RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 LINC01560Q8TB33 94 aa6.42□□□□□ -1.38
CDC42SE1-201ENST00000357235 TMEM160Q9NX00 188 aa6.42□□□□□ -1.38
CDC42SE1-201ENST00000357235 DCHS2Q6V1P9 2916 aa6.41□□□□□ -1.38
CDC42SE1-201ENST00000357235 CEP295Q9C0D2 2601 aa6.41□□□□□ -1.38
CDC42SE1-201ENST00000357235 NBR2O15453 112 aa6.41□□□□□ -1.38
CDC42SE1-201ENST00000357235 HOXA3O43365 443 aaPredicted RBP6.41□□□□□ -1.38
CDC42SE1-201ENST00000357235 PVRIGQ6DKI7 326 aa6.41□□□□□ -1.38
CDC42SE1-201ENST00000357235 C8orf31Q8N9H6 132 aa6.41□□□□□ -1.38
CDC42SE1-201ENST00000357235 AJUBAQ96IF1 538 aa6.41□□□□□ -1.38
CDC42SE1-201ENST00000357235 PRR25Q96S07 402 aa6.41□□□□□ -1.38
CDC42SE1-201ENST00000357235 FOXC2Q99958 501 aa6.41□□□□□ -1.38
CDC42SE1-201ENST00000357235 HHLA3Q9XRX5 114 aa6.41□□□□□ -1.38
CDC42SE1-201ENST00000357235 CSDC2Q9Y534 153 aaKnown RBP6.41□□□□□ -1.38
CDC42SE1-201ENST00000357235 SPTAN1Q13813 2472 aaKnown RBP6.41□□□□□ -1.38
CDC42SE1-201ENST00000357235 SHISA9B4DS77 424 aa6.41□□□□□ -1.38
CDC42SE1-201ENST00000357235 HOXB4P17483 251 aaPredicted RBP6.41□□□□□ -1.38
CDC42SE1-201ENST00000357235 MFAP4P55083 255 aa6.41□□□□□ -1.38
CDC42SE1-201ENST00000357235 TMEM126AQ9H061 195 aa6.41□□□□□ -1.38
CDC42SE1-201ENST00000357235 TRAV4A0A0B4J268 109 aa6.4□□□□□ -1.38
CDC42SE1-201ENST00000357235 CEACAM4O75871 244 aa6.4□□□□□ -1.38
CDC42SE1-201ENST00000357235 IGKCP01834 107 aa6.4□□□□□ -1.38
CDC42SE1-201ENST00000357235 PRR30Q53SZ7 412 aaPredicted RBP6.4□□□□□ -1.38
CDC42SE1-201ENST00000357235 ZC2HC1BQ5TFG8 222 aa6.4□□□□□ -1.38
CDC42SE1-201ENST00000357235 RNF182Q8N6D2 247 aa6.4□□□□□ -1.38
CDC42SE1-201ENST00000357235 NRGNQ92686 78 aa6.4□□□□□ -1.38
CDC42SE1-201ENST00000357235 C21orf62Q9NYP8 219 aa6.4□□□□□ -1.38
CDC42SE1-201ENST00000357235 KAAG1Q9UBP8 84 aa6.4□□□□□ -1.38
CDC42SE1-201ENST00000357235 BSNQ9UPA5 3926 aa6.4□□□□□ -1.38
CDC42SE1-201ENST00000357235 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.4□□□□□ -1.39
CDC42SE1-201ENST00000357235 A8MWV9 139 aa6.4□□□□□ -1.39
CDC42SE1-201ENST00000357235 SFTA2Q6UW10 78 aa6.4□□□□□ -1.39
CDC42SE1-201ENST00000357235 ZNF493Q6ZR52 646 aa6.4□□□□□ -1.39
CDC42SE1-201ENST00000357235 LYPD1Q8N2G4 141 aa6.4□□□□□ -1.39
CDC42SE1-201ENST00000357235 KLK15Q9H2R5 256 aa6.4□□□□□ -1.39
CDC42SE1-201ENST00000357235 COL6A6A6NMZ7 2263 aa6.4□□□□□ -1.39
CDC42SE1-201ENST00000357235 TRAV26-2A0A0B4J265 109 aa6.39□□□□□ -1.39
CDC42SE1-201ENST00000357235 H3BVH4 76 aa6.39□□□□□ -1.39
CDC42SE1-201ENST00000357235 RPL7P18124 248 aaKnown RBP6.39□□□□□ -1.39
CDC42SE1-201ENST00000357235 MORN3Q6PF18 240 aaPredicted RBP6.39□□□□□ -1.39
CDC42SE1-201ENST00000357235 IGFL3Q6UXB1 125 aa6.39□□□□□ -1.39
CDC42SE1-201ENST00000357235 TMEM158Q8WZ71 300 aa6.39□□□□□ -1.39
CDC42SE1-201ENST00000357235 WI2-2373I1.2A0A1W2PRP0 233 aa6.39□□□□□ -1.39
CDC42SE1-201ENST00000357235 CD3EP07766 207 aa6.39□□□□□ -1.39
CDC42SE1-201ENST00000357235 PIP4P1Q86T03 277 aa6.39□□□□□ -1.39
CDC42SE1-201ENST00000357235 DPM3Q9P2X0 92 aa6.39□□□□□ -1.39
CDC42SE1-201ENST00000357235 TRAV8-2A0A0B4J237 113 aa6.39□□□□□ -1.39
CDC42SE1-201ENST00000357235 LINC01548A6NM66 108 aa6.39□□□□□ -1.39
CDC42SE1-201ENST00000357235 TNFRSF6BO95407 300 aa6.39□□□□□ -1.39
CDC42SE1-201ENST00000357235 ASIPP42127 132 aa6.39□□□□□ -1.39
CDC42SE1-201ENST00000357235 LYRM7Q5U5X0 104 aa6.39□□□□□ -1.39
CDC42SE1-201ENST00000357235 TRAV40A0A0B4J280 105 aa6.38□□□□□ -1.39
CDC42SE1-201ENST00000357235 PRAC2D3DTV9 90 aa6.38□□□□□ -1.39
CDC42SE1-201ENST00000357235 MRPS12O15235 138 aaKnown RBP6.38□□□□□ -1.39
CDC42SE1-201ENST00000357235 DPM2O94777 84 aa6.38□□□□□ -1.39
CDC42SE1-201ENST00000357235 NDPQ00604 133 aa6.38□□□□□ -1.39
CDC42SE1-201ENST00000357235 NCOR2Q9Y618 2525 aa6.38□□□□□ -1.39
CDC42SE1-201ENST00000357235 TRAV25A0A0B4J276 109 aa6.38□□□□□ -1.39
CDC42SE1-201ENST00000357235 SPRY2O43597 315 aa6.38□□□□□ -1.39
CDC42SE1-201ENST00000357235 NDUFA3O95167 84 aa6.38□□□□□ -1.39
CDC42SE1-201ENST00000357235 HLA-DRB4P13762 266 aa6.38□□□□□ -1.39
CDC42SE1-201ENST00000357235 PDE6HQ13956 83 aa6.38□□□□□ -1.39
CDC42SE1-201ENST00000357235 ECSCRQ19T08 205 aa6.38□□□□□ -1.39
CDC42SE1-201ENST00000357235 IL17RELQ6ZVW7 336 aa6.38□□□□□ -1.39
CDC42SE1-201ENST00000357235 MAPKAPK5-AS1Q8N8E1 139 aa6.38□□□□□ -1.39
CDC42SE1-201ENST00000357235 FANCD2OSQ96PS1 177 aa6.38□□□□□ -1.39
CDC42SE1-201ENST00000357235 ZMAT4Q9H898 229 aa6.38□□□□□ -1.39
CDC42SE1-201ENST00000357235 HLA-DRB4X5D2U9 266 aa6.38□□□□□ -1.39
CDC42SE1-201ENST00000357235 CRLF1O75462 422 aa6.37□□□□□ -1.39
CDC42SE1-201ENST00000357235 Q6Q795 121 aa6.37□□□□□ -1.39
CDC42SE1-201ENST00000357235 ZFP2Q6ZN57 461 aa6.37□□□□□ -1.39
CDC42SE1-201ENST00000357235 DYNAPQ8N1N2 210 aa6.37□□□□□ -1.39
CDC42SE1-201ENST00000357235 ANKRD29Q8N6D5 301 aa6.37□□□□□ -1.39
CDC42SE1-201ENST00000357235 C3orf56Q8N813 242 aa6.37□□□□□ -1.39
CDC42SE1-201ENST00000357235 DEFB104AQ8WTQ1 72 aa6.37□□□□□ -1.39
CDC42SE1-201ENST00000357235 TRBV6-1A0A0K0K1D8 114 aa6.37□□□□□ -1.39
CDC42SE1-201ENST00000357235 LINC01549A6NIU2 74 aa6.37□□□□□ -1.39
CDC42SE1-201ENST00000357235 GRNP28799 593 aaKnown RBP6.37□□□□□ -1.39
CDC42SE1-201ENST00000357235 ZNF672Q499Z4 452 aaPredicted RBP6.37□□□□□ -1.39
CDC42SE1-201ENST00000357235 GATD1Q8NB37 220 aa6.37□□□□□ -1.39
CDC42SE1-201ENST00000357235 OR10J6PQ8NGY7 276 aa6.37□□□□□ -1.39
CDC42SE1-201ENST00000357235 U3KQK5 164 aa6.37□□□□□ -1.39
CDC42SE1-201ENST00000357235 ATRXP46100 2492 aa6.37□□□□□ -1.39
CDC42SE1-201ENST00000357235 TRBV7-3A0A075B6L6 115 aa6.36□□□□□ -1.39
CDC42SE1-201ENST00000357235 MYMXA0A1B0GTQ4 84 aa6.36□□□□□ -1.39
CDC42SE1-201ENST00000357235 B9A039 149 aa6.36□□□□□ -1.39
CDC42SE1-201ENST00000357235 IGHG4P01861 327 aa6.36□□□□□ -1.39
CDC42SE1-201ENST00000357235 TRGV3P03979 118 aa6.36□□□□□ -1.39
CDC42SE1-201ENST00000357235 SCGB1C2P0DMR2 95 aa6.36□□□□□ -1.39
CDC42SE1-201ENST00000357235 FOXC1Q12948 553 aa6.36□□□□□ -1.39
CDC42SE1-201ENST00000357235 DTX2Q86UW9 622 aa6.36□□□□□ -1.39
CDC42SE1-201ENST00000357235 DNAJC30Q96LL9 226 aa6.36□□□□□ -1.39
CDC42SE1-201ENST00000357235 UBTD1Q9HAC8 227 aa6.36□□□□□ -1.39
CDC42SE1-201ENST00000357235 MRPL35Q9NZE8 188 aaKnown RBP6.36□□□□□ -1.39
CDC42SE1-201ENST00000357235 EFNA4P52798 201 aa6.36□□□□□ -1.39
CDC42SE1-201ENST00000357235 PAX8Q06710 450 aa6.36□□□□□ -1.39
CDC42SE1-201ENST00000357235 Q6ZQT7 251 aa6.36□□□□□ -1.39
CDC42SE1-201ENST00000357235 RASL10AQ92737 203 aa6.36□□□□□ -1.39
CDC42SE1-201ENST00000357235 IGLV11-55A0A075B6I3 123 aa6.36□□□□□ -1.39
CDC42SE1-201ENST00000357235 SMIM9A6NGZ8 99 aa6.36□□□□□ -1.39
CDC42SE1-201ENST00000357235 SPANXN1Q5VSR9 72 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms