RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 TRBV20OR9-2A0A075B6H5 130 aa6.8□□□□□ -1.32
UPF2-202ENST00000357604 ARMS2P0C7Q2 107 aa6.8□□□□□ -1.32
UPF2-202ENST00000357604 RPS10P46783 165 aaKnown RBP6.8□□□□□ -1.32
UPF2-202ENST00000357604 TTC32Q5I0X7 151 aa6.8□□□□□ -1.32
UPF2-202ENST00000357604 K7EQD1 137 aa6.79□□□□□ -1.32
UPF2-202ENST00000357604 MORN5Q5VZ52 161 aa6.79□□□□□ -1.32
UPF2-202ENST00000357604 TRAV8-1A0A0A6YYK1 113 aa6.79□□□□□ -1.32
UPF2-202ENST00000357604 C20orf202A1L168 122 aa6.79□□□□□ -1.32
UPF2-202ENST00000357604 C3orf84H3BNL1 204 aa6.79□□□□□ -1.32
UPF2-202ENST00000357604 FAM231DQ6ZW35 169 aa6.79□□□□□ -1.32
UPF2-202ENST00000357604 MRAP2Q96G30 205 aa6.79□□□□□ -1.32
UPF2-202ENST00000357604 PRAC2D3DTV9 90 aa6.79□□□□□ -1.32
UPF2-202ENST00000357604 SOCS3O14543 225 aa6.79□□□□□ -1.32
UPF2-202ENST00000357604 SPINK4O60575 86 aa6.79□□□□□ -1.32
UPF2-202ENST00000357604 RASL11AQ6T310 242 aa6.79□□□□□ -1.32
UPF2-202ENST00000357604 A0A087WWC5 75 aa6.78□□□□□ -1.32
UPF2-202ENST00000357604 CD300CQ08708 224 aa6.78□□□□□ -1.32
UPF2-202ENST00000357604 SAMD10Q9BYL1 202 aa6.78□□□□□ -1.32
UPF2-202ENST00000357604 A0A087WX48 190 aa6.78□□□□□ -1.32
UPF2-202ENST00000357604 KRTAP10-11P60412 298 aa6.78□□□□□ -1.32
UPF2-202ENST00000357604 FAM24BQ8N5W8 94 aa6.78□□□□□ -1.32
UPF2-202ENST00000357604 CLRN3Q8NCR9 226 aa6.78□□□□□ -1.32
UPF2-202ENST00000357604 LYZL1Q6UWQ5 148 aa6.78□□□□□ -1.32
UPF2-202ENST00000357604 OCC1Q8TAD7 63 aa6.78□□□□□ -1.32
UPF2-202ENST00000357604 ZC2HC1AQ96GY0 325 aa6.78□□□□□ -1.32
UPF2-202ENST00000357604 CHCHD5Q9BSY4 110 aa6.78□□□□□ -1.32
UPF2-202ENST00000357604 WIPF1O43516 503 aa6.78□□□□□ -1.32
UPF2-202ENST00000357604 FAM222AQ5U5X8 452 aa6.78□□□□□ -1.32
UPF2-202ENST00000357604 C2orf88Q9BSF0 95 aa6.78□□□□□ -1.32
UPF2-202ENST00000357604 WFDC10AQ9H1F0 79 aa6.78□□□□□ -1.32
UPF2-202ENST00000357604 KLF12Q9Y4X4 402 aa6.78□□□□□ -1.32
UPF2-202ENST00000357604 BTF3P20290 206 aaKnown RBP6.77□□□□□ -1.33
UPF2-202ENST00000357604 RNASEKQ6P5S7 137 aaKnown RBP6.77□□□□□ -1.33
UPF2-202ENST00000357604 TRBV25-1A0A075B6N4 114 aa6.77□□□□□ -1.33
UPF2-202ENST00000357604 HIGD1CA8MV81 97 aa6.77□□□□□ -1.33
UPF2-202ENST00000357604 RPL23P62829 140 aaKnown RBP6.77□□□□□ -1.33
UPF2-202ENST00000357604 ISOC2Q96AB3 205 aa6.77□□□□□ -1.33
UPF2-202ENST00000357604 IGHV3-73A0A0B4J1V6 119 aa6.77□□□□□ -1.33
UPF2-202ENST00000357604 RBMY1BA6NDE4 496 aaKnown RBP6.77□□□□□ -1.33
UPF2-202ENST00000357604 RBMY1EA6NEQ0 496 aaKnown RBP6.77□□□□□ -1.33
UPF2-202ENST00000357604 RBMY1DP0C7P1 496 aaKnown RBP6.77□□□□□ -1.33
UPF2-202ENST00000357604 RAB4AP20338 218 aa6.77□□□□□ -1.33
UPF2-202ENST00000357604 HHLA3Q9XRX5 114 aa6.77□□□□□ -1.33
UPF2-202ENST00000357604 K7EIL1 84 aa6.77□□□□□ -1.33
UPF2-202ENST00000357604 EDN2P20800 178 aa6.77□□□□□ -1.33
UPF2-202ENST00000357604 RNASE7Q9H1E1 156 aaKnown RBP6.77□□□□□ -1.33
UPF2-202ENST00000357604 PRO0255Q9UI72 69 aa6.77□□□□□ -1.33
UPF2-202ENST00000357604 LAMTOR2Q9Y2Q5 125 aa6.77□□□□□ -1.33
UPF2-202ENST00000357604 HSBP1L1C9JCN9 74 aa6.76□□□□□ -1.33
UPF2-202ENST00000357604 NDUFA6P56556 154 aa6.76□□□□□ -1.33
UPF2-202ENST00000357604 FAM3BP58499 235 aaPredicted RBP6.76□□□□□ -1.33
UPF2-202ENST00000357604 ZNF124Q15973 351 aa6.76□□□□□ -1.33
UPF2-202ENST00000357604 ZFP2Q6ZN57 461 aa6.76□□□□□ -1.33
UPF2-202ENST00000357604 Q8N1Y9 231 aa6.76□□□□□ -1.33
UPF2-202ENST00000357604 ALKBH7Q9BT30 221 aaPredicted RBP6.76□□□□□ -1.33
UPF2-202ENST00000357604 C19orf73Q9NVV2 129 aa6.76□□□□□ -1.33
UPF2-202ENST00000357604 ATP6V1G1O75348 118 aa6.76□□□□□ -1.33
UPF2-202ENST00000357604 AMTP48728 403 aa6.76□□□□□ -1.33
UPF2-202ENST00000357604 KPRPQ5T749 579 aaPredicted RBP6.76□□□□□ -1.33
UPF2-202ENST00000357604 PTPN13Q12923 2485 aa6.76□□□□□ -1.33
UPF2-202ENST00000357604 ABCA1O95477 2261 aa6.76□□□□□ -1.33
UPF2-202ENST00000357604 DAZ2Q13117 558 aaKnown RBP6.76□□□□□ -1.33
UPF2-202ENST00000357604 ZFYVE26Q68DK2 2539 aa6.76□□□□□ -1.33
UPF2-202ENST00000357604 MRPS12O15235 138 aaKnown RBP6.75□□□□□ -1.33
UPF2-202ENST00000357604 DMRTA1Q5VZB9 504 aa6.75□□□□□ -1.33
UPF2-202ENST00000357604 C10orf126Q8N4M7 172 aa6.75□□□□□ -1.33
UPF2-202ENST00000357604 PRELID3AQ96N28 172 aa6.75□□□□□ -1.33
UPF2-202ENST00000357604 TM2D2Q9BX73 214 aa6.75□□□□□ -1.33
UPF2-202ENST00000357604 DEFB4AO15263 64 aa6.75□□□□□ -1.33
UPF2-202ENST00000357604 ORMDL3Q8N138 153 aa6.75□□□□□ -1.33
UPF2-202ENST00000357604 EYSQ5T1H1 3165 aa6.75□□□□□ -1.33
UPF2-202ENST00000357604 GAGE12JA6NER3 117 aa6.75□□□□□ -1.33
UPF2-202ENST00000357604 GAGE1Q13065 139 aa6.75□□□□□ -1.33
UPF2-202ENST00000357604 GAGE4Q13068 117 aa6.75□□□□□ -1.33
UPF2-202ENST00000357604 GAGE5Q13069 117 aa6.75□□□□□ -1.33
UPF2-202ENST00000357604 GAGE13Q4V321 117 aa6.75□□□□□ -1.33
UPF2-202ENST00000357604 GNRH2O43555 120 aa6.75□□□□□ -1.33
UPF2-202ENST00000357604 PIK3CD-AS1Q5SR53 167 aa6.75□□□□□ -1.33
UPF2-202ENST00000357604 A0A0J9YY99 117 aa6.74□□□□□ -1.33
UPF2-202ENST00000357604 VCYO14598 125 aa6.74□□□□□ -1.33
UPF2-202ENST00000357604 GYPEP15421 78 aa6.74□□□□□ -1.33
UPF2-202ENST00000357604 IGHV3-16A0A0C4DH30 117 aa6.74□□□□□ -1.33
UPF2-202ENST00000357604 IGHV1-24A0A0C4DH33 117 aa6.74□□□□□ -1.33
UPF2-202ENST00000357604 KLLNB2CW77 178 aa6.74□□□□□ -1.33
UPF2-202ENST00000357604 GDF5OSQ5U4N7 250 aa6.74□□□□□ -1.33
UPF2-202ENST00000357604 ZFAND6Q6FIF0 208 aa6.74□□□□□ -1.33
UPF2-202ENST00000357604 NEGR1Q7Z3B1 354 aa6.74□□□□□ -1.33
UPF2-202ENST00000357604 ARHGAP32A7KAX9 2087 aa6.74□□□□□ -1.33
UPF2-202ENST00000357604 DAZ4Q86SG3 579 aaKnown RBP6.74□□□□□ -1.33
UPF2-202ENST00000357604 ZNF503Q96F45 646 aa6.74□□□□□ -1.33
UPF2-202ENST00000357604 DAZ3Q9NR90 486 aaKnown RBP6.74□□□□□ -1.33
UPF2-202ENST00000357604 C7orf77A4D0Y5 90 aa6.74□□□□□ -1.33
UPF2-202ENST00000357604 NFE4Q86UQ8 179 aa6.74□□□□□ -1.33
UPF2-202ENST00000357604 SBSPONQ8IVN8 264 aa6.74□□□□□ -1.33
UPF2-202ENST00000357604 RETNQ9HD89 108 aa6.74□□□□□ -1.33
UPF2-202ENST00000357604 A0A087WWL8 130 aa6.73□□□□□ -1.33
UPF2-202ENST00000357604 PRB4P10163 310 aaPredicted RBP6.73□□□□□ -1.33
UPF2-202ENST00000357604 ORMDL2Q53FV1 153 aa6.73□□□□□ -1.33
UPF2-202ENST00000357604 LINC01551Q86U37 167 aa6.73□□□□□ -1.33
UPF2-202ENST00000357604 C14orf178Q8N769 122 aaPredicted RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms