKnown RBP1.58□□□□□ -2.16
CNIH4-201ENST00000366856 POLEQ07864 2286 aa1.58□□□□□ -2.16
CNIH4-201ENST00000366856 RGPD2P0DJD1 1756 aa1.58□□□□□ -2.16
CNIH4-201ENST00000366856 NEXMIFQ5QGS0 1516 aa1.58□□□□□ -2.16
CNIH4-201ENST00000366856 UQCRHLA0A096LP55 91 aa1.58□□□□□ -2.16
CNIH4-201ENST00000366856 KLF7O75840 302 aaPredicted RBP1.58□□□□□ -2.16
CNIH4-201ENST00000366856 PRB1P04280 392 aa1.58□□□□□ -2.16
CNIH4-201ENST00000366856 UQCRHP07919 91 aa1.58□□□□□ -2.16
CNIH4-201ENST00000366856 HLA-DRB4P13762 266 aa1.58□□□□□ -2.16
CNIH4-201ENST00000366856 HIST1H1BP16401 226 aaKnown RBP1.58□□□□□ -2.16
CNIH4-201ENST00000366856 CKS2P33552 79 aa1.58□□□□□ -2.16
CNIH4-201ENST00000366856 ETV6P41212 452 aa1.58□□□□□ -2.16
CNIH4-201ENST00000366856 CCDC58Q4VC31 144 aa1.58□□□□□ -2.16
CNIH4-201ENST00000366856 TSTD1Q8NFU3 115 aa1.58□□□□□ -2.16
CNIH4-201ENST00000366856 C10orf105Q8TEF2 133 aa1.58□□□□□ -2.16
CNIH4-201ENST00000366856 MAGOHBQ96A72 148 aaKnown RBP1.58□□□□□ -2.16
CNIH4-201ENST00000366856 CIB3Q96Q77 187 aaPredicted RBP1.58□□□□□ -2.16
CNIH4-201ENST00000366856 COMMD3Q9UBI1 195 aa1.58□□□□□ -2.16
CNIH4-201ENST00000366856 DNAJC15Q9Y5T4 150 aa1.58□□□□□ -2.16
CNIH4-201ENST00000366856 HLA-DRB4X5D2U9 266 aa1.58□□□□□ -2.16
CNIH4-201ENST00000366856 MAP2P11137 1827 aaKnown RBP1.58□□□□□ -2.16
CNIH4-201ENST00000366856 ADGRB1O14514 1584 aa1.58□□□□□ -2.16
CNIH4-201ENST00000366856 FREM3P0C091 2139 aa1.58□□□□□ -2.16
CNIH4-201ENST00000366856 MON2Q7Z3U7 1717 aa1.57□□□□□ -2.16
CNIH4-201ENST00000366856 CD163L1Q9NR16 1453 aa1.57□□□□□ -2.16
CNIH4-201ENST00000366856 RGPD8O14715 1765 aaPredicted RBP1.57□□□□□ -2.16
CNIH4-201ENST00000366856 AKAP12Q02952 1782 aa1.57□□□□□ -2.16
CNIH4-201ENST00000366856 MYOFQ9NZM1 2061 aa1.57□□□□□ -2.16
CNIH4-201ENST00000366856 CPS1P31327 1500 aa1.57□□□□□ -2.16
CNIH4-201ENST00000366856 NRKQ7Z2Y5 1582 aa1.57□□□□□ -2.16
CNIH4-201ENST00000366856 M0R2Z0 102 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms