RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 PHOX2AO14813 284 aa8.06□□□□□ -1.12
TRAPPC4-201ENST00000359005 PF4P02776 101 aa8.06□□□□□ -1.12
TRAPPC4-201ENST00000359005 ZNF688P0C7X2 276 aa8.06□□□□□ -1.12
TRAPPC4-201ENST00000359005 MED14OSP0DP75 135 aa8.06□□□□□ -1.12
TRAPPC4-201ENST00000359005 S100A4P26447 101 aaKnown RBP8.06□□□□□ -1.12
TRAPPC4-201ENST00000359005 CTRLP40313 264 aa8.06□□□□□ -1.12
TRAPPC4-201ENST00000359005 Q0VG73 95 aa8.06□□□□□ -1.12
TRAPPC4-201ENST00000359005 DEFB114Q30KQ6 69 aa8.06□□□□□ -1.12
TRAPPC4-201ENST00000359005 FAM159AQ6UWV7 190 aa8.06□□□□□ -1.12
TRAPPC4-201ENST00000359005 APRG1Q8IVJ8 170 aa8.06□□□□□ -1.12
TRAPPC4-201ENST00000359005 DNAH9Q9NYC9 4486 aa8.05□□□□□ -1.12
TRAPPC4-201ENST00000359005 TMSB15BA0A087X1C1 80 aa8.05□□□□□ -1.12
TRAPPC4-201ENST00000359005 AMBPP02760 352 aa8.05□□□□□ -1.12
TRAPPC4-201ENST00000359005 ASIPP42127 132 aa8.05□□□□□ -1.12
TRAPPC4-201ENST00000359005 CDKN1BP46527 198 aa8.05□□□□□ -1.12
TRAPPC4-201ENST00000359005 LYZL1Q6UWQ5 148 aa8.05□□□□□ -1.12
TRAPPC4-201ENST00000359005 C18orf65Q6ZTR6 163 aa8.05□□□□□ -1.12
TRAPPC4-201ENST00000359005 GATD1Q8NB37 220 aa8.05□□□□□ -1.12
TRAPPC4-201ENST00000359005 FAM19A4Q96LR4 140 aa8.05□□□□□ -1.12
TRAPPC4-201ENST00000359005 OR5AL1P0C617 328 aa8.04□□□□□ -1.12
TRAPPC4-201ENST00000359005 IGLC6P0CF74 106 aa8.04□□□□□ -1.12
TRAPPC4-201ENST00000359005 RNASE4P34096 147 aaKnown RBP8.04□□□□□ -1.12
TRAPPC4-201ENST00000359005 INSL3P51460 131 aa8.04□□□□□ -1.12
TRAPPC4-201ENST00000359005 ZNF80P51504 273 aaPredicted RBP8.04□□□□□ -1.12
TRAPPC4-201ENST00000359005 NUTF2P61970 127 aaKnown RBP8.04□□□□□ -1.12
TRAPPC4-201ENST00000359005 TWIST1Q15672 202 aa8.04□□□□□ -1.12
TRAPPC4-201ENST00000359005 ZNF493Q6ZR52 646 aa8.04□□□□□ -1.12
TRAPPC4-201ENST00000359005 CLUHP3Q96NS8 147 aa8.04□□□□□ -1.12
TRAPPC4-201ENST00000359005 C7orf71A4D174 169 aa8.03□□□□□ -1.12
TRAPPC4-201ENST00000359005 ADARB2-AS1A8MUL3 147 aa8.03□□□□□ -1.12
TRAPPC4-201ENST00000359005 KLLNB2CW77 178 aa8.03□□□□□ -1.12
TRAPPC4-201ENST00000359005 SAP30O75446 220 aa8.03□□□□□ -1.12
TRAPPC4-201ENST00000359005 PPBPP02775 128 aa8.03□□□□□ -1.12
TRAPPC4-201ENST00000359005 ARMS2P0C7Q2 107 aa8.03□□□□□ -1.12
TRAPPC4-201ENST00000359005 GZMBP10144 247 aa8.03□□□□□ -1.12
TRAPPC4-201ENST00000359005 NSUN5P1Q3KNT7 163 aa8.03□□□□□ -1.12
TRAPPC4-201ENST00000359005 DNLZQ5SXM8 178 aa8.03□□□□□ -1.12
TRAPPC4-201ENST00000359005 TMEM61Q8N0U2 210 aa8.03□□□□□ -1.12
TRAPPC4-201ENST00000359005 ZFAND2AQ8N6M9 145 aa8.03□□□□□ -1.12
TRAPPC4-201ENST00000359005 FAM110AQ9BQ89 295 aa8.03□□□□□ -1.12
TRAPPC4-201ENST00000359005 C20orf144Q9BQM9 153 aa8.03□□□□□ -1.12
TRAPPC4-201ENST00000359005 CNFNQ9BYD5 112 aa8.03□□□□□ -1.12
TRAPPC4-201ENST00000359005 LOC102724200A0A096LPH7 203 aaPredicted RBP8.02□□□□□ -1.13
TRAPPC4-201ENST00000359005 OR11H12B2RN74 326 aa8.02□□□□□ -1.13
TRAPPC4-201ENST00000359005 ZNF705DP0CH99 300 aaPredicted RBP8.02□□□□□ -1.13
TRAPPC4-201ENST00000359005 ZNF705BP0CI00 300 aaPredicted RBP8.02□□□□□ -1.13
TRAPPC4-201ENST00000359005 SMIM6P0DI80 62 aa8.02□□□□□ -1.13
TRAPPC4-201ENST00000359005 HLA-DRB4P13762 266 aa8.02□□□□□ -1.13
TRAPPC4-201ENST00000359005 RAB4AP20338 218 aa8.02□□□□□ -1.13
TRAPPC4-201ENST00000359005 SRIP30626 198 aa8.02□□□□□ -1.13
TRAPPC4-201ENST00000359005 DEFB131AP59861 70 aa8.02□□□□□ -1.13
TRAPPC4-201ENST00000359005 CD300EQ496F6 205 aaPredicted RBP8.02□□□□□ -1.13
TRAPPC4-201ENST00000359005 SPANXN1Q5VSR9 72 aa8.02□□□□□ -1.13
TRAPPC4-201ENST00000359005 HIST3H2BBQ8N257 126 aa8.02□□□□□ -1.13
TRAPPC4-201ENST00000359005 PACRGQ96M98 296 aaPredicted RBP8.02□□□□□ -1.13
TRAPPC4-201ENST00000359005 DUX3Q96PT4 197 aa8.02□□□□□ -1.13
TRAPPC4-201ENST00000359005 MCRIP2Q9BUT9 160 aaKnown RBP8.02□□□□□ -1.13
TRAPPC4-201ENST00000359005 TMEM191AQ9H0A3 160 aa8.02□□□□□ -1.13
TRAPPC4-201ENST00000359005 NAGKQ9UJ70 344 aa8.02□□□□□ -1.13
TRAPPC4-201ENST00000359005 LAMTOR2Q9Y2Q5 125 aa8.02□□□□□ -1.13
TRAPPC4-201ENST00000359005 PHLDA3Q9Y5J5 127 aa8.02□□□□□ -1.13
TRAPPC4-201ENST00000359005 HLA-DRB4X5D2U9 266 aa8.02□□□□□ -1.13
TRAPPC4-201ENST00000359005 TRGV11A0A075B6L2 103 aa8.01□□□□□ -1.13
TRAPPC4-201ENST00000359005 IGHV4-4A0A075B6R2 117 aa8.01□□□□□ -1.13
TRAPPC4-201ENST00000359005 F6UB75 175 aa8.01□□□□□ -1.13
TRAPPC4-201ENST00000359005 SNAI2O43623 268 aa8.01□□□□□ -1.13
TRAPPC4-201ENST00000359005 ESDP10768 282 aa8.01□□□□□ -1.13
TRAPPC4-201ENST00000359005 PMCHP20382 165 aa8.01□□□□□ -1.13
TRAPPC4-201ENST00000359005 NTF3P20783 257 aa8.01□□□□□ -1.13
TRAPPC4-201ENST00000359005 EDN2P20800 178 aa8.01□□□□□ -1.13
TRAPPC4-201ENST00000359005 SLAQ13239 276 aa8.01□□□□□ -1.13
TRAPPC4-201ENST00000359005 ADAMTSL5Q6ZMM2 481 aa8.01□□□□□ -1.13
TRAPPC4-201ENST00000359005 SYT8Q8NBV8 401 aa8.01□□□□□ -1.13
TRAPPC4-201ENST00000359005 SSBP4Q9BWG4 385 aaPredicted RBP8.01□□□□□ -1.13
TRAPPC4-201ENST00000359005 SAMD10Q9BYL1 202 aa8.01□□□□□ -1.13
TRAPPC4-201ENST00000359005 IGKV3D-20A0A0C4DH25 116 aa8□□□□□ -1.13
TRAPPC4-201ENST00000359005 GRIFINA4D1Z8 144 aa8□□□□□ -1.13
TRAPPC4-201ENST00000359005 G3V4G9 280 aa8□□□□□ -1.13
TRAPPC4-201ENST00000359005 J3KRW8 73 aa8□□□□□ -1.13
TRAPPC4-201ENST00000359005 PPP1R17O96001 155 aa8□□□□□ -1.13
TRAPPC4-201ENST00000359005 PRB2P02812 416 aaPredicted RBP8□□□□□ -1.13
TRAPPC4-201ENST00000359005 TDRG1Q3Y452 100 aa8□□□□□ -1.13
TRAPPC4-201ENST00000359005 FAM104BQ5XKR9 115 aa8□□□□□ -1.13
TRAPPC4-201ENST00000359005 STHQ8IWL8 128 aa8□□□□□ -1.13
TRAPPC4-201ENST00000359005 ORMDL3Q8N138 153 aa8□□□□□ -1.13
TRAPPC4-201ENST00000359005 ALKBH7Q9BT30 221 aaPredicted RBP8□□□□□ -1.13
TRAPPC4-201ENST00000359005 MAP6D1Q9H9H5 199 aa8□□□□□ -1.13
TRAPPC4-201ENST00000359005 A8MTW9 85 aa7.99□□□□□ -1.13
TRAPPC4-201ENST00000359005 H3BMM0 161 aa7.99□□□□□ -1.13
TRAPPC4-201ENST00000359005 IGLV1-51P01701 117 aa7.99□□□□□ -1.13
TRAPPC4-201ENST00000359005 SMIM17P0DL12 118 aa7.99□□□□□ -1.13
TRAPPC4-201ENST00000359005 FABP4P15090 132 aa7.99□□□□□ -1.13
TRAPPC4-201ENST00000359005 CD33P20138 364 aa7.99□□□□□ -1.13
TRAPPC4-201ENST00000359005 C9orf66Q5T8R8 295 aa7.99□□□□□ -1.13
TRAPPC4-201ENST00000359005 CHCHD1Q96BP2 118 aaKnown RBP7.99□□□□□ -1.13
TRAPPC4-201ENST00000359005 IGHV1OR15-1A0A075B7D0 117 aa7.98□□□□□ -1.13
TRAPPC4-201ENST00000359005 TRAV12-3A0A0B4J271 114 aa7.98□□□□□ -1.13
TRAPPC4-201ENST00000359005 HSBP1O75506 76 aa7.98□□□□□ -1.13
TRAPPC4-201ENST00000359005 PRB4P10163 310 aaPredicted RBP7.98□□□□□ -1.13
TRAPPC4-201ENST00000359005 CKS2P33552 79 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms