RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 SCRT2Q9NQ03 307 aa4.11□□□□□ -1.75
CD47-201ENST00000355354 ZFP30Q9Y2G7 519 aa4.11□□□□□ -1.75
CD47-201ENST00000355354 GAGE12BA1L429 117 aa4.11□□□□□ -1.75
CD47-201ENST00000355354 BRI3O95415 125 aa4.11□□□□□ -1.75
CD47-201ENST00000355354 Q0VG73 95 aa4.11□□□□□ -1.75
CD47-201ENST00000355354 OR8A1Q8NGG7 326 aa4.11□□□□□ -1.75
CD47-201ENST00000355354 KLK5Q9Y337 293 aaPredicted RBP4.11□□□□□ -1.75
CD47-201ENST00000355354 WASHC3Q9Y3C0 194 aa4.11□□□□□ -1.75
CD47-201ENST00000355354 A0A087WWL8 130 aa4.11□□□□□ -1.75
CD47-201ENST00000355354 DUXBA0A1W2PPF3 345 aa4.11□□□□□ -1.75
CD47-201ENST00000355354 CRXO43186 299 aaPredicted RBP4.11□□□□□ -1.75
CD47-201ENST00000355354 NHLRC4P0CG21 123 aaPredicted RBP4.11□□□□□ -1.75
CD47-201ENST00000355354 BUB1B-PAK6H3BSN5 160 aa4.1□□□□□ -1.75
CD47-201ENST00000355354 POU2AF1Q16633 256 aa4.1□□□□□ -1.75
CD47-201ENST00000355354 ZFAND2AQ8N6M9 145 aa4.1□□□□□ -1.75
CD47-201ENST00000355354 RBM14Q96PK6 669 aaKnown RBP4.1□□□□□ -1.75
CD47-201ENST00000355354 CTDSP1Q9GZU7 261 aa4.1□□□□□ -1.75
CD47-201ENST00000355354 TRBV19A0A075B6N1 114 aa4.1□□□□□ -1.75
CD47-201ENST00000355354 A0A0U1RRA0 63 aa4.1□□□□□ -1.75
CD47-201ENST00000355354 DUSP14O95147 198 aaKnown RBP4.1□□□□□ -1.75
CD47-201ENST00000355354 C8orf88P0DMB2 117 aa4.1□□□□□ -1.75
CD47-201ENST00000355354 ODF1Q14990 250 aa4.1□□□□□ -1.75
CD47-201ENST00000355354 GATCO43716 136 aaKnown RBP4.1□□□□□ -1.75
CD47-201ENST00000355354 GNG4P50150 75 aa4.1□□□□□ -1.75
CD47-201ENST00000355354 C1orf122Q6ZSJ8 110 aa4.1□□□□□ -1.75
CD47-201ENST00000355354 KCNIP1Q9NZI2 227 aa4.1□□□□□ -1.75
CD47-201ENST00000355354 H3BUT2 72 aa4.1□□□□□ -1.75
CD47-201ENST00000355354 RS1O15537 224 aa4.1□□□□□ -1.75
CD47-201ENST00000355354 LY6EQ16553 131 aa4.1□□□□□ -1.75
CD47-201ENST00000355354 Q86TA4 180 aa4.1□□□□□ -1.75
CD47-201ENST00000355354 ZNF738Q8NE65 137 aa4.1□□□□□ -1.75
CD47-201ENST00000355354 MEGF9Q9H1U4 602 aa4.1□□□□□ -1.75
CD47-201ENST00000355354 LIN7CQ9NUP9 197 aaKnown RBP4.1□□□□□ -1.75
CD47-201ENST00000355354 RNF212BA8MTL3 300 aa4.09□□□□□ -1.75
CD47-201ENST00000355354 HLA-DRB4P13762 266 aa4.09□□□□□ -1.75
CD47-201ENST00000355354 AZU1P20160 251 aa4.09□□□□□ -1.75
CD47-201ENST00000355354 RAB5CP51148 216 aa4.09□□□□□ -1.75
CD47-201ENST00000355354 RTL8AQ9BWD3 113 aa4.09□□□□□ -1.75
CD47-201ENST00000355354 THYN1Q9P016 225 aa4.09□□□□□ -1.75
CD47-201ENST00000355354 HLA-DRB4X5D2U9 266 aa4.09□□□□□ -1.75
CD47-201ENST00000355354 TRBV25-1A0A075B6N4 114 aa4.09□□□□□ -1.75
CD47-201ENST00000355354 BUB3O43684 328 aa4.09□□□□□ -1.75
CD47-201ENST00000355354 IFNA5P01569 189 aa4.09□□□□□ -1.75
CD47-201ENST00000355354 SPIN2AQ99865 258 aa4.09□□□□□ -1.75
CD47-201ENST00000355354 SPIN2BQ9BPZ2 258 aa4.09□□□□□ -1.75
CD47-201ENST00000355354 TCRBV4S1A1TA0A5B7 111 aa4.09□□□□□ -1.76
CD47-201ENST00000355354 TOMM40O96008 361 aa4.09□□□□□ -1.76
CD47-201ENST00000355354 RBP4P02753 201 aa4.09□□□□□ -1.76
CD47-201ENST00000355354 LINC00614P0C842 121 aa4.09□□□□□ -1.76
CD47-201ENST00000355354 LINC00694P0DN24 101 aa4.09□□□□□ -1.76
CD47-201ENST00000355354 NPC2P61916 151 aa4.09□□□□□ -1.76
CD47-201ENST00000355354 PSG3Q16557 428 aa4.09□□□□□ -1.76
CD47-201ENST00000355354 PVRIGQ6DKI7 326 aa4.09□□□□□ -1.76
CD47-201ENST00000355354 SAA4P35542 130 aa4.08□□□□□ -1.76
CD47-201ENST00000355354 C15orf32Q32M92 178 aa4.08□□□□□ -1.76
CD47-201ENST00000355354 VMO1Q7Z5L0 202 aa4.08□□□□□ -1.76
CD47-201ENST00000355354 SPAG8Q99932 426 aaPredicted RBP4.08□□□□□ -1.76
CD47-201ENST00000355354 ENY2Q9NPA8 101 aa4.08□□□□□ -1.76
CD47-201ENST00000355354 A8MTW9 85 aa4.08□□□□□ -1.76
CD47-201ENST00000355354 M0R2N4 97 aa4.08□□□□□ -1.76
CD47-201ENST00000355354 APOBEC3AP31941 199 aaPredicted RBP4.08□□□□□ -1.76
CD47-201ENST00000355354 DEFB125Q8N687 156 aa4.08□□□□□ -1.76
CD47-201ENST00000355354 PRR25Q96S07 402 aa4.08□□□□□ -1.76
CD47-201ENST00000355354 USH2AO75445 5202 aa4.08□□□□□ -1.76
CD47-201ENST00000355354 PRSS1P07477 247 aa4.08□□□□□ -1.76
CD47-201ENST00000355354 OR4A16Q8NH70 328 aa4.08□□□□□ -1.76
CD47-201ENST00000355354 LINC00526Q96FQ7 95 aa4.08□□□□□ -1.76
CD47-201ENST00000355354 IGLV11-55A0A075B6I3 123 aa4.07□□□□□ -1.76
CD47-201ENST00000355354 FAM90A10PA6NDY2 464 aa4.07□□□□□ -1.76
CD47-201ENST00000355354 FAM90A7PA6NKC0 464 aa4.07□□□□□ -1.76
CD47-201ENST00000355354 FAM90A22PA8MWA6 464 aa4.07□□□□□ -1.76
CD47-201ENST00000355354 FAM90A12PA8MX19 464 aa4.07□□□□□ -1.76
CD47-201ENST00000355354 FAM90A14PP0C7W9 464 aa4.07□□□□□ -1.76
CD47-201ENST00000355354 BPIFB3P59826 476 aa4.07□□□□□ -1.76
CD47-201ENST00000355354 HBG1P69891 147 aa4.07□□□□□ -1.76
CD47-201ENST00000355354 HBG2P69892 147 aa4.07□□□□□ -1.76
CD47-201ENST00000355354 C2orf83Q53S99 150 aa4.07□□□□□ -1.76
CD47-201ENST00000355354 GATD1Q8NB37 220 aa4.07□□□□□ -1.76
CD47-201ENST00000355354 KIF25-AS1Q9Y6Z4 181 aa4.07□□□□□ -1.76
CD47-201ENST00000355354 M0R143 59 aa4.07□□□□□ -1.76
CD47-201ENST00000355354 HTN1P15515 57 aa4.07□□□□□ -1.76
CD47-201ENST00000355354 BEAN1Q3B7T3 259 aa4.07□□□□□ -1.76
CD47-201ENST00000355354 LY6G5BQ8NDX9 201 aa4.07□□□□□ -1.76
CD47-201ENST00000355354 PRNDQ9UKY0 176 aa4.07□□□□□ -1.76
CD47-201ENST00000355354 CYSLTR1Q9Y271 337 aa4.07□□□□□ -1.76
CD47-201ENST00000355354 MBP02144 154 aa4.07□□□□□ -1.76
CD47-201ENST00000355354 RPS20P60866 119 aaKnown RBP4.07□□□□□ -1.76
CD47-201ENST00000355354 TMEM167AQ8TBQ9 72 aa4.07□□□□□ -1.76
CD47-201ENST00000355354 CDIP1Q9H305 208 aa4.07□□□□□ -1.76
CD47-201ENST00000355354 C16orf95Q9H693 158 aa4.07□□□□□ -1.76
CD47-201ENST00000355354 A0A1B0GV72 72 aa4.07□□□□□ -1.76
CD47-201ENST00000355354 HSBP1O75506 76 aa4.07□□□□□ -1.76
CD47-201ENST00000355354 SLC25A5P05141 298 aaKnown RBP4.07□□□□□ -1.76
CD47-201ENST00000355354 IGLC6P0CF74 106 aa4.07□□□□□ -1.76
CD47-201ENST00000355354 PRR3P79522 188 aaKnown RBP4.07□□□□□ -1.76
CD47-201ENST00000355354 UBE2V1Q13404 147 aa4.07□□□□□ -1.76
CD47-201ENST00000355354 TMEM158Q8WZ71 300 aa4.07□□□□□ -1.76
CD47-201ENST00000355354 GPR82Q96P67 336 aa4.07□□□□□ -1.76
CD47-201ENST00000355354 KCNIP2Q9NS61 270 aa4.07□□□□□ -1.76
CD47-201ENST00000355354 RBAKDNA6NC62 111 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms