RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 ZNF479Q96JC4 524 aa7.29□□□□□ -1.24
CAPN3-204ENST00000356316 TXNDC17Q9BRA2 123 aa7.29□□□□□ -1.24
CAPN3-204ENST00000356316 HSPG2P98160 4391 aa7.28□□□□□ -1.24
CAPN3-204ENST00000356316 TRAV21A0A0B4J279 112 aa7.28□□□□□ -1.24
CAPN3-204ENST00000356316 K7EQD1 137 aa7.28□□□□□ -1.24
CAPN3-204ENST00000356316 SFTA3P0C7M3 94 aa7.28□□□□□ -1.24
CAPN3-204ENST00000356316 IFITM3Q01628 133 aa7.28□□□□□ -1.24
CAPN3-204ENST00000356316 PQLC2Q6ZP29 291 aa7.28□□□□□ -1.24
CAPN3-204ENST00000356316 SH2D6Q7Z4S9 175 aa7.28□□□□□ -1.24
CAPN3-204ENST00000356316 ARL6IP6Q8N6S5 226 aa7.28□□□□□ -1.24
CAPN3-204ENST00000356316 KCNS1Q96KK3 526 aa7.28□□□□□ -1.24
CAPN3-204ENST00000356316 TREM1Q9NP99 234 aa7.28□□□□□ -1.24
CAPN3-204ENST00000356316 TRAV4A0A0B4J268 109 aa7.27□□□□□ -1.25
CAPN3-204ENST00000356316 K7EQM0 130 aa7.27□□□□□ -1.25
CAPN3-204ENST00000356316 M0R2P5 195 aa7.27□□□□□ -1.25
CAPN3-204ENST00000356316 GNRH2O43555 120 aa7.27□□□□□ -1.25
CAPN3-204ENST00000356316 TDRG1Q3Y452 100 aa7.27□□□□□ -1.25
CAPN3-204ENST00000356316 CDPF1Q6NVV7 123 aa7.27□□□□□ -1.25
CAPN3-204ENST00000356316 Q6ZRN7 208 aaPredicted RBP7.27□□□□□ -1.25
CAPN3-204ENST00000356316 GOLT1AQ6ZVE7 132 aa7.27□□□□□ -1.25
CAPN3-204ENST00000356316 OR10G9Q8NGN4 311 aa7.27□□□□□ -1.25
CAPN3-204ENST00000356316 OR10G7Q8NGN6 311 aa7.27□□□□□ -1.25
CAPN3-204ENST00000356316 NDFIP1Q9BT67 221 aa7.27□□□□□ -1.25
CAPN3-204ENST00000356316 SDF2L1Q9HCN8 221 aa7.27□□□□□ -1.25
CAPN3-204ENST00000356316 TNFRSF18Q9Y5U5 241 aa7.27□□□□□ -1.25
CAPN3-204ENST00000356316 EIF3GO75821 320 aaKnown RBP eCLIP7.26□□□□□ -1.25
CAPN3-204ENST00000356316 NHLRC2Q8NBF2 726 aa7.26□□□□□ -1.25
CAPN3-204ENST00000356316 ASB13Q8WXK3 278 aa7.26□□□□□ -1.25
CAPN3-204ENST00000356316 MSRB1Q9NZV6 116 aa7.26□□□□□ -1.25
CAPN3-204ENST00000356316 IGHV3-16A0A0C4DH30 117 aa7.25□□□□□ -1.25
CAPN3-204ENST00000356316 SERTM2A0A1B0GWG4 89 aa7.25□□□□□ -1.25
CAPN3-204ENST00000356316 HMGB3O15347 200 aaKnown RBP7.25□□□□□ -1.25
CAPN3-204ENST00000356316 PPT1P50897 306 aa7.25□□□□□ -1.25
CAPN3-204ENST00000356316 WFDC10BQ8IUB3 73 aa7.25□□□□□ -1.25
CAPN3-204ENST00000356316 C10orf126Q8N4M7 172 aa7.25□□□□□ -1.25
CAPN3-204ENST00000356316 LRP1BQ9NZR2 4599 aa7.25□□□□□ -1.25
CAPN3-204ENST00000356316 A0A087WTM6 91 aa7.24□□□□□ -1.25
CAPN3-204ENST00000356316 TRAV8-1A0A0A6YYK1 113 aa7.24□□□□□ -1.25
CAPN3-204ENST00000356316 EPM2AB3EWF7 344 aa7.24□□□□□ -1.25
CAPN3-204ENST00000356316 F6UZH7 168 aa7.24□□□□□ -1.25
CAPN3-204ENST00000356316 TAAR5O14804 337 aa7.24□□□□□ -1.25
CAPN3-204ENST00000356316 PSCAO43653 123 aa7.24□□□□□ -1.25
CAPN3-204ENST00000356316 TYMSP04818 313 aa7.24□□□□□ -1.25
CAPN3-204ENST00000356316 CRYGDP07320 174 aa7.24□□□□□ -1.25
CAPN3-204ENST00000356316 PFN1P07737 140 aaKnown RBP7.24□□□□□ -1.25
CAPN3-204ENST00000356316 DNAH10OSP0CZ25 163 aa7.24□□□□□ -1.25
CAPN3-204ENST00000356316 RAB2AP61019 212 aa7.24□□□□□ -1.25
CAPN3-204ENST00000356316 ZNF876PQ49A33 203 aa7.24□□□□□ -1.25
CAPN3-204ENST00000356316 ZFP69Q49AA0 526 aa7.24□□□□□ -1.25
CAPN3-204ENST00000356316 WFDC1Q9HC57 220 aa7.24□□□□□ -1.25
CAPN3-204ENST00000356316 TRAV8-6A0A0B4J262 113 aa7.23□□□□□ -1.25
CAPN3-204ENST00000356316 LOC100996750A0A140TA64 210 aa7.23□□□□□ -1.25
CAPN3-204ENST00000356316 FBLL1A6NHQ2 334 aaKnown RBP7.23□□□□□ -1.25
CAPN3-204ENST00000356316 CIDEAO60543 219 aa7.23□□□□□ -1.25
CAPN3-204ENST00000356316 MBP02144 154 aa7.23□□□□□ -1.25
CAPN3-204ENST00000356316 ARL14EPLP0DKL9 152 aa7.23□□□□□ -1.25
CAPN3-204ENST00000356316 FUSP35637 526 aaKnown RBP eCLIP7.23□□□□□ -1.25
CAPN3-204ENST00000356316 CDC34P49427 236 aaPredicted RBP7.23□□□□□ -1.25
CAPN3-204ENST00000356316 GNG5P63218 68 aa7.23□□□□□ -1.25
CAPN3-204ENST00000356316 SGK494Q96LW2 274 aa7.23□□□□□ -1.25
CAPN3-204ENST00000356316 PRADC1Q9BSG0 188 aa7.23□□□□□ -1.25
CAPN3-204ENST00000356316 KRTAP4-6Q9BYQ5 205 aa7.23□□□□□ -1.25
CAPN3-204ENST00000356316 IGHV3-38A0A0C4DH36 116 aa7.22□□□□□ -1.25
CAPN3-204ENST00000356316 C5orf17Q8NAS9 161 aa7.22□□□□□ -1.25
CAPN3-204ENST00000356316 HSD17B11Q8NBQ5 300 aa7.22□□□□□ -1.25
CAPN3-204ENST00000356316 TVP23CQ96ET8 276 aa7.22□□□□□ -1.25
CAPN3-204ENST00000356316 LOC100131303A0A0U1RQF7 123 aa7.21□□□□□ -1.26
CAPN3-204ENST00000356316 CXorf1O96002 111 aa7.21□□□□□ -1.26
CAPN3-204ENST00000356316 GCGP01275 180 aa7.21□□□□□ -1.26
CAPN3-204ENST00000356316 TCRAP04437 139 aa7.21□□□□□ -1.26
CAPN3-204ENST00000356316 STAG3L2P0CL84 134 aa7.21□□□□□ -1.26
CAPN3-204ENST00000356316 STAG3L3P0CL85 134 aa7.21□□□□□ -1.26
CAPN3-204ENST00000356316 GATA1P15976 413 aaPredicted RBP7.21□□□□□ -1.26
CAPN3-204ENST00000356316 GCHFRP30047 84 aa7.21□□□□□ -1.26
CAPN3-204ENST00000356316 TIRAPP58753 221 aa7.21□□□□□ -1.26
CAPN3-204ENST00000356316 SUMO1P63165 101 aaKnown RBP7.21□□□□□ -1.26
CAPN3-204ENST00000356316 SERF2P84101 59 aa7.21□□□□□ -1.26
CAPN3-204ENST00000356316 SMUG1Q53HV7 270 aa7.21□□□□□ -1.26
CAPN3-204ENST00000356316 OR10J3Q5JRS4 329 aa7.21□□□□□ -1.26
CAPN3-204ENST00000356316 SAPCD1Q5SSQ6 148 aa7.21□□□□□ -1.26
CAPN3-204ENST00000356316 PRNTQ86SH4 94 aa7.21□□□□□ -1.26
CAPN3-204ENST00000356316 SLC25A29Q8N8R3 303 aa7.21□□□□□ -1.26
CAPN3-204ENST00000356316 OR2G3Q8NGZ4 309 aa7.21□□□□□ -1.26
CAPN3-204ENST00000356316 RAB24Q969Q5 203 aa7.21□□□□□ -1.26
CAPN3-204ENST00000356316 PSMG3Q9BT73 122 aaPredicted RBP7.21□□□□□ -1.26
CAPN3-204ENST00000356316 ACTR3CQ9C0K3 210 aaPredicted RBP7.21□□□□□ -1.26
CAPN3-204ENST00000356316 MED28Q9H204 178 aa7.21□□□□□ -1.26
CAPN3-204ENST00000356316 SH3BGRL3Q9H299 93 aa7.21□□□□□ -1.26
CAPN3-204ENST00000356316 TMEM167BQ9NRX6 74 aa7.21□□□□□ -1.26
CAPN3-204ENST00000356316 PSG8Q9UQ74 426 aa7.21□□□□□ -1.26
CAPN3-204ENST00000356316 ALG5Q9Y673 324 aa7.21□□□□□ -1.26
CAPN3-204ENST00000356316 DNAH5Q8TE73 4624 aa7.21□□□□□ -1.26
CAPN3-204ENST00000356316 APOBP04114 4563 aaKnown RBP7.2□□□□□ -1.26
CAPN3-204ENST00000356316 IGHV3-73A0A0B4J1V6 119 aa7.2□□□□□ -1.26
CAPN3-204ENST00000356316 TRBV6-4A0A1B0GX49 114 aa7.2□□□□□ -1.26
CAPN3-204ENST00000356316 GCSHP23434 173 aa7.2□□□□□ -1.26
CAPN3-204ENST00000356316 FLI1Q01543 452 aaPredicted RBP7.2□□□□□ -1.26
CAPN3-204ENST00000356316 RHOHQ15669 191 aa7.2□□□□□ -1.26
CAPN3-204ENST00000356316 CFAP126Q5VTH2 177 aa7.2□□□□□ -1.26
CAPN3-204ENST00000356316 INO80EQ8NBZ0 244 aaPredicted RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms