RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 IGHV3-30-5P0DP03 117 aa8.63□□□□□ -1.03
CLIP1-203ENST00000361654 hDV102S1A0JD36 115 aa8.62□□□□□ -1.03
CLIP1-203ENST00000361654 WT1P19544 449 aaPredicted RBP8.62□□□□□ -1.03
CLIP1-203ENST00000361654 CFHR4Q92496 578 aa8.62□□□□□ -1.03
CLIP1-203ENST00000361654 C3orf79P0CE67 100 aa8.62□□□□□ -1.03
CLIP1-203ENST00000361654 POU2AF1Q16633 256 aa8.62□□□□□ -1.03
CLIP1-203ENST00000361654 RBAKDNA6NC62 111 aa8.61□□□□□ -1.03
CLIP1-203ENST00000361654 ZNF491Q8N8L2 437 aa8.61□□□□□ -1.03
CLIP1-203ENST00000361654 TIMM17AQ99595 171 aa8.61□□□□□ -1.03
CLIP1-203ENST00000361654 SLC25A29Q8N8R3 303 aa8.61□□□□□ -1.03
CLIP1-203ENST00000361654 CTSZQ9UBR2 303 aa8.61□□□□□ -1.03
CLIP1-203ENST00000361654 IGLL5B9A064 214 aa8.61□□□□□ -1.03
CLIP1-203ENST00000361654 COX7A2LO14548 114 aa8.61□□□□□ -1.03
CLIP1-203ENST00000361654 CRYGCP07315 174 aa8.61□□□□□ -1.03
CLIP1-203ENST00000361654 FUSP35637 526 aaKnown RBP eCLIP8.61□□□□□ -1.03
CLIP1-203ENST00000361654 UTF1Q5T230 341 aa8.61□□□□□ -1.03
CLIP1-203ENST00000361654 MRPL51Q4U2R6 128 aaKnown RBP8.61□□□□□ -1.03
CLIP1-203ENST00000361654 AJUBAQ96IF1 538 aa8.61□□□□□ -1.03
CLIP1-203ENST00000361654 POLR3KQ9Y2Y1 108 aaPredicted RBP8.61□□□□□ -1.03
CLIP1-203ENST00000361654 K7EQD1 137 aa8.6□□□□□ -1.03
CLIP1-203ENST00000361654 BOD1L2Q8IYS8 172 aa8.6□□□□□ -1.03
CLIP1-203ENST00000361654 NRGNQ92686 78 aa8.6□□□□□ -1.03
CLIP1-203ENST00000361654 THSD7BQ9C0I4 1608 aa8.6□□□□□ -1.03
CLIP1-203ENST00000361654 TRBV20-1A0A075B6N2 111 aa8.6□□□□□ -1.03
CLIP1-203ENST00000361654 HERV-K104P63124 156 aa8.6□□□□□ -1.03
CLIP1-203ENST00000361654 SHISA2Q6UWI4 295 aa8.6□□□□□ -1.03
CLIP1-203ENST00000361654 BLCAPP62952 87 aa8.6□□□□□ -1.03
CLIP1-203ENST00000361654 DAZ2Q13117 558 aaKnown RBP8.6□□□□□ -1.03
CLIP1-203ENST00000361654 DIAPH2-AS1Q14236 149 aa8.6□□□□□ -1.03
CLIP1-203ENST00000361654 DAZ4Q86SG3 579 aaKnown RBP8.6□□□□□ -1.03
CLIP1-203ENST00000361654 DAZ3Q9NR90 486 aaKnown RBP8.6□□□□□ -1.03
CLIP1-203ENST00000361654 SPANXA1Q9NS26 97 aa8.6□□□□□ -1.03
CLIP1-203ENST00000361654 ZFP36P26651 326 aaKnown RBP8.6□□□□□ -1.03
CLIP1-203ENST00000361654 LOXL1Q08397 574 aaPredicted RBP8.6□□□□□ -1.03
CLIP1-203ENST00000361654 DEFB105AQ8NG35 78 aa8.6□□□□□ -1.03
CLIP1-203ENST00000361654 NPBQ8NG41 125 aa8.6□□□□□ -1.03
CLIP1-203ENST00000361654 MPDZO75970 2070 aa8.59□□□□□ -1.03
CLIP1-203ENST00000361654 ZNF503-AS2A6NEH8 195 aa8.59□□□□□ -1.03
CLIP1-203ENST00000361654 MAJINQ3KP22 176 aa8.59□□□□□ -1.03
CLIP1-203ENST00000361654 PRSS57Q6UWY2 283 aa8.59□□□□□ -1.03
CLIP1-203ENST00000361654 FAM231DQ6ZW35 169 aa8.59□□□□□ -1.03
CLIP1-203ENST00000361654 MGAMO43451 1857 aa8.59□□□□□ -1.03
CLIP1-203ENST00000361654 HIVEP2P31629 2446 aa8.59□□□□□ -1.03
CLIP1-203ENST00000361654 FHL1Q13642 323 aa8.59□□□□□ -1.03
CLIP1-203ENST00000361654 C4orf3Q8WVX3 66 aa8.59□□□□□ -1.03
CLIP1-203ENST00000361654 NDUFA1O15239 70 aa8.59□□□□□ -1.03
CLIP1-203ENST00000361654 IGHG4P01861 327 aa8.59□□□□□ -1.03
CLIP1-203ENST00000361654 DEFB135Q30KP9 77 aa8.59□□□□□ -1.03
CLIP1-203ENST00000361654 TSC2P49815 1807 aa8.59□□□□□ -1.03
CLIP1-203ENST00000361654 TRAV26-2A0A0B4J265 109 aa8.59□□□□□ -1.03
CLIP1-203ENST00000361654 F6UB75 175 aa8.59□□□□□ -1.03
CLIP1-203ENST00000361654 K7EMI3 77 aa8.59□□□□□ -1.03
CLIP1-203ENST00000361654 YLPM1P49750 1951 aaKnown RBP8.59□□□□□ -1.03
CLIP1-203ENST00000361654 ZNF407Q9C0G0 2248 aa8.59□□□□□ -1.03
CLIP1-203ENST00000361654 WDR81Q562E7 1941 aa8.59□□□□□ -1.04
CLIP1-203ENST00000361654 SPINK8P0C7L1 97 aa8.59□□□□□ -1.04
CLIP1-203ENST00000361654 KIAA2026Q5HYC2 2103 aa8.58□□□□□ -1.04
CLIP1-203ENST00000361654 A0A087X0K7 114 aa8.58□□□□□ -1.04
CLIP1-203ENST00000361654 KIR3DS1Q14943 382 aa8.58□□□□□ -1.04
CLIP1-203ENST00000361654 AMTNQ6UX39 209 aa8.58□□□□□ -1.04
CLIP1-203ENST00000361654 MRPL52Q86TS9 123 aaKnown RBP8.58□□□□□ -1.04
CLIP1-203ENST00000361654 UBE2V1Q13404 147 aa8.58□□□□□ -1.04
CLIP1-203ENST00000361654 BVES-AS1Q5T3Y7 98 aa8.58□□□□□ -1.04
CLIP1-203ENST00000361654 K7EMT4 169 aa8.58□□□□□ -1.04
CLIP1-203ENST00000361654 ADAMTSL5Q6ZMM2 481 aa8.58□□□□□ -1.04
CLIP1-203ENST00000361654 NDUFA11Q86Y39 141 aa8.58□□□□□ -1.04
CLIP1-203ENST00000361654 AGPAT4-IT1Q9H0P7 198 aa8.58□□□□□ -1.04
CLIP1-203ENST00000361654 IGHV4OR15-8A0A075B7B6 117 aa8.57□□□□□ -1.04
CLIP1-203ENST00000361654 A0A087WW49 117 aa8.57□□□□□ -1.04
CLIP1-203ENST00000361654 IGHV7-81A0A0B4J1V7 117 aa8.57□□□□□ -1.04
CLIP1-203ENST00000361654 C5orf38Q86SI9 138 aa8.57□□□□□ -1.04
CLIP1-203ENST00000361654 C11orf45Q8TAV5 145 aa8.57□□□□□ -1.04
CLIP1-203ENST00000361654 SPANXDQ9BXN6 97 aa8.57□□□□□ -1.04
CLIP1-203ENST00000361654 HHLA3Q9XRX5 114 aa8.57□□□□□ -1.04
CLIP1-203ENST00000361654 C2orf70A6NJV1 201 aa8.57□□□□□ -1.04
CLIP1-203ENST00000361654 J3QQQ9 107 aa8.57□□□□□ -1.04
CLIP1-203ENST00000361654 NAA38Q9BRA0 125 aaKnown RBP8.57□□□□□ -1.04
CLIP1-203ENST00000361654 TRAV4A0A0B4J268 109 aa8.56□□□□□ -1.04
CLIP1-203ENST00000361654 F8VRH5 84 aa8.56□□□□□ -1.04
CLIP1-203ENST00000361654 GNRH2O43555 120 aa8.56□□□□□ -1.04
CLIP1-203ENST00000361654 FBXL19-AS1Q494R0 122 aa8.56□□□□□ -1.04
CLIP1-203ENST00000361654 PRORYQ9H606 182 aa8.56□□□□□ -1.04
CLIP1-203ENST00000361654 DOCK8Q8NF50 2099 aa8.56□□□□□ -1.04
CLIP1-203ENST00000361654 HILS1P60008 231 aa8.56□□□□□ -1.04
CLIP1-203ENST00000361654 COX11Q9Y6N1 276 aa8.56□□□□□ -1.04
CLIP1-203ENST00000361654 IGLC7A0M8Q6 106 aa8.56□□□□□ -1.04
CLIP1-203ENST00000361654 Q0VG73 95 aa8.56□□□□□ -1.04
CLIP1-203ENST00000361654 ZFHX2Q9C0A1 2572 aaPredicted RBP8.56□□□□□ -1.04
CLIP1-203ENST00000361654 ACACBO00763 2458 aa8.56□□□□□ -1.04
CLIP1-203ENST00000361654 IGLV10-54A0A075B6I4 117 aa8.56□□□□□ -1.04
CLIP1-203ENST00000361654 SPRY2O43597 315 aa8.56□□□□□ -1.04
CLIP1-203ENST00000361654 C5orf56Q8N8D9 126 aa8.56□□□□□ -1.04
CLIP1-203ENST00000361654 RNF138Q8WVD3 245 aa8.56□□□□□ -1.04
CLIP1-203ENST00000361654 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.55□□□□□ -1.04
CLIP1-203ENST00000361654 IGKV2-29A2NJV5 120 aaPredicted RBP8.55□□□□□ -1.04
CLIP1-203ENST00000361654 H3BQ85 93 aa8.55□□□□□ -1.04
CLIP1-203ENST00000361654 ZC2HC1AQ96GY0 325 aa8.55□□□□□ -1.04
CLIP1-203ENST00000361654 DNAJC9-AS1A6NH13 148 aa8.55□□□□□ -1.04
CLIP1-203ENST00000361654 DYNAPQ8N1N2 210 aa8.55□□□□□ -1.04
CLIP1-203ENST00000361654 GPHB5Q86YW7 130 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms