RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 MT-ND6P03923 174 aa-0.9□□□□□ -2.55
RNU4-28P-201ENST00000364739 RGS21Q2M5E4 152 aa-0.9□□□□□ -2.55
RNU4-28P-201ENST00000364739 HACD4Q5VWC8 232 aa-0.9□□□□□ -2.55
RNU4-28P-201ENST00000364739 GRPEL2Q8TAA5 225 aa-0.9□□□□□ -2.55
RNU4-28P-201ENST00000364739 UTP20O75691 2785 aaKnown RBP-0.9□□□□□ -2.55
RNU4-28P-201ENST00000364739 ACACBO00763 2458 aa-0.9□□□□□ -2.55
RNU4-28P-201ENST00000364739 NBASA2RRP1 2371 aa-0.9□□□□□ -2.55
RNU4-28P-201ENST00000364739 PRKDCP78527 4128 aaKnown RBP-0.9□□□□□ -2.55
RNU4-28P-201ENST00000364739 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.9□□□□□ -2.55
RNU4-28P-201ENST00000364739 CAMSAP2Q08AD1 1489 aa-0.91□□□□□ -2.55
RNU4-28P-201ENST00000364739 DOPEY2Q9Y3R5 2298 aa-0.91□□□□□ -2.55
RNU4-28P-201ENST00000364739 TRRAPQ9Y4A5 3859 aa-0.91□□□□□ -2.55
RNU4-28P-201ENST00000364739 CSMD2Q7Z408 3487 aa-0.91□□□□□ -2.56
RNU4-28P-201ENST00000364739 RIIAD1A6NNX1 92 aa-0.91□□□□□ -2.56
RNU4-28P-201ENST00000364739 OGNP20774 298 aaKnown RBP-0.91□□□□□ -2.56
RNU4-28P-201ENST00000364739 MT1HP80294 61 aa-0.91□□□□□ -2.56
RNU4-28P-201ENST00000364739 Q5XG85 94 aa-0.91□□□□□ -2.56
RNU4-28P-201ENST00000364739 AP1S3Q96PC3 154 aa-0.91□□□□□ -2.56
RNU4-28P-201ENST00000364739 PRNDQ9UKY0 176 aa-0.91□□□□□ -2.56
RNU4-28P-201ENST00000364739 ARL2BPQ9Y2Y0 163 aa-0.91□□□□□ -2.56
RNU4-28P-201ENST00000364739 CAMSAP1Q5T5Y3 1602 aa-0.91□□□□□ -2.56
RNU4-28P-201ENST00000364739 MAP2P11137 1827 aaKnown RBP-0.92□□□□□ -2.56
RNU4-28P-201ENST00000364739 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.92□□□□□ -2.56
RNU4-28P-201ENST00000364739 DMXL1Q9Y485 3027 aa-0.92□□□□□ -2.56
RNU4-28P-201ENST00000364739 C3orf85A0A1B0GTC6 90 aa-0.92□□□□□ -2.56
RNU4-28P-201ENST00000364739 CST7O76096 145 aa-0.92□□□□□ -2.56
RNU4-28P-201ENST00000364739 PHB2Q99623 299 aa-0.92□□□□□ -2.56
RNU4-28P-201ENST00000364739 PARVGQ9HBI0 331 aa-0.92□□□□□ -2.56
RNU4-28P-201ENST00000364739 TRIOO75962 3097 aa-0.92□□□□□ -2.56
RNU4-28P-201ENST00000364739 ANKRD31Q8N7Z5 1873 aa-0.92□□□□□ -2.56
RNU4-28P-201ENST00000364739 SPG11Q96JI7 2443 aa-0.93□□□□□ -2.56
RNU4-28P-201ENST00000364739 MED13LQ71F56 2210 aa-0.93□□□□□ -2.56
RNU4-28P-201ENST00000364739 TLN2Q9Y4G6 2542 aa-0.93□□□□□ -2.56
RNU4-28P-201ENST00000364739 ATP5HO75947 161 aa-0.93□□□□□ -2.56
RNU4-28P-201ENST00000364739 CFDP00746 253 aaPredicted RBP-0.93□□□□□ -2.56
RNU4-28P-201ENST00000364739 MT1AP04731 61 aa-0.93□□□□□ -2.56
RNU4-28P-201ENST00000364739 GYPBP06028 91 aa-0.93□□□□□ -2.56
RNU4-28P-201ENST00000364739 SCGB2B2Q4G0G5 96 aa-0.93□□□□□ -2.56
RNU4-28P-201ENST00000364739 C1orf140Q5VVS0 124 aa-0.93□□□□□ -2.56
RNU4-28P-201ENST00000364739 TAF9BQ9HBM6 251 aa-0.93□□□□□ -2.56
RNU4-28P-201ENST00000364739 LINC00846Q9NV44 126 aa-0.93□□□□□ -2.56
RNU4-28P-201ENST00000364739 MYH3P11055 1940 aa-0.93□□□□□ -2.56
RNU4-28P-201ENST00000364739 ZFHX3Q15911 3703 aa-0.94□□□□□ -2.56
RNU4-28P-201ENST00000364739 H7C1C5 153 aa-0.94□□□□□ -2.56
RNU4-28P-201ENST00000364739 AIPO00170 330 aa-0.94□□□□□ -2.56
RNU4-28P-201ENST00000364739 FABP4P15090 132 aa-0.94□□□□□ -2.56
RNU4-28P-201ENST00000364739 RPL35P42766 123 aaKnown RBP-0.94□□□□□ -2.56
RNU4-28P-201ENST00000364739 LCN6P62502 163 aa-0.94□□□□□ -2.56
RNU4-28P-201ENST00000364739 MT1XP80297 61 aa-0.94□□□□□ -2.56
RNU4-28P-201ENST00000364739 PYCARDQ9ULZ3 195 aa-0.94□□□□□ -2.56
RNU4-28P-201ENST00000364739 PRUNE2Q8WUY3 3088 aa-0.94□□□□□ -2.56
RNU4-28P-201ENST00000364739 AKAP6Q13023 2319 aa-0.94□□□□□ -2.56
RNU4-28P-201ENST00000364739 RTL9Q8NET4 1388 aa-0.95□□□□□ -2.56
RNU4-28P-201ENST00000364739 K7EQZ3 153 aa-0.95□□□□□ -2.56
RNU4-28P-201ENST00000364739 PHF5AQ7RTV0 110 aaKnown RBP-0.95□□□□□ -2.56
RNU4-28P-201ENST00000364739 OR2H1Q9GZK4 316 aa-0.95□□□□□ -2.56
RNU4-28P-201ENST00000364739 SS18L2Q9UHA2 77 aa-0.95□□□□□ -2.56
RNU4-28P-201ENST00000364739 PDE4DIPQ5VU43 2346 aa-0.95□□□□□ -2.56
RNU4-28P-201ENST00000364739 REV3LO60673 3130 aa-0.95□□□□□ -2.56
RNU4-28P-201ENST00000364739 KIAA0100Q14667 2235 aaKnown RBP-0.96□□□□□ -2.56
RNU4-28P-201ENST00000364739 ATMQ13315 3056 aa-0.96□□□□□ -2.56
RNU4-28P-201ENST00000364739 RREB1Q92766 1687 aa-0.96□□□□□ -2.56
RNU4-28P-201ENST00000364739 LOC730098B7Z3J9 87 aa-0.96□□□□□ -2.56
RNU4-28P-201ENST00000364739 CTXN2P0C2S0 81 aa-0.96□□□□□ -2.56
RNU4-28P-201ENST00000364739 MT1MQ8N339 61 aa-0.96□□□□□ -2.56
RNU4-28P-201ENST00000364739 MRPL35Q9NZE8 188 aaKnown RBP-0.96□□□□□ -2.56
RNU4-28P-201ENST00000364739 FRYQ5TBA9 3013 aa-0.96□□□□□ -2.56
RNU4-28P-201ENST00000364739 KIAA1107Q9UPP5 1409 aa-0.97□□□□□ -2.56
RNU4-28P-201ENST00000364739 CENPEQ02224 2701 aa-0.97□□□□□ -2.56
RNU4-28P-201ENST00000364739 COL14A1Q05707 1796 aaKnown RBP-0.97□□□□□ -2.56
RNU4-28P-201ENST00000364739 APOA2P02652 100 aa-0.97□□□□□ -2.56
RNU4-28P-201ENST00000364739 MT2AP02795 61 aa-0.97□□□□□ -2.56
RNU4-28P-201ENST00000364739 SPAG11BQ08648 103 aa-0.97□□□□□ -2.56
RNU4-28P-201ENST00000364739 FKBP1CQ5VVH2 108 aa-0.97□□□□□ -2.56
RNU4-28P-201ENST00000364739 DEFB132Q7Z7B7 95 aa-0.97□□□□□ -2.56
RNU4-28P-201ENST00000364739 OR5AK2Q8NH90 309 aa-0.97□□□□□ -2.56
RNU4-28P-201ENST00000364739 CCL4L1Q8NHW4 92 aa-0.97□□□□□ -2.56
RNU4-28P-201ENST00000364739 SSR3Q9UNL2 185 aa-0.97□□□□□ -2.56
RNU4-28P-201ENST00000364739 BPTFQ12830 3046 aa-0.97□□□□□ -2.57
RNU4-28P-201ENST00000364739 F5P12259 2224 aa-0.97□□□□□ -2.57
RNU4-28P-201ENST00000364739 ADGBQ8N7X0 1667 aa-0.97□□□□□ -2.57
RNU4-28P-201ENST00000364739 SPTBN1Q01082 2364 aaKnown RBP-0.98□□□□□ -2.57
RNU4-28P-201ENST00000364739 A0A1W2PPB8 328 aa-0.98□□□□□ -2.57
RNU4-28P-201ENST00000364739 KIR3DP1A8MWS1 328 aa-0.98□□□□□ -2.57
RNU4-28P-201ENST00000364739 H0YAA0 97 aa-0.98□□□□□ -2.57
RNU4-28P-201ENST00000364739 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.98□□□□□ -2.57
RNU4-28P-201ENST00000364739 IQSEC2Q5JU85 1478 aa-0.99□□□□□ -2.57
RNU4-28P-201ENST00000364739 PKDREJQ9NTG1 2253 aa-0.99□□□□□ -2.57
RNU4-28P-201ENST00000364739 CSPG4Q6UVK1 2322 aa-0.99□□□□□ -2.57
RNU4-28P-201ENST00000364739 DNAH17Q9UFH2 4485 aa-0.99□□□□□ -2.57
RNU4-28P-201ENST00000364739 TRANK1O15050 2925 aa-0.99□□□□□ -2.57
RNU4-28P-201ENST00000364739 ATG12O94817 140 aa-0.99□□□□□ -2.57
RNU4-28P-201ENST00000364739 MT1GP13640 62 aa-0.99□□□□□ -2.57
RNU4-28P-201ENST00000364739 DEFB112Q30KQ8 113 aa-0.99□□□□□ -2.57
RNU4-28P-201ENST00000364739 DEFB109BQ30KR1 87 aa-0.99□□□□□ -2.57
RNU4-28P-201ENST00000364739 AKR1C8PQ5T2L2 129 aa-0.99□□□□□ -2.57
RNU4-28P-201ENST00000364739 IZUMO2Q6UXV1 221 aa-0.99□□□□□ -2.57
RNU4-28P-201ENST00000364739 C3orf62Q6ZUJ4 267 aa-0.99□□□□□ -2.57
RNU4-28P-201ENST00000364739 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.99□□□□□ -2.57
RNU4-28P-201ENST00000364739 CLEC2BQ92478 149 aa-0.99□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms