RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 CDKN1BP46527 198 aa10.09□□□□□ -0.79
HOXA1-202ENST00000355633 FOXA3P55318 350 aaPredicted RBP10.09□□□□□ -0.79
HOXA1-202ENST00000355633 AMTNQ6UX39 209 aa10.09□□□□□ -0.79
HOXA1-202ENST00000355633 PGLYRP4Q96LB8 373 aa10.09□□□□□ -0.79
HOXA1-202ENST00000355633 MCRIP2Q9BUT9 160 aaKnown RBP10.09□□□□□ -0.79
HOXA1-202ENST00000355633 IGKV3D-20A0A0C4DH25 116 aa10.08□□□□□ -0.8
HOXA1-202ENST00000355633 M0R2Z0 102 aa10.08□□□□□ -0.8
HOXA1-202ENST00000355633 TCAPO15273 167 aa10.08□□□□□ -0.8
HOXA1-202ENST00000355633 CD7P09564 240 aa10.08□□□□□ -0.8
HOXA1-202ENST00000355633 COTL1Q14019 142 aa10.08□□□□□ -0.8
HOXA1-202ENST00000355633 SPINK13Q1W4C9 94 aa10.08□□□□□ -0.8
HOXA1-202ENST00000355633 MRPL54Q6P161 138 aaKnown RBP10.08□□□□□ -0.8
HOXA1-202ENST00000355633 ATRQ13535 2644 aa10.08□□□□□ -0.8
HOXA1-202ENST00000355633 WFDC9Q8NEX5 89 aa10.07□□□□□ -0.8
HOXA1-202ENST00000355633 FAM110AQ9BQ89 295 aa10.07□□□□□ -0.8
HOXA1-202ENST00000355633 NAGKQ9UJ70 344 aa10.07□□□□□ -0.8
HOXA1-202ENST00000355633 C7orf71A4D174 169 aa10.07□□□□□ -0.8
HOXA1-202ENST00000355633 TRGC2P03986 189 aa10.07□□□□□ -0.8
HOXA1-202ENST00000355633 GFI1BQ5VTD9 330 aa10.07□□□□□ -0.8
HOXA1-202ENST00000355633 STHQ8IWL8 128 aa10.07□□□□□ -0.8
HOXA1-202ENST00000355633 SVIPQ8NHG7 77 aa10.07□□□□□ -0.8
HOXA1-202ENST00000355633 TPPP3Q9BW30 176 aa10.07□□□□□ -0.8
HOXA1-202ENST00000355633 TRAV12-2A0A075B6T6 113 aa10.06□□□□□ -0.8
HOXA1-202ENST00000355633 TRAV12-3A0A0B4J271 114 aa10.06□□□□□ -0.8
HOXA1-202ENST00000355633 GRIFINA4D1Z8 144 aa10.06□□□□□ -0.8
HOXA1-202ENST00000355633 RBMY1BA6NDE4 496 aaKnown RBP10.06□□□□□ -0.8
HOXA1-202ENST00000355633 RBMY1EA6NEQ0 496 aaKnown RBP10.06□□□□□ -0.8
HOXA1-202ENST00000355633 RBMY1DP0C7P1 496 aaKnown RBP10.06□□□□□ -0.8
HOXA1-202ENST00000355633 FRMD6-AS1P0C7T7 363 aa10.06□□□□□ -0.8
HOXA1-202ENST00000355633 ATP5L2Q7Z4Y8 100 aa10.06□□□□□ -0.8
HOXA1-202ENST00000355633 ZNF575Q86XF7 245 aa10.06□□□□□ -0.8
HOXA1-202ENST00000355633 TENM1Q9UKZ4 2725 aa10.06□□□□□ -0.8
HOXA1-202ENST00000355633 FXYD7P58549 80 aa10.06□□□□□ -0.8
HOXA1-202ENST00000355633 COX19Q49B96 90 aa10.06□□□□□ -0.8
HOXA1-202ENST00000355633 MUC21Q5SSG8 566 aa10.06□□□□□ -0.8
HOXA1-202ENST00000355633 RASL11AQ6T310 242 aa10.06□□□□□ -0.8
HOXA1-202ENST00000355633 FER1L6-AS1Q8NA97 138 aa10.06□□□□□ -0.8
HOXA1-202ENST00000355633 CLUHP3Q96NS8 147 aa10.06□□□□□ -0.8
HOXA1-202ENST00000355633 IGLC6P0CF74 106 aa10.05□□□□□ -0.8
HOXA1-202ENST00000355633 ANXA2RQ3ZCQ2 193 aa10.05□□□□□ -0.8
HOXA1-202ENST00000355633 WDR73Q6P4I2 378 aa10.05□□□□□ -0.8
HOXA1-202ENST00000355633 LYZL1Q6UWQ5 148 aa10.05□□□□□ -0.8
HOXA1-202ENST00000355633 BORCS7Q96B45 105 aa10.05□□□□□ -0.8
HOXA1-202ENST00000355633 C19orf73Q9NVV2 129 aa10.05□□□□□ -0.8
HOXA1-202ENST00000355633 TRAPPC1Q9Y5R8 145 aa10.05□□□□□ -0.8
HOXA1-202ENST00000355633 SNURFLB1AK76 121 aa10.04□□□□□ -0.8
HOXA1-202ENST00000355633 ZNF324O75467 553 aaPredicted RBP10.04□□□□□ -0.8
HOXA1-202ENST00000355633 ARMS2P0C7Q2 107 aa10.04□□□□□ -0.8
HOXA1-202ENST00000355633 IGLL1P15814 213 aa10.04□□□□□ -0.8
HOXA1-202ENST00000355633 GNB1LQ9BYB4 327 aa10.04□□□□□ -0.8
HOXA1-202ENST00000355633 FBN1P35555 2871 aaKnown RBP10.04□□□□□ -0.8
HOXA1-202ENST00000355633 A0A1B0GUT8 65 aa10.04□□□□□ -0.8
HOXA1-202ENST00000355633 A0A1B0GXF2 115 aa10.04□□□□□ -0.8
HOXA1-202ENST00000355633 TSTD3H0UI37 97 aa10.04□□□□□ -0.8
HOXA1-202ENST00000355633 PKIAP61925 76 aa10.04□□□□□ -0.8
HOXA1-202ENST00000355633 HBBP68871 147 aa10.04□□□□□ -0.8
HOXA1-202ENST00000355633 FAM159AQ6UWV7 190 aa10.04□□□□□ -0.8
HOXA1-202ENST00000355633 TRPT1Q86TN4 253 aaKnown RBP10.04□□□□□ -0.8
HOXA1-202ENST00000355633 WFDC10AQ9H1F0 79 aa10.04□□□□□ -0.8
HOXA1-202ENST00000355633 MT-ND6P03923 174 aa10.03□□□□□ -0.8
HOXA1-202ENST00000355633 CTRLP40313 264 aa10.03□□□□□ -0.8
HOXA1-202ENST00000355633 CAMPP49913 170 aa10.03□□□□□ -0.8
HOXA1-202ENST00000355633 RIGQ13278 110 aa10.03□□□□□ -0.8
HOXA1-202ENST00000355633 TMEM136Q6ZRR5 245 aa10.03□□□□□ -0.8
HOXA1-202ENST00000355633 GTSCR1Q86UQ5 136 aa10.03□□□□□ -0.8
HOXA1-202ENST00000355633 FRZBQ92765 325 aa10.03□□□□□ -0.8
HOXA1-202ENST00000355633 CRXO43186 299 aaPredicted RBP10.02□□□□□ -0.8
HOXA1-202ENST00000355633 DDTP30046 118 aa10.02□□□□□ -0.8
HOXA1-202ENST00000355633 KCNS1Q96KK3 526 aa10.02□□□□□ -0.8
HOXA1-202ENST00000355633 F2Z2F3 143 aa10.02□□□□□ -0.81
HOXA1-202ENST00000355633 PHOX2AO14813 284 aa10.02□□□□□ -0.81
HOXA1-202ENST00000355633 HLA-DQA1P01909 254 aa10.02□□□□□ -0.81
HOXA1-202ENST00000355633 S100A2P29034 98 aa10.02□□□□□ -0.81
HOXA1-202ENST00000355633 MRPL18Q9H0U6 180 aaKnown RBP10.02□□□□□ -0.81
HOXA1-202ENST00000355633 AMBPP02760 352 aa10.01□□□□□ -0.81
HOXA1-202ENST00000355633 S100A4P26447 101 aaKnown RBP10.01□□□□□ -0.81
HOXA1-202ENST00000355633 ASIPP42127 132 aa10.01□□□□□ -0.81
HOXA1-202ENST00000355633 NUTF2P61970 127 aaKnown RBP10.01□□□□□ -0.81
HOXA1-202ENST00000355633 MUC21A0A0G2JKD1 596 aa10□□□□□ -0.81
HOXA1-202ENST00000355633 MUC21A0A140T8X8 626 aa10□□□□□ -0.81
HOXA1-202ENST00000355633 A0A1B0GW15 77 aa10□□□□□ -0.81
HOXA1-202ENST00000355633 H3BVH4 76 aa10□□□□□ -0.81
HOXA1-202ENST00000355633 WIPF1O43516 503 aa10□□□□□ -0.81
HOXA1-202ENST00000355633 GNRH2O43555 120 aa10□□□□□ -0.81
HOXA1-202ENST00000355633 TDRG1Q3Y452 100 aa10□□□□□ -0.81
HOXA1-202ENST00000355633 IGHV1OR15-1A0A075B7D0 117 aa10□□□□□ -0.81
HOXA1-202ENST00000355633 SNAI2O43623 268 aa10□□□□□ -0.81
HOXA1-202ENST00000355633 OR5AL1P0C617 328 aa10□□□□□ -0.81
HOXA1-202ENST00000355633 TRGC1P0CF51 173 aa10□□□□□ -0.81
HOXA1-202ENST00000355633 RBMY1A1P0DJD3 496 aaKnown RBP10□□□□□ -0.81
HOXA1-202ENST00000355633 RBMY1CP0DJD4 496 aa10□□□□□ -0.81
HOXA1-202ENST00000355633 RBMY1FQ15415 496 aaKnown RBP10□□□□□ -0.81
HOXA1-202ENST00000355633 SSBP4Q9BWG4 385 aaPredicted RBP10□□□□□ -0.81
HOXA1-202ENST00000355633 CNFNQ9BYD5 112 aa10□□□□□ -0.81
HOXA1-202ENST00000355633 INSP01308 110 aa9.99□□□□□ -0.81
HOXA1-202ENST00000355633 NTF3P20783 257 aa9.99□□□□□ -0.81
HOXA1-202ENST00000355633 DEFB125Q8N687 156 aa9.99□□□□□ -0.81
HOXA1-202ENST00000355633 XCL2Q9UBD3 114 aa9.99□□□□□ -0.81
HOXA1-202ENST00000355633 TIMM8BQ9Y5J9 83 aaPredicted RBP9.99□□□□□ -0.81
HOXA1-202ENST00000355633 HIST1H2BKO60814 126 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms