RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 ARTNQ5T4W7 220 aa12.7□□□□□ -0.38
RXRA-201ENST00000356384 NOTCH3Q9UM47 2321 aa12.7□□□□□ -0.38
RXRA-201ENST00000356384 K7ENP7 123 aa12.69□□□□□ -0.38
RXRA-201ENST00000356384 CFC1BP0CG36 223 aa12.69□□□□□ -0.38
RXRA-201ENST00000356384 CFC1P0CG37 223 aa12.69□□□□□ -0.38
RXRA-201ENST00000356384 J3QKU1 62 aa12.69□□□□□ -0.38
RXRA-201ENST00000356384 C17orf77Q96MU5 243 aa12.69□□□□□ -0.38
RXRA-201ENST00000356384 K7EM74 188 aa12.69□□□□□ -0.38
RXRA-201ENST00000356384 SRSF2Q01130 221 aaKnown RBP12.69□□□□□ -0.38
RXRA-201ENST00000356384 LINC00311Q8N616 119 aa12.69□□□□□ -0.38
RXRA-201ENST00000356384 PKDREJQ9NTG1 2253 aa12.69□□□□□ -0.38
RXRA-201ENST00000356384 CHKB-CPT1BH3BT56 60 aa12.68□□□□□ -0.38
RXRA-201ENST00000356384 J3QLI3 93 aa12.68□□□□□ -0.38
RXRA-201ENST00000356384 BUB3O43684 328 aa12.68□□□□□ -0.38
RXRA-201ENST00000356384 C5orf38Q86SI9 138 aa12.68□□□□□ -0.38
RXRA-201ENST00000356384 FOXE3Q13461 319 aa12.68□□□□□ -0.38
RXRA-201ENST00000356384 SLC25A29Q8N8R3 303 aa12.68□□□□□ -0.38
RXRA-201ENST00000356384 SPRY2O43597 315 aa12.67□□□□□ -0.38
RXRA-201ENST00000356384 DYNAPQ8N1N2 210 aa12.67□□□□□ -0.38
RXRA-201ENST00000356384 TRAV4A0A0B4J268 109 aa12.67□□□□□ -0.38
RXRA-201ENST00000356384 NCOR1P1Q9H4R4 102 aa12.67□□□□□ -0.38
RXRA-201ENST00000356384 ETDCA0A1B0GVM5 59 aa12.67□□□□□ -0.38
RXRA-201ENST00000356384 ELANEP08246 267 aa12.67□□□□□ -0.38
RXRA-201ENST00000356384 FOXI2Q6ZQN5 318 aa12.67□□□□□ -0.38
RXRA-201ENST00000356384 C15orf65H3BRN8 121 aa12.67□□□□□ -0.38
RXRA-201ENST00000356384 CCL25O15444 150 aa12.67□□□□□ -0.38
RXRA-201ENST00000356384 SIVA1O15304 175 aa12.66□□□□□ -0.38
RXRA-201ENST00000356384 IGHV2-70P01814 119 aa12.66□□□□□ -0.38
RXRA-201ENST00000356384 PHF3Q92576 2039 aaKnown RBP12.66□□□□□ -0.38
RXRA-201ENST00000356384 ZNF503-AS2A6NEH8 195 aa12.66□□□□□ -0.38
RXRA-201ENST00000356384 LTAP01374 205 aa12.66□□□□□ -0.38
RXRA-201ENST00000356384 ZNF491Q8N8L2 437 aa12.66□□□□□ -0.38
RXRA-201ENST00000356384 PLXNA3P51805 1871 aa12.65□□□□□ -0.38
RXRA-201ENST00000356384 FUSP35637 526 aaKnown RBP eCLIP12.65□□□□□ -0.38
RXRA-201ENST00000356384 ZNF493Q6ZR52 646 aa12.65□□□□□ -0.38
RXRA-201ENST00000356384 C1orf43Q9BWL3 253 aa12.65□□□□□ -0.38
RXRA-201ENST00000356384 TEX48A0A1B0GUV7 120 aa12.65□□□□□ -0.38
RXRA-201ENST00000356384 KLF2Q9Y5W3 355 aaPredicted RBP12.65□□□□□ -0.38
RXRA-201ENST00000356384 K7EN84 100 aa12.64□□□□□ -0.39
RXRA-201ENST00000356384 IGHG2P01859 326 aa12.64□□□□□ -0.39
RXRA-201ENST00000356384 C1orf147Q96MC9 270 aaPredicted RBP12.64□□□□□ -0.39
RXRA-201ENST00000356384 PCP2Q8IVA1 136 aa12.64□□□□□ -0.39
RXRA-201ENST00000356384 AGPAT4-IT1Q9H0P7 198 aa12.64□□□□□ -0.39
RXRA-201ENST00000356384 TSC2P49815 1807 aa12.64□□□□□ -0.39
RXRA-201ENST00000356384 DOCK11Q5JSL3 2073 aa12.64□□□□□ -0.39
RXRA-201ENST00000356384 C11orf52Q96A22 123 aa12.64□□□□□ -0.39
RXRA-201ENST00000356384 TIMM17AQ99595 171 aa12.64□□□□□ -0.39
RXRA-201ENST00000356384 WNK2Q9Y3S1 2297 aa12.63□□□□□ -0.39
RXRA-201ENST00000356384 IGLV10-54A0A075B6I4 117 aa12.63□□□□□ -0.39
RXRA-201ENST00000356384 DEFB136Q30KP8 78 aa12.63□□□□□ -0.39
RXRA-201ENST00000356384 WFDC9Q8NEX5 89 aa12.63□□□□□ -0.39
RXRA-201ENST00000356384 B5MCH6 92 aa12.63□□□□□ -0.39
RXRA-201ENST00000356384 GATA1P15976 413 aaPredicted RBP12.63□□□□□ -0.39
RXRA-201ENST00000356384 CAMK2N2Q96S95 79 aa12.63□□□□□ -0.39
RXRA-201ENST00000356384 ZNF747Q9BV97 191 aa12.63□□□□□ -0.39
RXRA-201ENST00000356384 APRG1Q8IVJ8 170 aa12.62□□□□□ -0.39
RXRA-201ENST00000356384 IGHV2-5P01817 119 aa12.62□□□□□ -0.39
RXRA-201ENST00000356384 HERV-K104P63124 156 aa12.62□□□□□ -0.39
RXRA-201ENST00000356384 ZNF503Q96F45 646 aa12.62□□□□□ -0.39
RXRA-201ENST00000356384 SS18L2Q9UHA2 77 aa12.62□□□□□ -0.39
RXRA-201ENST00000356384 IGLC7A0M8Q6 106 aa12.62□□□□□ -0.39
RXRA-201ENST00000356384 WISP1O95388 367 aa12.61□□□□□ -0.39
RXRA-201ENST00000356384 TIRAPP58753 221 aa12.61□□□□□ -0.39
RXRA-201ENST00000356384 Q6ZVH6 145 aa12.61□□□□□ -0.39
RXRA-201ENST00000356384 IGHV4-59P01825 116 aa12.61□□□□□ -0.39
RXRA-201ENST00000356384 DEFB112Q30KQ8 113 aa12.61□□□□□ -0.39
RXRA-201ENST00000356384 COX7B2Q8TF08 81 aa12.61□□□□□ -0.39
RXRA-201ENST00000356384 CCL24O00175 119 aa12.61□□□□□ -0.39
RXRA-201ENST00000356384 ZFP2Q6ZN57 461 aa12.6□□□□□ -0.39
RXRA-201ENST00000356384 PROK2Q9HC23 129 aa12.6□□□□□ -0.39
RXRA-201ENST00000356384 IGHV3-30P01768 117 aa12.6□□□□□ -0.39
RXRA-201ENST00000356384 IGHV3-33P01772 117 aa12.6□□□□□ -0.39
RXRA-201ENST00000356384 IGHV3-30-3P0DP02 117 aa12.6□□□□□ -0.39
RXRA-201ENST00000356384 IGHV3-30-5P0DP03 117 aa12.6□□□□□ -0.39
RXRA-201ENST00000356384 HOXB4P17483 251 aaPredicted RBP12.6□□□□□ -0.39
RXRA-201ENST00000356384 H3BUA1 57 aa12.6□□□□□ -0.39
RXRA-201ENST00000356384 PRR20EP86478 221 aa12.6□□□□□ -0.39
RXRA-201ENST00000356384 PRR20CP86479 221 aa12.6□□□□□ -0.39
RXRA-201ENST00000356384 PRR20DP86480 221 aa12.6□□□□□ -0.39
RXRA-201ENST00000356384 PRR20BP86481 221 aa12.6□□□□□ -0.39
RXRA-201ENST00000356384 PRR20AP86496 221 aa12.6□□□□□ -0.39
RXRA-201ENST00000356384 RPL39LQ96EH5 51 aaKnown RBP12.6□□□□□ -0.39
RXRA-201ENST00000356384 HIST2H2BCQ6DN03 193 aa12.6□□□□□ -0.39
RXRA-201ENST00000356384 GYPEP15421 78 aa12.59□□□□□ -0.39
RXRA-201ENST00000356384 CACNA1HO95180 2353 aa12.59□□□□□ -0.39
RXRA-201ENST00000356384 IGKV3D-7A0A0C4DH55 119 aa12.59□□□□□ -0.39
RXRA-201ENST00000356384 C10orf91Q5T1B1 145 aa12.59□□□□□ -0.39
RXRA-201ENST00000356384 IGFBPL1Q8WX77 278 aa12.59□□□□□ -0.39
RXRA-201ENST00000356384 TANC1Q9C0D5 1861 aa12.59□□□□□ -0.39
RXRA-201ENST00000356384 PIFOQ8TCI5 191 aa12.58□□□□□ -0.39
RXRA-201ENST00000356384 NDUFB1O75438 58 aa12.58□□□□□ -0.4
RXRA-201ENST00000356384 IGFL3Q6UXB1 125 aa12.58□□□□□ -0.4
RXRA-201ENST00000356384 SH2D6Q7Z4S9 175 aa12.58□□□□□ -0.4
RXRA-201ENST00000356384 SND1-IT1Q9HBX3 110 aa12.58□□□□□ -0.4
RXRA-201ENST00000356384 VPREB3Q9UKI3 123 aa12.58□□□□□ -0.4
RXRA-201ENST00000356384 IGLV1-44P01699 117 aa12.58□□□□□ -0.4
RXRA-201ENST00000356384 WIPF2Q8TF74 440 aaPredicted RBP12.58□□□□□ -0.4
RXRA-201ENST00000356384 BAALCQ8WXS3 180 aa12.57□□□□□ -0.4
RXRA-201ENST00000356384 PRSS47A8MTI9 375 aa12.57□□□□□ -0.4
RXRA-201ENST00000356384 K7EMI3 77 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms