RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 FER1L6-AS1Q8NA97 138 aa5.56□□□□□ -1.52
CLCN3-202ENST00000360642 OR10AG1Q8NH19 301 aa5.56□□□□□ -1.52
CLCN3-202ENST00000360642 SLC50A1Q9BRV3 221 aa5.56□□□□□ -1.52
CLCN3-202ENST00000360642 C11orf21Q9P2W6 132 aa5.56□□□□□ -1.52
CLCN3-202ENST00000360642 IGHV3OR16-10A0A075B7F0 116 aa5.55□□□□□ -1.52
CLCN3-202ENST00000360642 TRAV8-2A0A0B4J237 113 aa5.55□□□□□ -1.52
CLCN3-202ENST00000360642 TMEM89A2RUT3 159 aa5.55□□□□□ -1.52
CLCN3-202ENST00000360642 FABP5P3A8MUU1 101 aa5.55□□□□□ -1.52
CLCN3-202ENST00000360642 IGHV4-39P01824 125 aa5.55□□□□□ -1.52
CLCN3-202ENST00000360642 CRIP2P52943 208 aaPredicted RBP5.55□□□□□ -1.52
CLCN3-202ENST00000360642 ERCC8Q13216 396 aa5.55□□□□□ -1.52
CLCN3-202ENST00000360642 PIFOQ8TCI5 191 aa5.55□□□□□ -1.52
CLCN3-202ENST00000360642 EEF1AKMT3Q96AZ1 226 aa5.55□□□□□ -1.52
CLCN3-202ENST00000360642 PRELID3AQ96N28 172 aa5.55□□□□□ -1.52
CLCN3-202ENST00000360642 Q9H8V8 135 aa5.55□□□□□ -1.52
CLCN3-202ENST00000360642 SCRT2Q9NQ03 307 aa5.55□□□□□ -1.52
CLCN3-202ENST00000360642 GOLT1BQ9Y3E0 138 aa5.55□□□□□ -1.52
CLCN3-202ENST00000360642 IGHV3OR16-13A0A075B7E8 117 aa5.55□□□□□ -1.52
CLCN3-202ENST00000360642 IGHV3-74A0A0B4J1X5 117 aa5.55□□□□□ -1.52
CLCN3-202ENST00000360642 GNLYP22749 145 aa5.55□□□□□ -1.52
CLCN3-202ENST00000360642 HINT1P49773 126 aaPredicted RBP5.55□□□□□ -1.52
CLCN3-202ENST00000360642 RNF182Q8N6D2 247 aa5.55□□□□□ -1.52
CLCN3-202ENST00000360642 MS4A6AQ9H2W1 248 aa5.55□□□□□ -1.52
CLCN3-202ENST00000360642 SELENOKQ9Y6D0 94 aa5.55□□□□□ -1.52
CLCN3-202ENST00000360642 TWIST1Q15672 202 aa5.55□□□□□ -1.52
CLCN3-202ENST00000360642 RNF185Q96GF1 192 aa5.55□□□□□ -1.52
CLCN3-202ENST00000360642 IGHV3-66A0A0C4DH42 116 aa5.54□□□□□ -1.52
CLCN3-202ENST00000360642 LINC01546A6NGU7 62 aa5.54□□□□□ -1.52
CLCN3-202ENST00000360642 H0Y8G0 127 aa5.54□□□□□ -1.52
CLCN3-202ENST00000360642 NCR2O95944 276 aa5.54□□□□□ -1.52
CLCN3-202ENST00000360642 LOC389332A0A1B0GUA5 103 aa5.54□□□□□ -1.52
CLCN3-202ENST00000360642 ATP5G2Q06055 141 aa5.54□□□□□ -1.52
CLCN3-202ENST00000360642 Q6ZVH6 145 aa5.54□□□□□ -1.52
CLCN3-202ENST00000360642 IL17RELQ6ZVW7 336 aa5.54□□□□□ -1.52
CLCN3-202ENST00000360642 METTL26Q96S19 204 aa5.54□□□□□ -1.52
CLCN3-202ENST00000360642 AGPAT4-IT1Q9H0P7 198 aa5.54□□□□□ -1.52
CLCN3-202ENST00000360642 MOB4Q9Y3A3 225 aa5.54□□□□□ -1.52
CLCN3-202ENST00000360642 IGHV3-49A0A0A0MS15 119 aa5.53□□□□□ -1.52
CLCN3-202ENST00000360642 TRAV41A0A0B4J266 112 aa5.53□□□□□ -1.52
CLCN3-202ENST00000360642 IGHV1-69DA0A0B4J2H0 117 aa5.53□□□□□ -1.52
CLCN3-202ENST00000360642 IGKV3D-20A0A0C4DH25 116 aa5.53□□□□□ -1.52
CLCN3-202ENST00000360642 HSBP1L1C9JCN9 74 aa5.53□□□□□ -1.52
CLCN3-202ENST00000360642 NPYP01303 97 aa5.53□□□□□ -1.52
CLCN3-202ENST00000360642 IGHV1-69P01742 117 aa5.53□□□□□ -1.52
CLCN3-202ENST00000360642 ORM1P02763 201 aa5.53□□□□□ -1.52
CLCN3-202ENST00000360642 SLC25A34Q6PIV7 304 aa5.53□□□□□ -1.52
CLCN3-202ENST00000360642 TMEM219Q86XT9 240 aa5.53□□□□□ -1.52
CLCN3-202ENST00000360642 ORAOV1Q8WV07 137 aa5.53□□□□□ -1.52
CLCN3-202ENST00000360642 FAM223BA6NKX1 122 aa5.53□□□□□ -1.52
CLCN3-202ENST00000360642 CKS2P33552 79 aa5.53□□□□□ -1.52
CLCN3-202ENST00000360642 C9orf47Q6ZRZ4 202 aa5.53□□□□□ -1.52
CLCN3-202ENST00000360642 FAM223AQ8IWN6 122 aa5.53□□□□□ -1.52
CLCN3-202ENST00000360642 PMCHL2Q9BQD1 86 aa5.53□□□□□ -1.52
CLCN3-202ENST00000360642 HIF1ANQ9NWT6 349 aa5.53□□□□□ -1.52
CLCN3-202ENST00000360642 LINC00527Q9UJ94 153 aa5.53□□□□□ -1.52
CLCN3-202ENST00000360642 SMKR1H3BMG3 65 aa5.53□□□□□ -1.52
CLCN3-202ENST00000360642 BRI3O95415 125 aa5.53□□□□□ -1.52
CLCN3-202ENST00000360642 FXYD7P58549 80 aa5.53□□□□□ -1.52
CLCN3-202ENST00000360642 HIST1H1AQ02539 215 aaPredicted RBP5.53□□□□□ -1.52
CLCN3-202ENST00000360642 TCF21O43680 179 aa5.52□□□□□ -1.53
CLCN3-202ENST00000360642 PPBPP02775 128 aa5.52□□□□□ -1.53
CLCN3-202ENST00000360642 IGF1P05019 195 aa5.52□□□□□ -1.53
CLCN3-202ENST00000360642 TCTAP57738 103 aa5.52□□□□□ -1.53
CLCN3-202ENST00000360642 LGALS9BQ3B8N2 356 aa5.52□□□□□ -1.53
CLCN3-202ENST00000360642 LGALS9CQ6DKI2 356 aa5.52□□□□□ -1.53
CLCN3-202ENST00000360642 PRSS57Q6UWY2 283 aa5.52□□□□□ -1.53
CLCN3-202ENST00000360642 COX11Q9Y6N1 276 aa5.52□□□□□ -1.53
CLCN3-202ENST00000360642 CFAP46Q8IYW2 2715 aa5.52□□□□□ -1.53
CLCN3-202ENST00000360642 IGHV4-61A0A0C4DH41 118 aa5.52□□□□□ -1.53
CLCN3-202ENST00000360642 ZNF207O43670 478 aaKnown RBP5.52□□□□□ -1.53
CLCN3-202ENST00000360642 GAS8-AS1O95177 125 aa5.52□□□□□ -1.53
CLCN3-202ENST00000360642 HBDP02042 147 aa5.52□□□□□ -1.53
CLCN3-202ENST00000360642 COX8AP10176 69 aa5.52□□□□□ -1.53
CLCN3-202ENST00000360642 MPV17L2Q567V2 206 aa5.52□□□□□ -1.53
CLCN3-202ENST00000360642 FLNCQ14315 2725 aa5.52□□□□□ -1.53
CLCN3-202ENST00000360642 ZFYVE26Q68DK2 2539 aa5.52□□□□□ -1.53
CLCN3-202ENST00000360642 ACACBO00763 2458 aa5.52□□□□□ -1.53
CLCN3-202ENST00000360642 IGHV7-4-1A0A0J9YVY3 117 aa5.52□□□□□ -1.53
CLCN3-202ENST00000360642 BRD3OSQ6XYD6 125 aa5.52□□□□□ -1.53
CLCN3-202ENST00000360642 ABCA2Q9BZC7 2435 aa5.51□□□□□ -1.53
CLCN3-202ENST00000360642 BVES-AS1Q5T3Y7 98 aa5.51□□□□□ -1.53
CLCN3-202ENST00000360642 TMEM78Q5T7P6 136 aa5.51□□□□□ -1.53
CLCN3-202ENST00000360642 OR8A1Q8NGG7 326 aa5.51□□□□□ -1.53
CLCN3-202ENST00000360642 C10orf105Q8TEF2 133 aa5.51□□□□□ -1.53
CLCN3-202ENST00000360642 CENPEQ02224 2701 aa5.51□□□□□ -1.53
CLCN3-202ENST00000360642 TRAV40A0A0B4J280 105 aa5.51□□□□□ -1.53
CLCN3-202ENST00000360642 TRGV3P03979 118 aa5.51□□□□□ -1.53
CLCN3-202ENST00000360642 FGF6P10767 208 aa5.51□□□□□ -1.53
CLCN3-202ENST00000360642 GPHB5Q86YW7 130 aa5.51□□□□□ -1.53
CLCN3-202ENST00000360642 PRR26Q8N8Z3 221 aa5.51□□□□□ -1.53
CLCN3-202ENST00000360642 PKD1L2Q7Z442 2459 aa5.51□□□□□ -1.53
CLCN3-202ENST00000360642 POLQO75417 2590 aa5.5□□□□□ -1.53
CLCN3-202ENST00000360642 IGHV4-4A0A075B6R2 117 aa5.5□□□□□ -1.53
CLCN3-202ENST00000360642 NDUFS8O00217 210 aa5.5□□□□□ -1.53
CLCN3-202ENST00000360642 NUDT3O95989 172 aa5.5□□□□□ -1.53
CLCN3-202ENST00000360642 IGHG2P01859 326 aa5.5□□□□□ -1.53
CLCN3-202ENST00000360642 IGHV4-38-2P0DP08 117 aa5.5□□□□□ -1.53
CLCN3-202ENST00000360642 UNQ9165/PRO28630Q6UXU0 137 aa5.5□□□□□ -1.53
CLCN3-202ENST00000360642 C2orf91Q6ZV80 131 aa5.5□□□□□ -1.53
CLCN3-202ENST00000360642 ZNF738Q8NE65 137 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms