RNA–Protein interactions for RNA: ENST00000358438.6

POLR2J2-202, Transcript of RNA polymerase II subunit J2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J2, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2-202ENST00000358438 HIGD1AQ9Y241 93 aa17.24■□□□□ 0.35
POLR2J2-202ENST00000358438 TRAV41A0A0B4J266 112 aa17.23■□□□□ 0.35
POLR2J2-202ENST00000358438 ZNF785A8K8V0 405 aa17.23■□□□□ 0.35
POLR2J2-202ENST00000358438 D6R8Y8 96 aa17.23■□□□□ 0.35
POLR2J2-202ENST00000358438 IGHV3-23P01764 117 aa17.23■□□□□ 0.35
POLR2J2-202ENST00000358438 GCSHP23434 173 aa17.23■□□□□ 0.35
POLR2J2-202ENST00000358438 C15orf32Q32M92 178 aa17.23■□□□□ 0.35
POLR2J2-202ENST00000358438 C19orf54Q5BKX5 351 aa17.23■□□□□ 0.35
POLR2J2-202ENST00000358438 GOLT1AQ6ZVE7 132 aa17.23■□□□□ 0.35
POLR2J2-202ENST00000358438 ZMAT4Q9H898 229 aa17.23■□□□□ 0.35
POLR2J2-202ENST00000358438 CLUHP3Q96NS8 147 aa17.22■□□□□ 0.35
POLR2J2-202ENST00000358438 SELENOKQ9Y6D0 94 aa17.22■□□□□ 0.35
POLR2J2-202ENST00000358438 IGHG2P01859 326 aa17.22■□□□□ 0.35
POLR2J2-202ENST00000358438 IGF1P05019 195 aa17.22■□□□□ 0.35
POLR2J2-202ENST00000358438 FXYD2P54710 66 aa17.22■□□□□ 0.35
POLR2J2-202ENST00000358438 TAL2Q16559 108 aa17.22■□□□□ 0.35
POLR2J2-202ENST00000358438 LYPD1Q8N2G4 141 aa17.22■□□□□ 0.35
POLR2J2-202ENST00000358438 TRAV8-1A0A0A6YYK1 113 aa17.21■□□□□ 0.35
POLR2J2-202ENST00000358438 IGHV4-59P01825 116 aa17.21■□□□□ 0.35
POLR2J2-202ENST00000358438 C9orf139Q6ZV77 190 aa17.21■□□□□ 0.35
POLR2J2-202ENST00000358438 ZNF491Q8N8L2 437 aa17.21■□□□□ 0.35
POLR2J2-202ENST00000358438 ZNF502Q8TBZ5 544 aa17.21■□□□□ 0.35
POLR2J2-202ENST00000358438 CHAC1Q9BUX1 264 aa17.21■□□□□ 0.35
POLR2J2-202ENST00000358438 LINC00527Q9UJ94 153 aa17.21■□□□□ 0.35
POLR2J2-202ENST00000358438 LINC01546A6NGU7 62 aa17.2■□□□□ 0.34
POLR2J2-202ENST00000358438 BLCAPP62952 87 aa17.2■□□□□ 0.34
POLR2J2-202ENST00000358438 RNF125Q96EQ8 232 aa17.2■□□□□ 0.34
POLR2J2-202ENST00000358438 CCDC168Q8NDH2 2452 aa17.2■□□□□ 0.34
POLR2J2-202ENST00000358438 IL4P05112 153 aa17.2■□□□□ 0.34
POLR2J2-202ENST00000358438 SLC25A39Q9BZJ4 359 aaPredicted RBP17.2■□□□□ 0.34
POLR2J2-202ENST00000358438 WI2-2373I1.2A0A1W2PRP0 233 aa17.19■□□□□ 0.34
POLR2J2-202ENST00000358438 SCGB2A1O75556 95 aa17.19■□□□□ 0.34
POLR2J2-202ENST00000358438 CTSGP08311 255 aa17.19■□□□□ 0.34
POLR2J2-202ENST00000358438 CKS1BP61024 79 aa17.19■□□□□ 0.34
POLR2J2-202ENST00000358438 LOC389332A0A1B0GUA5 103 aa17.19■□□□□ 0.34
POLR2J2-202ENST00000358438 CEND1Q8N111 149 aa17.19■□□□□ 0.34
POLR2J2-202ENST00000358438 PSG8Q9UQ74 426 aa17.19■□□□□ 0.34
POLR2J2-202ENST00000358438 EVI2AP22794 236 aa17.18■□□□□ 0.34
POLR2J2-202ENST00000358438 RAB9AP51151 201 aa17.18■□□□□ 0.34
POLR2J2-202ENST00000358438 MRAP2Q96G30 205 aa17.18■□□□□ 0.34
POLR2J2-202ENST00000358438 MXRA5Q9NR99 2828 aa17.18■□□□□ 0.34
POLR2J2-202ENST00000358438 ZNF469Q96JG9 3925 aaPredicted RBP17.18■□□□□ 0.34
POLR2J2-202ENST00000358438 Q6ZS46 218 aa17.17■□□□□ 0.34
POLR2J2-202ENST00000358438 SERTM2A0A1B0GWG4 89 aa17.16■□□□□ 0.34
POLR2J2-202ENST00000358438 IGLL5B9A064 214 aa17.16■□□□□ 0.34
POLR2J2-202ENST00000358438 MRPL51Q4U2R6 128 aaKnown RBP17.16■□□□□ 0.34
POLR2J2-202ENST00000358438 SHANK2-AS3Q9BTD1 123 aa17.16■□□□□ 0.34
POLR2J2-202ENST00000358438 NOTCH2Q04721 2471 aa17.16■□□□□ 0.34
POLR2J2-202ENST00000358438 PRSS47A8MTI9 375 aa17.16■□□□□ 0.34
POLR2J2-202ENST00000358438 H3BTX0 84 aa17.16■□□□□ 0.34
POLR2J2-202ENST00000358438 CCDC140Q96MF4 163 aa17.16■□□□□ 0.34
POLR2J2-202ENST00000358438 SPAG8Q99932 426 aaPredicted RBP17.16■□□□□ 0.34
POLR2J2-202ENST00000358438 DKK2Q9UBU2 259 aa17.16■□□□□ 0.34
POLR2J2-202ENST00000358438 CLEC3BP05452 202 aa17.15■□□□□ 0.34
POLR2J2-202ENST00000358438 Q6YL49 198 aa17.15■□□□□ 0.34
POLR2J2-202ENST00000358438 EXOC3-AS1Q8N2X6 119 aa17.15■□□□□ 0.34
POLR2J2-202ENST00000358438 EEF1AKMT3Q96AZ1 226 aa17.15■□□□□ 0.34
POLR2J2-202ENST00000358438 HHLA3Q9XRX5 114 aa17.15■□□□□ 0.34
POLR2J2-202ENST00000358438 FLNAP21333 2647 aaKnown RBP17.15■□□□□ 0.34
POLR2J2-202ENST00000358438 TRBV19A0A075B6N1 114 aa17.14■□□□□ 0.33
POLR2J2-202ENST00000358438 H3BRN7 92 aa17.14■□□□□ 0.33
POLR2J2-202ENST00000358438 PPIFP30405 207 aaKnown RBP17.14■□□□□ 0.33
POLR2J2-202ENST00000358438 WFDC2Q14508 124 aa17.14■□□□□ 0.33
POLR2J2-202ENST00000358438 AMN1Q8IY45 258 aa17.14■□□□□ 0.33
POLR2J2-202ENST00000358438 ZNF479Q96JC4 524 aa17.14■□□□□ 0.33
POLR2J2-202ENST00000358438 FOXC2Q99958 501 aa17.14■□□□□ 0.33
POLR2J2-202ENST00000358438 TRBV25-1A0A075B6N4 114 aa17.14■□□□□ 0.33
POLR2J2-202ENST00000358438 TRBV7-1A0A0A6YYK4 115 aa17.14■□□□□ 0.33
POLR2J2-202ENST00000358438 FAM223BA6NKX1 122 aa17.14■□□□□ 0.33
POLR2J2-202ENST00000358438 CRIP1P50238 77 aa17.14■□□□□ 0.33
POLR2J2-202ENST00000358438 ODF1Q14990 250 aa17.14■□□□□ 0.33
POLR2J2-202ENST00000358438 TM4SF20Q53R12 229 aa17.14■□□□□ 0.33
POLR2J2-202ENST00000358438 LYZL1Q6UWQ5 148 aa17.14■□□□□ 0.33
POLR2J2-202ENST00000358438 FAM223AQ8IWN6 122 aa17.14■□□□□ 0.33
POLR2J2-202ENST00000358438 C18orf15Q96N68 181 aa17.14■□□□□ 0.33
POLR2J2-202ENST00000358438 ATP5G2Q06055 141 aa17.13■□□□□ 0.33
POLR2J2-202ENST00000358438 NHP2Q9NX24 153 aaKnown RBP17.13■□□□□ 0.33
POLR2J2-202ENST00000358438 ATP5LO75964 103 aa17.12■□□□□ 0.33
POLR2J2-202ENST00000358438 TRGV3P03979 118 aa17.12■□□□□ 0.33
POLR2J2-202ENST00000358438 CLEC19AQ6UXS0 136 aa17.12■□□□□ 0.33
POLR2J2-202ENST00000358438 COX8CQ7Z4L0 72 aa17.12■□□□□ 0.33
POLR2J2-202ENST00000358438 S100A7AQ86SG5 101 aa17.12■□□□□ 0.33
POLR2J2-202ENST00000358438 VPREB3Q9UKI3 123 aa17.12■□□□□ 0.33
POLR2J2-202ENST00000358438 AKAP9Q99996 3911 aa17.12■□□□□ 0.33
POLR2J2-202ENST00000358438 BRI3O95415 125 aa17.12■□□□□ 0.33
POLR2J2-202ENST00000358438 IGKCP01834 107 aa17.12■□□□□ 0.33
POLR2J2-202ENST00000358438 FCER1GP30273 86 aa17.12■□□□□ 0.33
POLR2J2-202ENST00000358438 CKS2P33552 79 aa17.12■□□□□ 0.33
POLR2J2-202ENST00000358438 H3BUA1 57 aa17.11■□□□□ 0.33
POLR2J2-202ENST00000358438 SIGLEC15Q6ZMC9 328 aa17.11■□□□□ 0.33
POLR2J2-202ENST00000358438 LCNL1Q6ZST4 164 aa17.11■□□□□ 0.33
POLR2J2-202ENST00000358438 TPPP3Q9BW30 176 aa17.11■□□□□ 0.33
POLR2J2-202ENST00000358438 MAP1LC3AQ9H492 121 aa17.11■□□□□ 0.33
POLR2J2-202ENST00000358438 SETXQ7Z333 2677 aaKnown RBP17.11■□□□□ 0.33
POLR2J2-202ENST00000358438 IGKV2D-26A0A0A0MRZ7 120 aa17.11■□□□□ 0.33
POLR2J2-202ENST00000358438 K7ERJ3 54 aa17.11■□□□□ 0.33
POLR2J2-202ENST00000358438 TCTAP57738 103 aa17.11■□□□□ 0.33
POLR2J2-202ENST00000358438 GAGE13Q4V321 117 aa17.11■□□□□ 0.33
POLR2J2-202ENST00000358438 ATP6V0E2Q8NHE4 81 aa17.11■□□□□ 0.33
POLR2J2-202ENST00000358438 IGHV3-35A0A0C4DH35 117 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms