RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 POU2AF1Q16633 256 aa10.37□□□□□ -0.75
SCN8A-202ENST00000355133 LGALS9BQ3B8N2 356 aa10.37□□□□□ -0.75
SCN8A-202ENST00000355133 LGALS9CQ6DKI2 356 aa10.37□□□□□ -0.75
SCN8A-202ENST00000355133 PYGO2Q9BRQ0 406 aa10.37□□□□□ -0.75
SCN8A-202ENST00000355133 NDUFS6O75380 124 aaKnown RBP10.36□□□□□ -0.75
SCN8A-202ENST00000355133 UBE2BP63146 152 aa10.36□□□□□ -0.75
SCN8A-202ENST00000355133 C8orf31Q8N9H6 132 aa10.36□□□□□ -0.75
SCN8A-202ENST00000355133 RITA1Q96K30 269 aa10.36□□□□□ -0.75
SCN8A-202ENST00000355133 BLCAPP62952 87 aa10.36□□□□□ -0.75
SCN8A-202ENST00000355133 OR11H6Q8NGC7 330 aa10.36□□□□□ -0.75
SCN8A-202ENST00000355133 J3QQQ9 107 aa10.36□□□□□ -0.75
SCN8A-202ENST00000355133 K7EN84 100 aa10.36□□□□□ -0.75
SCN8A-202ENST00000355133 INAFM2P0DMQ5 153 aa10.36□□□□□ -0.75
SCN8A-202ENST00000355133 C20orf78Q9BR46 151 aa10.36□□□□□ -0.75
SCN8A-202ENST00000355133 F8VRH5 84 aa10.36□□□□□ -0.75
SCN8A-202ENST00000355133 DKK2Q9UBU2 259 aa10.36□□□□□ -0.75
SCN8A-202ENST00000355133 MRPL52Q86TS9 123 aaKnown RBP10.35□□□□□ -0.75
SCN8A-202ENST00000355133 C20orf144Q9BQM9 153 aa10.35□□□□□ -0.75
SCN8A-202ENST00000355133 PIFOQ8TCI5 191 aa10.35□□□□□ -0.75
SCN8A-202ENST00000355133 IGLL1P15814 213 aa10.35□□□□□ -0.75
SCN8A-202ENST00000355133 C11orf52Q96A22 123 aa10.35□□□□□ -0.75
SCN8A-202ENST00000355133 FGF23Q9GZV9 251 aaPredicted RBP10.35□□□□□ -0.75
SCN8A-202ENST00000355133 CACNA1HO95180 2353 aa10.35□□□□□ -0.75
SCN8A-202ENST00000355133 GP9P14770 177 aa10.34□□□□□ -0.75
SCN8A-202ENST00000355133 SRSF2Q01130 221 aaKnown RBP10.34□□□□□ -0.75
SCN8A-202ENST00000355133 NOTCH3Q9UM47 2321 aa10.34□□□□□ -0.75
SCN8A-202ENST00000355133 IGHV7-81A0A0B4J1V7 117 aa10.34□□□□□ -0.75
SCN8A-202ENST00000355133 C9orf66Q5T8R8 295 aa10.34□□□□□ -0.75
SCN8A-202ENST00000355133 AJUBAQ96IF1 538 aa10.34□□□□□ -0.75
SCN8A-202ENST00000355133 DKK4Q9UBT3 224 aa10.34□□□□□ -0.75
SCN8A-202ENST00000355133 COX8AP10176 69 aa10.34□□□□□ -0.75
SCN8A-202ENST00000355133 TRBV20-1A0A075B6N2 111 aa10.34□□□□□ -0.75
SCN8A-202ENST00000355133 TRAV12-1A0A0B4J245 112 aa10.34□□□□□ -0.75
SCN8A-202ENST00000355133 C9orf118A6NHY6 69 aa10.34□□□□□ -0.75
SCN8A-202ENST00000355133 IGFL2Q6UWQ7 119 aa10.34□□□□□ -0.75
SCN8A-202ENST00000355133 DOCK9Q9BZ29 2069 aa10.34□□□□□ -0.75
SCN8A-202ENST00000355133 TSC2P49815 1807 aa10.34□□□□□ -0.75
SCN8A-202ENST00000355133 CRYGCP07315 174 aa10.34□□□□□ -0.75
SCN8A-202ENST00000355133 UBL5Q9BZL1 73 aa10.34□□□□□ -0.75
SCN8A-202ENST00000355133 FRMPD3Q5JV73 1810 aa10.33□□□□□ -0.76
SCN8A-202ENST00000355133 TRAV13-2A0A0B4J235 113 aa10.33□□□□□ -0.76
SCN8A-202ENST00000355133 K7ERJ3 54 aa10.33□□□□□ -0.76
SCN8A-202ENST00000355133 IGLC2P0DOY2 106 aa10.33□□□□□ -0.76
SCN8A-202ENST00000355133 IGLC3P0DOY3 106 aa10.33□□□□□ -0.76
SCN8A-202ENST00000355133 DSCR8Q96T75 97 aa10.33□□□□□ -0.76
SCN8A-202ENST00000355133 TINCRA0A1B0GVN0 87 aa10.33□□□□□ -0.76
SCN8A-202ENST00000355133 DEFB105AQ8NG35 78 aa10.33□□□□□ -0.76
SCN8A-202ENST00000355133 PRO1854Q9UHT4 67 aa10.33□□□□□ -0.76
SCN8A-202ENST00000355133 HEATR5AQ86XA9 2040 aa10.33□□□□□ -0.76
SCN8A-202ENST00000355133 MYLKQ15746 1914 aa10.33□□□□□ -0.76
SCN8A-202ENST00000355133 GATA1P15976 413 aaPredicted RBP10.33□□□□□ -0.76
SCN8A-202ENST00000355133 CEND1Q8N111 149 aa10.33□□□□□ -0.76
SCN8A-202ENST00000355133 ADORA2A-AS1P86434 159 aa10.33□□□□□ -0.76
SCN8A-202ENST00000355133 ESM1Q9NQ30 184 aa10.32□□□□□ -0.76
SCN8A-202ENST00000355133 C5orf38Q86SI9 138 aa10.32□□□□□ -0.76
SCN8A-202ENST00000355133 NPBQ8NG41 125 aa10.32□□□□□ -0.76
SCN8A-202ENST00000355133 CARD19Q96LW7 228 aa10.32□□□□□ -0.76
SCN8A-202ENST00000355133 RPL18AQ02543 176 aaKnown RBP10.31□□□□□ -0.76
SCN8A-202ENST00000355133 RBAKDNA6NC62 111 aa10.31□□□□□ -0.76
SCN8A-202ENST00000355133 GYPEP15421 78 aa10.31□□□□□ -0.76
SCN8A-202ENST00000355133 IGLV10-54A0A075B6I4 117 aa10.31□□□□□ -0.76
SCN8A-202ENST00000355133 IGHV4-4A0A075B6R2 117 aa10.31□□□□□ -0.76
SCN8A-202ENST00000355133 PLXNA2O75051 1894 aa10.31□□□□□ -0.76
SCN8A-202ENST00000355133 Q9H8V8 135 aa10.31□□□□□ -0.76
SCN8A-202ENST00000355133 IGHV3-30P01768 117 aa10.31□□□□□ -0.76
SCN8A-202ENST00000355133 IGHV3-33P01772 117 aa10.31□□□□□ -0.76
SCN8A-202ENST00000355133 IGHV3-30-3P0DP02 117 aa10.31□□□□□ -0.76
SCN8A-202ENST00000355133 IGHV3-30-5P0DP03 117 aa10.31□□□□□ -0.76
SCN8A-202ENST00000355133 BVES-AS1Q5T3Y7 98 aa10.31□□□□□ -0.76
SCN8A-202ENST00000355133 ZNF493Q6ZR52 646 aa10.31□□□□□ -0.76
SCN8A-202ENST00000355133 BOD1L2Q8IYS8 172 aa10.31□□□□□ -0.76
SCN8A-202ENST00000355133 C10orf105Q8TEF2 133 aa10.31□□□□□ -0.76
SCN8A-202ENST00000355133 C1orf43Q9BWL3 253 aa10.31□□□□□ -0.76
SCN8A-202ENST00000355133 I3L2K1 104 aa10.3□□□□□ -0.76
SCN8A-202ENST00000355133 MAJINQ3KP22 176 aa10.3□□□□□ -0.76
SCN8A-202ENST00000355133 NLRC5Q86WI3 1866 aa10.3□□□□□ -0.76
SCN8A-202ENST00000355133 DOCK11Q5JSL3 2073 aa10.3□□□□□ -0.76
SCN8A-202ENST00000355133 hADV29S1A0JD25 119 aa10.3□□□□□ -0.76
SCN8A-202ENST00000355133 RPL39LQ96EH5 51 aaKnown RBP10.3□□□□□ -0.76
SCN8A-202ENST00000355133 PCNX1Q96RV3 2341 aa10.3□□□□□ -0.76
SCN8A-202ENST00000355133 ETDBQ3ZM63 59 aa10.3□□□□□ -0.76
SCN8A-202ENST00000355133 IGHV4OR15-8A0A075B7B6 117 aa10.29□□□□□ -0.76
SCN8A-202ENST00000355133 A0A087WW49 117 aa10.29□□□□□ -0.76
SCN8A-202ENST00000355133 K7EIM0 57 aa10.29□□□□□ -0.76
SCN8A-202ENST00000355133 BUB3O43684 328 aa10.29□□□□□ -0.76
SCN8A-202ENST00000355133 IGHG4P01861 327 aa10.29□□□□□ -0.76
SCN8A-202ENST00000355133 Q8NFD4 153 aa10.29□□□□□ -0.76
SCN8A-202ENST00000355133 C9orf153Q5TBE3 101 aa10.29□□□□□ -0.76
SCN8A-202ENST00000355133 PPDPFLQ8WWR9 84 aa10.29□□□□□ -0.76
SCN8A-202ENST00000355133 C16orf74Q96GX8 76 aa10.29□□□□□ -0.76
SCN8A-202ENST00000355133 PLXND1Q9Y4D7 1925 aa10.29□□□□□ -0.76
SCN8A-202ENST00000355133 IGLV11-55A0A075B6I3 123 aa10.28□□□□□ -0.76
SCN8A-202ENST00000355133 SLC25A29Q8N8R3 303 aa10.28□□□□□ -0.76
SCN8A-202ENST00000355133 KLF2Q9Y5W3 355 aaPredicted RBP10.28□□□□□ -0.76
SCN8A-202ENST00000355133 ICOSQ9Y6W8 199 aa10.28□□□□□ -0.76
SCN8A-202ENST00000355133 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.28□□□□□ -0.76
SCN8A-202ENST00000355133 K7EQD1 137 aa10.28□□□□□ -0.76
SCN8A-202ENST00000355133 NDUFS5O43920 106 aa10.28□□□□□ -0.76
SCN8A-202ENST00000355133 WIPF2Q8TF74 440 aaPredicted RBP10.28□□□□□ -0.76
SCN8A-202ENST00000355133 CTSGP08311 255 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms