RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 MST1P26927 711 aa4.6□□□□□ -1.67
SRGAP1-201ENST00000355086 PROP1O75360 226 aa4.6□□□□□ -1.67
SRGAP1-201ENST00000355086 IGHV7-4-1A0A0J9YVY3 117 aa4.6□□□□□ -1.67
SRGAP1-201ENST00000355086 C5orf38Q86SI9 138 aa4.6□□□□□ -1.67
SRGAP1-201ENST00000355086 PRR25Q96S07 402 aa4.6□□□□□ -1.67
SRGAP1-201ENST00000355086 A0A1W2PPM0 123 aa4.6□□□□□ -1.67
SRGAP1-201ENST00000355086 CSRP3P50461 194 aa4.6□□□□□ -1.67
SRGAP1-201ENST00000355086 NDUFC2O95298 119 aa4.6□□□□□ -1.67
SRGAP1-201ENST00000355086 C9orf66Q5T8R8 295 aa4.6□□□□□ -1.67
SRGAP1-201ENST00000355086 ZNF581Q9P0T4 197 aa4.6□□□□□ -1.67
SRGAP1-201ENST00000355086 K7EP13 123 aa4.6□□□□□ -1.67
SRGAP1-201ENST00000355086 TRAV4A0A0B4J268 109 aa4.6□□□□□ -1.67
SRGAP1-201ENST00000355086 FOXI2Q6ZQN5 318 aa4.6□□□□□ -1.67
SRGAP1-201ENST00000355086 VSIG2Q96IQ7 327 aa4.6□□□□□ -1.67
SRGAP1-201ENST00000355086 A0A0G2JRQ6 117 aa4.6□□□□□ -1.67
SRGAP1-201ENST00000355086 CYYR1Q96J86 154 aa4.6□□□□□ -1.67
SRGAP1-201ENST00000355086 COX7A2LO14548 114 aa4.6□□□□□ -1.67
SRGAP1-201ENST00000355086 COL18A1P39060 1754 aa4.6□□□□□ -1.67
SRGAP1-201ENST00000355086 GAGE12HA6NDE8 117 aa4.6□□□□□ -1.67
SRGAP1-201ENST00000355086 K7EP34 96 aa4.6□□□□□ -1.67
SRGAP1-201ENST00000355086 GYPEP15421 78 aa4.6□□□□□ -1.67
SRGAP1-201ENST00000355086 VOPP1Q96AW1 172 aa4.6□□□□□ -1.67
SRGAP1-201ENST00000355086 NREPQ16612 68 aa4.6□□□□□ -1.67
SRGAP1-201ENST00000355086 Q6ZRM9 215 aa4.6□□□□□ -1.67
SRGAP1-201ENST00000355086 H3BRN7 92 aa4.59□□□□□ -1.67
SRGAP1-201ENST00000355086 C9orf47Q6ZRZ4 202 aa4.59□□□□□ -1.67
SRGAP1-201ENST00000355086 IGLC2P0DOY2 106 aa4.59□□□□□ -1.67
SRGAP1-201ENST00000355086 IGLC3P0DOY3 106 aa4.59□□□□□ -1.67
SRGAP1-201ENST00000355086 PRR30Q53SZ7 412 aaPredicted RBP4.59□□□□□ -1.67
SRGAP1-201ENST00000355086 KLHDC3Q9BQ90 382 aa4.59□□□□□ -1.67
SRGAP1-201ENST00000355086 REG4Q9BYZ8 158 aa4.59□□□□□ -1.67
SRGAP1-201ENST00000355086 DAZ2Q13117 558 aaKnown RBP4.59□□□□□ -1.67
SRGAP1-201ENST00000355086 DAZ4Q86SG3 579 aaKnown RBP4.59□□□□□ -1.67
SRGAP1-201ENST00000355086 DYNAPQ8N1N2 210 aa4.59□□□□□ -1.67
SRGAP1-201ENST00000355086 PYGO2Q9BRQ0 406 aa4.59□□□□□ -1.67
SRGAP1-201ENST00000355086 DAZ3Q9NR90 486 aaKnown RBP4.59□□□□□ -1.67
SRGAP1-201ENST00000355086 LYL1P12980 280 aa4.59□□□□□ -1.67
SRGAP1-201ENST00000355086 ETV2O00321 342 aaPredicted RBP4.59□□□□□ -1.67
SRGAP1-201ENST00000355086 Q8TCH9 128 aa4.59□□□□□ -1.67
SRGAP1-201ENST00000355086 HIST2H2BCQ6DN03 193 aa4.59□□□□□ -1.67
SRGAP1-201ENST00000355086 TNRC6AQ8NDV7 1962 aaKnown RBP4.59□□□□□ -1.67
SRGAP1-201ENST00000355086 NCOA6Q14686 2063 aaPredicted RBP4.59□□□□□ -1.67
SRGAP1-201ENST00000355086 SMIM27A0A1W2PRY6 76 aa4.59□□□□□ -1.67
SRGAP1-201ENST00000355086 IGHV3-30P01768 117 aa4.59□□□□□ -1.67
SRGAP1-201ENST00000355086 IGHV3-33P01772 117 aa4.59□□□□□ -1.67
SRGAP1-201ENST00000355086 IGHV3-30-3P0DP02 117 aa4.59□□□□□ -1.67
SRGAP1-201ENST00000355086 IGHV3-30-5P0DP03 117 aa4.59□□□□□ -1.67
SRGAP1-201ENST00000355086 C20orf78Q9BR46 151 aa4.59□□□□□ -1.68
SRGAP1-201ENST00000355086 SIPA1L3O60292 1781 aaPredicted RBP4.59□□□□□ -1.68
SRGAP1-201ENST00000355086 SPART-AS1P0CW21 52 aa4.59□□□□□ -1.68
SRGAP1-201ENST00000355086 ACACBO00763 2458 aa4.59□□□□□ -1.68
SRGAP1-201ENST00000355086 MRPL23Q16540 153 aaKnown RBP4.59□□□□□ -1.68
SRGAP1-201ENST00000355086 WNK3Q9BYP7 1800 aa4.58□□□□□ -1.68
SRGAP1-201ENST00000355086 B3GALT5-AS1P59052 145 aa4.58□□□□□ -1.68
SRGAP1-201ENST00000355086 OPRPNQ99935 248 aaPredicted RBP4.58□□□□□ -1.68
SRGAP1-201ENST00000355086 WIPF3A6NGB9 483 aa4.58□□□□□ -1.68
SRGAP1-201ENST00000355086 H0Y9J4 135 aa4.58□□□□□ -1.68
SRGAP1-201ENST00000355086 SH2D6Q7Z4S9 175 aa4.58□□□□□ -1.68
SRGAP1-201ENST00000355086 RLFQ13129 1914 aa4.58□□□□□ -1.68
SRGAP1-201ENST00000355086 NDUFS6O75380 124 aaKnown RBP4.58□□□□□ -1.68
SRGAP1-201ENST00000355086 FOXE3Q13461 319 aa4.58□□□□□ -1.68
SRGAP1-201ENST00000355086 ZC2HC1AQ96GY0 325 aa4.58□□□□□ -1.68
SRGAP1-201ENST00000355086 GNRH2O43555 120 aa4.58□□□□□ -1.68
SRGAP1-201ENST00000355086 PIFOQ8TCI5 191 aa4.58□□□□□ -1.68
SRGAP1-201ENST00000355086 C16orf74Q96GX8 76 aa4.58□□□□□ -1.68
SRGAP1-201ENST00000355086 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.58□□□□□ -1.68
SRGAP1-201ENST00000355086 IGFBPL1Q8WX77 278 aa4.58□□□□□ -1.68
SRGAP1-201ENST00000355086 TMEM14CQ9P0S9 112 aa4.58□□□□□ -1.68
SRGAP1-201ENST00000355086 KLK5Q9Y337 293 aaPredicted RBP4.58□□□□□ -1.68
SRGAP1-201ENST00000355086 LMO1P25800 156 aa4.58□□□□□ -1.68
SRGAP1-201ENST00000355086 QRFPP83859 136 aa4.58□□□□□ -1.68
SRGAP1-201ENST00000355086 H3BUA1 57 aa4.58□□□□□ -1.68
SRGAP1-201ENST00000355086 F8W735 103 aaPredicted RBP4.58□□□□□ -1.68
SRGAP1-201ENST00000355086 NTN5Q8WTR8 489 aaPredicted RBP4.58□□□□□ -1.68
SRGAP1-201ENST00000355086 FANCD2OSQ96PS1 177 aa4.58□□□□□ -1.68
SRGAP1-201ENST00000355086 TM2D2Q9BX73 214 aa4.58□□□□□ -1.68
SRGAP1-201ENST00000355086 ZNF493Q6ZR52 646 aa4.58□□□□□ -1.68
SRGAP1-201ENST00000355086 IGLV10-54A0A075B6I4 117 aa4.58□□□□□ -1.68
SRGAP1-201ENST00000355086 DKK2Q9UBU2 259 aa4.58□□□□□ -1.68
SRGAP1-201ENST00000355086 PSMB8P28062 276 aa4.57□□□□□ -1.68
SRGAP1-201ENST00000355086 C20orf144Q9BQM9 153 aa4.57□□□□□ -1.68
SRGAP1-201ENST00000355086 NDUFS7O75251 213 aa4.57□□□□□ -1.68
SRGAP1-201ENST00000355086 C12orf74Q32Q52 190 aa4.57□□□□□ -1.68
SRGAP1-201ENST00000355086 HIGD2BQ4VC39 106 aa4.57□□□□□ -1.68
SRGAP1-201ENST00000355086 NPYP01303 97 aa4.57□□□□□ -1.68
SRGAP1-201ENST00000355086 IGLL1P15814 213 aa4.57□□□□□ -1.68
SRGAP1-201ENST00000355086 RNF144BQ7Z419 303 aa4.57□□□□□ -1.68
SRGAP1-201ENST00000355086 IGKV3D-7A0A0C4DH55 119 aa4.57□□□□□ -1.68
SRGAP1-201ENST00000355086 IGKV4-1P06312 121 aa4.57□□□□□ -1.68
SRGAP1-201ENST00000355086 GP9P14770 177 aa4.57□□□□□ -1.68
SRGAP1-201ENST00000355086 AMTNQ6UX39 209 aa4.57□□□□□ -1.68
SRGAP1-201ENST00000355086 A0A0B4J2C4 111 aa4.57□□□□□ -1.68
SRGAP1-201ENST00000355086 FAM120AOSQ5T036 256 aa4.57□□□□□ -1.68
SRGAP1-201ENST00000355086 APRG1Q8IVJ8 170 aa4.57□□□□□ -1.68
SRGAP1-201ENST00000355086 CFC1BP0CG36 223 aa4.57□□□□□ -1.68
SRGAP1-201ENST00000355086 CFC1P0CG37 223 aa4.57□□□□□ -1.68
SRGAP1-201ENST00000355086 ATP6V0E2Q8NHE4 81 aa4.57□□□□□ -1.68
SRGAP1-201ENST00000355086 PRSS47A8MTI9 375 aa4.57□□□□□ -1.68
SRGAP1-201ENST00000355086 ACYP1P07311 99 aa4.57□□□□□ -1.68
SRGAP1-201ENST00000355086 ZFP2Q6ZN57 461 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms