RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 C7orf71A4D174 169 aa10.24□□□□□ -0.77
PDLIM5-203ENST00000359265 SPINK4O60575 86 aa10.24□□□□□ -0.77
PDLIM5-203ENST00000359265 CDKN1BP46527 198 aa10.24□□□□□ -0.77
PDLIM5-203ENST00000359265 FOXA3P55318 350 aaPredicted RBP10.24□□□□□ -0.77
PDLIM5-203ENST00000359265 RAB5BP61020 215 aa10.24□□□□□ -0.77
PDLIM5-203ENST00000359265 BEAN1Q3B7T3 259 aa10.24□□□□□ -0.77
PDLIM5-203ENST00000359265 MRPL54Q6P161 138 aaKnown RBP10.24□□□□□ -0.77
PDLIM5-203ENST00000359265 RASL11AQ6T310 242 aa10.24□□□□□ -0.77
PDLIM5-203ENST00000359265 AMTNQ6UX39 209 aa10.24□□□□□ -0.77
PDLIM5-203ENST00000359265 PGLYRP4Q96LB8 373 aa10.24□□□□□ -0.77
PDLIM5-203ENST00000359265 CLUHP3Q96NS8 147 aa10.24□□□□□ -0.77
PDLIM5-203ENST00000359265 IGKV3D-20A0A0C4DH25 116 aa10.23□□□□□ -0.77
PDLIM5-203ENST00000359265 ZNF124Q15973 351 aa10.23□□□□□ -0.77
PDLIM5-203ENST00000359265 SPINK13Q1W4C9 94 aa10.23□□□□□ -0.77
PDLIM5-203ENST00000359265 WDR73Q6P4I2 378 aa10.23□□□□□ -0.77
PDLIM5-203ENST00000359265 STHQ8IWL8 128 aa10.23□□□□□ -0.77
PDLIM5-203ENST00000359265 NAGKQ9UJ70 344 aa10.23□□□□□ -0.77
PDLIM5-203ENST00000359265 M0R2Z0 102 aa10.22□□□□□ -0.77
PDLIM5-203ENST00000359265 MT-ND6P03923 174 aa10.22□□□□□ -0.77
PDLIM5-203ENST00000359265 CTRLP40313 264 aa10.22□□□□□ -0.77
PDLIM5-203ENST00000359265 KIR3DS1Q14943 382 aa10.22□□□□□ -0.77
PDLIM5-203ENST00000359265 GFI1BQ5VTD9 330 aa10.22□□□□□ -0.77
PDLIM5-203ENST00000359265 FER1L6-AS1Q8NA97 138 aa10.22□□□□□ -0.77
PDLIM5-203ENST00000359265 C11orf21Q9P2W6 132 aa10.22□□□□□ -0.77
PDLIM5-203ENST00000359265 TRAV12-3A0A0B4J271 114 aa10.21□□□□□ -0.77
PDLIM5-203ENST00000359265 A0A1B0GUT8 65 aa10.21□□□□□ -0.77
PDLIM5-203ENST00000359265 SNURFLB1AK76 121 aa10.21□□□□□ -0.77
PDLIM5-203ENST00000359265 AMBPP02760 352 aa10.21□□□□□ -0.77
PDLIM5-203ENST00000359265 TRGC2P03986 189 aa10.21□□□□□ -0.77
PDLIM5-203ENST00000359265 S100A8P05109 93 aa10.21□□□□□ -0.77
PDLIM5-203ENST00000359265 CD7P09564 240 aa10.21□□□□□ -0.77
PDLIM5-203ENST00000359265 IGLC6P0CF74 106 aa10.21□□□□□ -0.77
PDLIM5-203ENST00000359265 HBBP68871 147 aa10.21□□□□□ -0.77
PDLIM5-203ENST00000359265 RIGQ13278 110 aa10.21□□□□□ -0.77
PDLIM5-203ENST00000359265 TPPP3Q9BW30 176 aa10.21□□□□□ -0.77
PDLIM5-203ENST00000359265 TRAPPC1Q9Y5R8 145 aa10.21□□□□□ -0.77
PDLIM5-203ENST00000359265 TRAV12-2A0A075B6T6 113 aa10.2□□□□□ -0.78
PDLIM5-203ENST00000359265 A0A1B0GW15 77 aa10.2□□□□□ -0.78
PDLIM5-203ENST00000359265 A0A1B0GXF2 115 aa10.2□□□□□ -0.78
PDLIM5-203ENST00000359265 GRIFINA4D1Z8 144 aa10.2□□□□□ -0.78
PDLIM5-203ENST00000359265 RBMY1BA6NDE4 496 aaKnown RBP10.2□□□□□ -0.78
PDLIM5-203ENST00000359265 RBMY1EA6NEQ0 496 aaKnown RBP10.2□□□□□ -0.78
PDLIM5-203ENST00000359265 HLA-DQA1P01909 254 aa10.2□□□□□ -0.78
PDLIM5-203ENST00000359265 RBMY1DP0C7P1 496 aaKnown RBP10.2□□□□□ -0.78
PDLIM5-203ENST00000359265 IGLL1P15814 213 aa10.2□□□□□ -0.78
PDLIM5-203ENST00000359265 RAB4BP61018 213 aa10.2□□□□□ -0.78
PDLIM5-203ENST00000359265 ANXA2RQ3ZCQ2 193 aa10.2□□□□□ -0.78
PDLIM5-203ENST00000359265 FAM159AQ6UWV7 190 aa10.2□□□□□ -0.78
PDLIM5-203ENST00000359265 TRPT1Q86TN4 253 aaKnown RBP10.2□□□□□ -0.78
PDLIM5-203ENST00000359265 GTSCR1Q86UQ5 136 aa10.2□□□□□ -0.78
PDLIM5-203ENST00000359265 FRZBQ92765 325 aa10.2□□□□□ -0.78
PDLIM5-203ENST00000359265 KCNS1Q96KK3 526 aa10.2□□□□□ -0.78
PDLIM5-203ENST00000359265 GNB1LQ9BYB4 327 aa10.2□□□□□ -0.78
PDLIM5-203ENST00000359265 ZMAT5Q9UDW3 170 aaKnown RBP10.2□□□□□ -0.78
PDLIM5-203ENST00000359265 F2Z2F3 143 aa10.19□□□□□ -0.78
PDLIM5-203ENST00000359265 ARMS2P0C7Q2 107 aa10.19□□□□□ -0.78
PDLIM5-203ENST00000359265 ASIPP42127 132 aa10.19□□□□□ -0.78
PDLIM5-203ENST00000359265 FXYD7P58549 80 aa10.19□□□□□ -0.78
PDLIM5-203ENST00000359265 MUC21Q5SSG8 566 aa10.19□□□□□ -0.78
PDLIM5-203ENST00000359265 LYZL1Q6UWQ5 148 aa10.19□□□□□ -0.78
PDLIM5-203ENST00000359265 Q6ZQT7 251 aa10.19□□□□□ -0.78
PDLIM5-203ENST00000359265 TMEM136Q6ZRR5 245 aa10.19□□□□□ -0.78
PDLIM5-203ENST00000359265 ZFP82Q8N141 532 aa10.19□□□□□ -0.78
PDLIM5-203ENST00000359265 C19orf73Q9NVV2 129 aa10.19□□□□□ -0.78
PDLIM5-203ENST00000359265 ZNF324O75467 553 aaPredicted RBP10.18□□□□□ -0.78
PDLIM5-203ENST00000359265 MED14OSP0DP75 135 aa10.18□□□□□ -0.78
PDLIM5-203ENST00000359265 CAMPP49913 170 aa10.18□□□□□ -0.78
PDLIM5-203ENST00000359265 NUTF2P61970 127 aaKnown RBP10.18□□□□□ -0.78
PDLIM5-203ENST00000359265 FABP9Q0Z7S8 132 aa10.18□□□□□ -0.78
PDLIM5-203ENST00000359265 C20orf144Q9BQM9 153 aa10.18□□□□□ -0.78
PDLIM5-203ENST00000359265 MRPL18Q9H0U6 180 aaKnown RBP10.18□□□□□ -0.78
PDLIM5-203ENST00000359265 H3BVH4 76 aa10.17□□□□□ -0.78
PDLIM5-203ENST00000359265 CRXO43186 299 aaPredicted RBP10.17□□□□□ -0.78
PDLIM5-203ENST00000359265 INSP01308 110 aa10.17□□□□□ -0.78
PDLIM5-203ENST00000359265 OR5AL1P0C617 328 aa10.17□□□□□ -0.78
PDLIM5-203ENST00000359265 FRMD6-AS1P0C7T7 363 aa10.17□□□□□ -0.78
PDLIM5-203ENST00000359265 S100A4P26447 101 aaKnown RBP10.17□□□□□ -0.78
PDLIM5-203ENST00000359265 CACNG7P62955 275 aa10.17□□□□□ -0.78
PDLIM5-203ENST00000359265 DNLZQ5SXM8 178 aa10.17□□□□□ -0.78
PDLIM5-203ENST00000359265 IGHV1OR15-1A0A075B7D0 117 aa10.16□□□□□ -0.78
PDLIM5-203ENST00000359265 SNAI2O43623 268 aa10.16□□□□□ -0.78
PDLIM5-203ENST00000359265 TDRG1Q3Y452 100 aa10.16□□□□□ -0.78
PDLIM5-203ENST00000359265 ZNF575Q86XF7 245 aa10.16□□□□□ -0.78
PDLIM5-203ENST00000359265 GATD1Q8NB37 220 aa10.16□□□□□ -0.78
PDLIM5-203ENST00000359265 CNFNQ9BYD5 112 aa10.16□□□□□ -0.78
PDLIM5-203ENST00000359265 WFDC10AQ9H1F0 79 aa10.16□□□□□ -0.78
PDLIM5-203ENST00000359265 TRGV11A0A075B6L2 103 aa10.15□□□□□ -0.78
PDLIM5-203ENST00000359265 PHOX2AO14813 284 aa10.15□□□□□ -0.78
PDLIM5-203ENST00000359265 APCSP02743 223 aa10.15□□□□□ -0.78
PDLIM5-203ENST00000359265 TRGC1P0CF51 173 aa10.15□□□□□ -0.78
PDLIM5-203ENST00000359265 MORN3Q6PF18 240 aaPredicted RBP10.15□□□□□ -0.78
PDLIM5-203ENST00000359265 SSBP4Q9BWG4 385 aaPredicted RBP10.15□□□□□ -0.78
PDLIM5-203ENST00000359265 HIST1H2BKO60814 126 aa10.14□□□□□ -0.79
PDLIM5-203ENST00000359265 S100A6P06703 90 aa10.14□□□□□ -0.79
PDLIM5-203ENST00000359265 HIST1H2BJP06899 126 aa10.14□□□□□ -0.79
PDLIM5-203ENST00000359265 HIST1H2BOP23527 126 aa10.14□□□□□ -0.79
PDLIM5-203ENST00000359265 HIST1H2BBP33778 126 aa10.14□□□□□ -0.79
PDLIM5-203ENST00000359265 HIST1H2BDP58876 126 aa10.14□□□□□ -0.79
PDLIM5-203ENST00000359265 HIST1H2BCP62807 126 aa10.14□□□□□ -0.79
PDLIM5-203ENST00000359265 HIST2H2BEQ16778 126 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms