RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 ADAMTSL5Q6ZMM2 481 aa10.16□□□□□ -0.78
NLRC3-202ENST00000359128 ZNF318Q5VUA4 2279 aa10.16□□□□□ -0.78
NLRC3-202ENST00000359128 IGHG4P01861 327 aa10.15□□□□□ -0.78
NLRC3-202ENST00000359128 ZNF493Q6ZR52 646 aa10.15□□□□□ -0.78
NLRC3-202ENST00000359128 GVINP1Q7Z2Y8 2422 aa10.15□□□□□ -0.78
NLRC3-202ENST00000359128 IGLV10-54A0A075B6I4 117 aa10.15□□□□□ -0.78
NLRC3-202ENST00000359128 IGHV4-4A0A075B6R2 117 aa10.15□□□□□ -0.78
NLRC3-202ENST00000359128 DEFB135Q30KP9 77 aa10.15□□□□□ -0.78
NLRC3-202ENST00000359128 IGLC7A0M8Q6 106 aa10.15□□□□□ -0.78
NLRC3-202ENST00000359128 DAZ2Q13117 558 aaKnown RBP10.15□□□□□ -0.78
NLRC3-202ENST00000359128 DAZ4Q86SG3 579 aaKnown RBP10.15□□□□□ -0.78
NLRC3-202ENST00000359128 FANCD2OSQ96PS1 177 aa10.15□□□□□ -0.78
NLRC3-202ENST00000359128 TIMM17AQ99595 171 aa10.15□□□□□ -0.78
NLRC3-202ENST00000359128 CITED2Q99967 270 aaPredicted RBP10.15□□□□□ -0.78
NLRC3-202ENST00000359128 DAZ3Q9NR90 486 aaKnown RBP10.15□□□□□ -0.78
NLRC3-202ENST00000359128 COX7A2LO14548 114 aa10.15□□□□□ -0.79
NLRC3-202ENST00000359128 MPV17L2Q567V2 206 aa10.15□□□□□ -0.79
NLRC3-202ENST00000359128 DNAJC9-AS1A6NH13 148 aa10.14□□□□□ -0.79
NLRC3-202ENST00000359128 PI4KAP42356 2102 aa10.14□□□□□ -0.79
NLRC3-202ENST00000359128 MORN5Q5VZ52 161 aa10.14□□□□□ -0.79
NLRC3-202ENST00000359128 KMT2EQ8IZD2 1858 aa10.14□□□□□ -0.79
NLRC3-202ENST00000359128 HHLA3Q9XRX5 114 aa10.14□□□□□ -0.79
NLRC3-202ENST00000359128 PHF3Q92576 2039 aaKnown RBP10.14□□□□□ -0.79
NLRC3-202ENST00000359128 C5orf38Q86SI9 138 aa10.14□□□□□ -0.79
NLRC3-202ENST00000359128 RTTNQ86VV8 2226 aa10.14□□□□□ -0.79
NLRC3-202ENST00000359128 C2orf70A6NJV1 201 aa10.13□□□□□ -0.79
NLRC3-202ENST00000359128 NPYP01303 97 aa10.13□□□□□ -0.79
NLRC3-202ENST00000359128 Q0VG73 95 aa10.13□□□□□ -0.79
NLRC3-202ENST00000359128 FAM231DQ6ZW35 169 aa10.13□□□□□ -0.79
NLRC3-202ENST00000359128 C11orf53Q8IXP5 236 aa10.13□□□□□ -0.79
NLRC3-202ENST00000359128 C18orf32Q8TCD1 76 aa10.13□□□□□ -0.79
NLRC3-202ENST00000359128 INTS1Q8N201 2190 aaKnown RBP10.13□□□□□ -0.79
NLRC3-202ENST00000359128 AMTNQ6UX39 209 aa10.13□□□□□ -0.79
NLRC3-202ENST00000359128 BOD1L2Q8IYS8 172 aa10.13□□□□□ -0.79
NLRC3-202ENST00000359128 ZNF524Q96C55 264 aa10.13□□□□□ -0.79
NLRC3-202ENST00000359128 RSPO3Q9BXY4 272 aaPredicted RBP10.13□□□□□ -0.79
NLRC3-202ENST00000359128 LTAP01374 205 aa10.13□□□□□ -0.79
NLRC3-202ENST00000359128 INSL3P51460 131 aa10.13□□□□□ -0.79
NLRC3-202ENST00000359128 DEFB4AO15263 64 aa10.13□□□□□ -0.79
NLRC3-202ENST00000359128 POU2AF1Q16633 256 aa10.12□□□□□ -0.79
NLRC3-202ENST00000359128 LENEPQ9Y5L5 61 aa10.12□□□□□ -0.79
NLRC3-202ENST00000359128 RSPO1Q2MKA7 263 aaPredicted RBP10.12□□□□□ -0.79
NLRC3-202ENST00000359128 LRRC75A-AS1Q8N1F1 130 aa10.12□□□□□ -0.79
NLRC3-202ENST00000359128 AGPAT4-IT1Q9H0P7 198 aa10.12□□□□□ -0.79
NLRC3-202ENST00000359128 FGF6P10767 208 aa10.12□□□□□ -0.79
NLRC3-202ENST00000359128 NDUFA11Q86Y39 141 aa10.12□□□□□ -0.79
NLRC3-202ENST00000359128 HERV-K104P63124 156 aa10.12□□□□□ -0.79
NLRC3-202ENST00000359128 C16orf54Q6UWD8 224 aa10.12□□□□□ -0.79
NLRC3-202ENST00000359128 SPRY2O43597 315 aa10.12□□□□□ -0.79
NLRC3-202ENST00000359128 UTF1Q5T230 341 aa10.12□□□□□ -0.79
NLRC3-202ENST00000359128 ARTNQ5T4W7 220 aa10.12□□□□□ -0.79
NLRC3-202ENST00000359128 RNF138Q8WVD3 245 aa10.11□□□□□ -0.79
NLRC3-202ENST00000359128 RNF183Q96D59 192 aa10.11□□□□□ -0.79
NLRC3-202ENST00000359128 V9GYV3 84 aa10.11□□□□□ -0.79
NLRC3-202ENST00000359128 TRAV12-1A0A0B4J245 112 aa10.11□□□□□ -0.79
NLRC3-202ENST00000359128 J3QQQ9 107 aa10.11□□□□□ -0.79
NLRC3-202ENST00000359128 RITA1Q96K30 269 aa10.11□□□□□ -0.79
NLRC3-202ENST00000359128 SPANXA1Q9NS26 97 aa10.11□□□□□ -0.79
NLRC3-202ENST00000359128 A8MWP6 167 aa10.11□□□□□ -0.79
NLRC3-202ENST00000359128 TRAV4A0A0B4J268 109 aa10.11□□□□□ -0.79
NLRC3-202ENST00000359128 Q8N9W7 124 aa10.11□□□□□ -0.79
NLRC3-202ENST00000359128 NCKAP5O14513 1909 aa10.1□□□□□ -0.79
NLRC3-202ENST00000359128 TRBV20-1A0A075B6N2 111 aa10.1□□□□□ -0.79
NLRC3-202ENST00000359128 ZNF726P1Q15940 193 aa10.1□□□□□ -0.79
NLRC3-202ENST00000359128 Q9H8V8 135 aa10.1□□□□□ -0.79
NLRC3-202ENST00000359128 TMEM89A2RUT3 159 aa10.1□□□□□ -0.79
NLRC3-202ENST00000359128 ASPHD1Q5U4P2 390 aa10.1□□□□□ -0.79
NLRC3-202ENST00000359128 MRPL35Q9NZE8 188 aaKnown RBP10.1□□□□□ -0.79
NLRC3-202ENST00000359128 ANAPC1Q9H1A4 1944 aa10.1□□□□□ -0.79
NLRC3-202ENST00000359128 LOC105371267A0A1B0GV96 52 aa10.1□□□□□ -0.79
NLRC3-202ENST00000359128 F8VRH5 84 aa10.1□□□□□ -0.79
NLRC3-202ENST00000359128 EGR2P11161 476 aaPredicted RBP10.1□□□□□ -0.79
NLRC3-202ENST00000359128 C1orf147Q96MC9 270 aaPredicted RBP10.09□□□□□ -0.79
NLRC3-202ENST00000359128 KIF26AQ9ULI4 1882 aaPredicted RBP10.09□□□□□ -0.79
NLRC3-202ENST00000359128 TINCRA0A1B0GVN0 87 aa10.09□□□□□ -0.79
NLRC3-202ENST00000359128 IGLV3-1P01715 115 aa10.09□□□□□ -0.79
NLRC3-202ENST00000359128 LGALS9BQ3B8N2 356 aa10.09□□□□□ -0.79
NLRC3-202ENST00000359128 LGALS9CQ6DKI2 356 aa10.09□□□□□ -0.79
NLRC3-202ENST00000359128 IGLV11-55A0A075B6I3 123 aa10.09□□□□□ -0.79
NLRC3-202ENST00000359128 LOXL1Q08397 574 aaPredicted RBP10.09□□□□□ -0.79
NLRC3-202ENST00000359128 BVES-AS1Q5T3Y7 98 aa10.09□□□□□ -0.79
NLRC3-202ENST00000359128 C9orf47Q6ZRZ4 202 aa10.09□□□□□ -0.79
NLRC3-202ENST00000359128 C11orf45Q8TAV5 145 aa10.09□□□□□ -0.79
NLRC3-202ENST00000359128 I3L2K1 104 aa10.08□□□□□ -0.8
NLRC3-202ENST00000359128 CACNA1BQ00975 2339 aa10.08□□□□□ -0.8
NLRC3-202ENST00000359128 NDUFA1O15239 70 aa10.08□□□□□ -0.8
NLRC3-202ENST00000359128 ORMDL1Q9P0S3 153 aa10.08□□□□□ -0.8
NLRC3-202ENST00000359128 EP300Q09472 2414 aaPredicted RBP10.08□□□□□ -0.8
NLRC3-202ENST00000359128 INAFM1C9JVW0 142 aa10.08□□□□□ -0.8
NLRC3-202ENST00000359128 CEND1Q8N111 149 aa10.08□□□□□ -0.8
NLRC3-202ENST00000359128 CACNA1EQ15878 2313 aa10.07□□□□□ -0.8
NLRC3-202ENST00000359128 SPTBN2O15020 2390 aa10.07□□□□□ -0.8
NLRC3-202ENST00000359128 K7EMI3 77 aa10.07□□□□□ -0.8
NLRC3-202ENST00000359128 PRO1854Q9UHT4 67 aa10.07□□□□□ -0.8
NLRC3-202ENST00000359128 CNOT1A5YKK6 2376 aaKnown RBP10.07□□□□□ -0.8
NLRC3-202ENST00000359128 FUSP35637 526 aaKnown RBP eCLIP10.07□□□□□ -0.8
NLRC3-202ENST00000359128 C9orf153Q5TBE3 101 aa10.07□□□□□ -0.8
NLRC3-202ENST00000359128 CARD19Q96LW7 228 aa10.07□□□□□ -0.8
NLRC3-202ENST00000359128 K7EMT4 169 aa10.07□□□□□ -0.8
NLRC3-202ENST00000359128 C14orf177Q52M58 125 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms