RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 TOMM6Q96B49 74 aa13.52□□□□□ -0.25
RTN4-204ENST00000357732 C16orf92Q96LL3 132 aa13.52□□□□□ -0.25
RTN4-204ENST00000357732 RAXQ9Y2V3 346 aa13.52□□□□□ -0.25
RTN4-204ENST00000357732 FOXI2Q6ZQN5 318 aa13.51□□□□□ -0.25
RTN4-204ENST00000357732 TRAV21A0A0B4J279 112 aa13.51□□□□□ -0.25
RTN4-204ENST00000357732 IGLL5B9A064 214 aa13.51□□□□□ -0.25
RTN4-204ENST00000357732 OVOL1O14753 267 aa13.51□□□□□ -0.25
RTN4-204ENST00000357732 KLRB1Q12918 225 aa13.51□□□□□ -0.25
RTN4-204ENST00000357732 C5orf56Q8N8D9 126 aa13.51□□□□□ -0.25
RTN4-204ENST00000357732 TRAV26-2A0A0B4J265 109 aa13.5□□□□□ -0.25
RTN4-204ENST00000357732 TRBV7-9A0A0J9YWB2 115 aa13.5□□□□□ -0.25
RTN4-204ENST00000357732 A0A1B0GWB2 263 aa13.5□□□□□ -0.25
RTN4-204ENST00000357732 A0A1W2PPR1 153 aa13.5□□□□□ -0.25
RTN4-204ENST00000357732 LINC01549A6NIU2 74 aa13.5□□□□□ -0.25
RTN4-204ENST00000357732 SUMO2P61956 95 aaKnown RBP13.5□□□□□ -0.25
RTN4-204ENST00000357732 DPH3P1Q9H4G8 78 aa13.5□□□□□ -0.25
RTN4-204ENST00000357732 G3V318 75 aa13.5□□□□□ -0.25
RTN4-204ENST00000357732 H3BVH4 76 aa13.5□□□□□ -0.25
RTN4-204ENST00000357732 RIPPLY3P57055 190 aa13.5□□□□□ -0.25
RTN4-204ENST00000357732 MAPKAPK5-AS1Q8N8E1 139 aa13.5□□□□□ -0.25
RTN4-204ENST00000357732 ZNF479Q96JC4 524 aa13.5□□□□□ -0.25
RTN4-204ENST00000357732 OR11H12B2RN74 326 aa13.49□□□□□ -0.25
RTN4-204ENST00000357732 J3QR89 54 aa13.49□□□□□ -0.25
RTN4-204ENST00000357732 K7ERJ3 54 aa13.49□□□□□ -0.25
RTN4-204ENST00000357732 C12orf74Q32Q52 190 aa13.49□□□□□ -0.25
RTN4-204ENST00000357732 C19orf54Q5BKX5 351 aa13.49□□□□□ -0.25
RTN4-204ENST00000357732 OR11H1Q8NG94 326 aa13.49□□□□□ -0.25
RTN4-204ENST00000357732 OR11H2Q8NH07 326 aa13.49□□□□□ -0.25
RTN4-204ENST00000357732 CHTOPQ9Y3Y2 248 aaKnown RBP13.49□□□□□ -0.25
RTN4-204ENST00000357732 ASH1LQ9NR48 2969 aaKnown RBP13.48□□□□□ -0.25
RTN4-204ENST00000357732 TRBV7-3A0A075B6L6 115 aa13.48□□□□□ -0.25
RTN4-204ENST00000357732 MYMXA0A1B0GTQ4 84 aa13.48□□□□□ -0.25
RTN4-204ENST00000357732 NPFFO15130 113 aa13.48□□□□□ -0.25
RTN4-204ENST00000357732 BRI3O95415 125 aa13.48□□□□□ -0.25
RTN4-204ENST00000357732 NEXN-AS1Q8NBZ9 246 aa13.48□□□□□ -0.25
RTN4-204ENST00000357732 OR10J6PQ8NGY7 276 aa13.48□□□□□ -0.25
RTN4-204ENST00000357732 SCGB3A1Q96QR1 104 aa13.48□□□□□ -0.25
RTN4-204ENST00000357732 HIST1H4GQ99525 98 aa13.48□□□□□ -0.25
RTN4-204ENST00000357732 EFNA4P52798 201 aa13.47□□□□□ -0.25
RTN4-204ENST00000357732 UCNP55089 124 aa13.47□□□□□ -0.25
RTN4-204ENST00000357732 NBASA2RRP1 2371 aa13.47□□□□□ -0.25
RTN4-204ENST00000357732 IGHV3OR16-13A0A075B7E8 117 aa13.47□□□□□ -0.25
RTN4-204ENST00000357732 IGHV3-74A0A0B4J1X5 117 aa13.47□□□□□ -0.25
RTN4-204ENST00000357732 TRAV41A0A0B4J266 112 aa13.47□□□□□ -0.25
RTN4-204ENST00000357732 ASIPP42127 132 aa13.47□□□□□ -0.25
RTN4-204ENST00000357732 ZFAND2AQ8N6M9 145 aa13.47□□□□□ -0.25
RTN4-204ENST00000357732 MOB4Q9Y3A3 225 aa13.47□□□□□ -0.25
RTN4-204ENST00000357732 TMEM238C9JI98 176 aa13.46□□□□□ -0.25
RTN4-204ENST00000357732 NDUFA4O00483 81 aa13.46□□□□□ -0.25
RTN4-204ENST00000357732 RPL24P83731 157 aaKnown RBP13.46□□□□□ -0.25
RTN4-204ENST00000357732 APRG1Q8IVJ8 170 aa13.46□□□□□ -0.25
RTN4-204ENST00000357732 TEX48A0A1B0GUV7 120 aa13.46□□□□□ -0.25
RTN4-204ENST00000357732 SCGB1A1P11684 91 aa13.46□□□□□ -0.25
RTN4-204ENST00000357732 PRR9Q5T870 116 aa13.46□□□□□ -0.25
RTN4-204ENST00000357732 RASL10AQ92737 203 aa13.46□□□□□ -0.25
RTN4-204ENST00000357732 IGF2RP11717 2491 aa13.45□□□□□ -0.26
RTN4-204ENST00000357732 RPL32P62910 135 aaKnown RBP13.45□□□□□ -0.26
RTN4-204ENST00000357732 RRN3P1Q2M238 152 aa13.45□□□□□ -0.26
RTN4-204ENST00000357732 POM121L12Q8N7R1 296 aa13.45□□□□□ -0.26
RTN4-204ENST00000357732 LINC01548A6NM66 108 aa13.45□□□□□ -0.26
RTN4-204ENST00000357732 S100A4P26447 101 aaKnown RBP13.45□□□□□ -0.26
RTN4-204ENST00000357732 ARL3P36405 182 aa13.45□□□□□ -0.26
RTN4-204ENST00000357732 FAM19A4Q96LR4 140 aa13.45□□□□□ -0.26
RTN4-204ENST00000357732 IGHV3-49A0A0A0MS15 119 aa13.44□□□□□ -0.26
RTN4-204ENST00000357732 H3BUA1 57 aa13.44□□□□□ -0.26
RTN4-204ENST00000357732 SOCS3O14543 225 aa13.44□□□□□ -0.26
RTN4-204ENST00000357732 PHLDA3Q9Y5J5 127 aa13.44□□□□□ -0.26
RTN4-204ENST00000357732 ATRXP46100 2492 aa13.44□□□□□ -0.26
RTN4-204ENST00000357732 LMO4P61968 165 aa13.44□□□□□ -0.26
RTN4-204ENST00000357732 C20orf173Q96LM9 149 aa13.44□□□□□ -0.26
RTN4-204ENST00000357732 IGHV1-69DA0A0B4J2H0 117 aa13.43□□□□□ -0.26
RTN4-204ENST00000357732 TMEM238LA0A1B0GVL6 79 aa13.43□□□□□ -0.26
RTN4-204ENST00000357732 A6NJY4 79 aa13.43□□□□□ -0.26
RTN4-204ENST00000357732 PAPPA-AS1Q5QFB9 102 aa13.43□□□□□ -0.26
RTN4-204ENST00000357732 SPOCK3Q9BQ16 436 aa13.43□□□□□ -0.26
RTN4-204ENST00000357732 SPANXB1Q9NS25 103 aaPredicted RBP13.43□□□□□ -0.26
RTN4-204ENST00000357732 SELENOKQ9Y6D0 94 aa13.43□□□□□ -0.26
RTN4-204ENST00000357732 NXPH4O95158 308 aa13.43□□□□□ -0.26
RTN4-204ENST00000357732 C2orf66Q6UXQ4 117 aa13.42□□□□□ -0.26
RTN4-204ENST00000357732 GPHB5Q86YW7 130 aa13.42□□□□□ -0.26
RTN4-204ENST00000357732 BAALCQ8WXS3 180 aa13.42□□□□□ -0.26
RTN4-204ENST00000357732 USMG5Q96IX5 58 aa13.42□□□□□ -0.26
RTN4-204ENST00000357732 UBTD1Q9HAC8 227 aa13.42□□□□□ -0.26
RTN4-204ENST00000357732 IGF1P05019 195 aa13.41□□□□□ -0.26
RTN4-204ENST00000357732 Q6ZQT7 251 aa13.41□□□□□ -0.26
RTN4-204ENST00000357732 WNK2Q9Y3S1 2297 aa13.4□□□□□ -0.26
RTN4-204ENST00000357732 MED13LQ71F56 2210 aa13.4□□□□□ -0.26
RTN4-204ENST00000357732 RNF223E7ERA6 249 aa13.4□□□□□ -0.26
RTN4-204ENST00000357732 CD300EQ496F6 205 aaPredicted RBP13.4□□□□□ -0.26
RTN4-204ENST00000357732 IGHV4OR15-8A0A075B7B6 117 aa13.39□□□□□ -0.27
RTN4-204ENST00000357732 A0A087WW49 117 aa13.39□□□□□ -0.27
RTN4-204ENST00000357732 LGALS1P09382 135 aaKnown RBP13.39□□□□□ -0.27
RTN4-204ENST00000357732 ANXA2RQ3ZCQ2 193 aa13.39□□□□□ -0.27
RTN4-204ENST00000357732 GAGE13Q4V321 117 aa13.39□□□□□ -0.27
RTN4-204ENST00000357732 C14orf178Q8N769 122 aaPredicted RBP13.39□□□□□ -0.27
RTN4-204ENST00000357732 HOXA3O43365 443 aaPredicted RBP13.39□□□□□ -0.27
RTN4-204ENST00000357732 SAMD13Q5VXD3 122 aa13.39□□□□□ -0.27
RTN4-204ENST00000357732 SIGMAR1Q99720 223 aa13.38□□□□□ -0.27
RTN4-204ENST00000357732 PRADC1Q9BSG0 188 aa13.38□□□□□ -0.27
RTN4-204ENST00000357732 BPESC1Q9GZL8 116 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms