RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 PRR31Q5SQ13 230 aa11.48□□□□□ -0.57
CTSA-202ENST00000354880 PGLYRP4Q96LB8 373 aa11.48□□□□□ -0.57
CTSA-202ENST00000354880 MDFIQ99750 246 aa11.48□□□□□ -0.57
CTSA-202ENST00000354880 CRXO43186 299 aaPredicted RBP11.47□□□□□ -0.57
CTSA-202ENST00000354880 RPS10P46783 165 aaKnown RBP11.47□□□□□ -0.57
CTSA-202ENST00000354880 MUC21Q5SSG8 566 aa11.47□□□□□ -0.57
CTSA-202ENST00000354880 LURAP1LQ8IV03 231 aa11.47□□□□□ -0.57
CTSA-202ENST00000354880 GRIFINA4D1Z8 144 aa11.46□□□□□ -0.57
CTSA-202ENST00000354880 NUTF2P61970 127 aaKnown RBP11.46□□□□□ -0.57
CTSA-202ENST00000354880 ANXA2RQ3ZCQ2 193 aa11.46□□□□□ -0.57
CTSA-202ENST00000354880 DEFB125Q8N687 156 aa11.46□□□□□ -0.57
CTSA-202ENST00000354880 OXLD1Q5BKU9 147 aa11.46□□□□□ -0.58
CTSA-202ENST00000354880 MRPL54Q6P161 138 aaKnown RBP11.46□□□□□ -0.58
CTSA-202ENST00000354880 FAM159AQ6UWV7 190 aa11.46□□□□□ -0.58
CTSA-202ENST00000354880 TPPP3Q9BW30 176 aa11.46□□□□□ -0.58
CTSA-202ENST00000354880 SRD5A3Q9H8P0 318 aa11.46□□□□□ -0.58
CTSA-202ENST00000354880 AMBPP02760 352 aa11.45□□□□□ -0.58
CTSA-202ENST00000354880 IGLC6P0CF74 106 aa11.45□□□□□ -0.58
CTSA-202ENST00000354880 FER1L6-AS1Q8NA97 138 aa11.45□□□□□ -0.58
CTSA-202ENST00000354880 KCNS1Q96KK3 526 aa11.45□□□□□ -0.58
CTSA-202ENST00000354880 LYZL1Q6UWQ5 148 aa11.44□□□□□ -0.58
CTSA-202ENST00000354880 ATP5L2Q7Z4Y8 100 aa11.44□□□□□ -0.58
CTSA-202ENST00000354880 A0A1B0GUT8 65 aa11.44□□□□□ -0.58
CTSA-202ENST00000354880 FRMD6-AS1P0C7T7 363 aa11.44□□□□□ -0.58
CTSA-202ENST00000354880 TDRG1Q3Y452 100 aa11.44□□□□□ -0.58
CTSA-202ENST00000354880 IGHV1OR15-1A0A075B7D0 117 aa11.43□□□□□ -0.58
CTSA-202ENST00000354880 INSP01308 110 aa11.43□□□□□ -0.58
CTSA-202ENST00000354880 ARMS2P0C7Q2 107 aa11.43□□□□□ -0.58
CTSA-202ENST00000354880 RBMY1A1P0DJD3 496 aaKnown RBP11.43□□□□□ -0.58
CTSA-202ENST00000354880 RBMY1CP0DJD4 496 aa11.43□□□□□ -0.58
CTSA-202ENST00000354880 RPL35AP18077 110 aaKnown RBP11.43□□□□□ -0.58
CTSA-202ENST00000354880 CTRLP40313 264 aa11.43□□□□□ -0.58
CTSA-202ENST00000354880 RBMY1FQ15415 496 aaKnown RBP11.43□□□□□ -0.58
CTSA-202ENST00000354880 BORCS7Q96B45 105 aa11.43□□□□□ -0.58
CTSA-202ENST00000354880 XCL2Q9UBD3 114 aa11.43□□□□□ -0.58
CTSA-202ENST00000354880 GNRH2O43555 120 aa11.42□□□□□ -0.58
CTSA-202ENST00000354880 ASIPP42127 132 aa11.42□□□□□ -0.58
CTSA-202ENST00000354880 RASL11AQ6T310 242 aa11.42□□□□□ -0.58
CTSA-202ENST00000354880 Q8N1Y9 231 aa11.42□□□□□ -0.58
CTSA-202ENST00000354880 C20orf144Q9BQM9 153 aa11.42□□□□□ -0.58
CTSA-202ENST00000354880 A0A1B0GXF2 115 aa11.42□□□□□ -0.58
CTSA-202ENST00000354880 F2Z2F3 143 aa11.42□□□□□ -0.58
CTSA-202ENST00000354880 S100A4P26447 101 aaKnown RBP11.42□□□□□ -0.58
CTSA-202ENST00000354880 HBBP68871 147 aa11.42□□□□□ -0.58
CTSA-202ENST00000354880 COX19Q49B96 90 aa11.42□□□□□ -0.58
CTSA-202ENST00000354880 TMA7Q9Y2S6 64 aaKnown RBP11.42□□□□□ -0.58
CTSA-202ENST00000354880 SNURFLB1AK76 121 aa11.41□□□□□ -0.58
CTSA-202ENST00000354880 H3BVH4 76 aa11.41□□□□□ -0.58
CTSA-202ENST00000354880 TRGC2P03986 189 aa11.41□□□□□ -0.58
CTSA-202ENST00000354880 OR5AL1P0C617 328 aa11.41□□□□□ -0.58
CTSA-202ENST00000354880 CAMPP49913 170 aa11.41□□□□□ -0.58
CTSA-202ENST00000354880 RIGQ13278 110 aa11.41□□□□□ -0.58
CTSA-202ENST00000354880 DNLZQ5SXM8 178 aa11.41□□□□□ -0.58
CTSA-202ENST00000354880 WDR73Q6P4I2 378 aa11.41□□□□□ -0.58
CTSA-202ENST00000354880 MORN3Q6PF18 240 aaPredicted RBP11.41□□□□□ -0.58
CTSA-202ENST00000354880 SSBP4Q9BWG4 385 aaPredicted RBP11.41□□□□□ -0.58
CTSA-202ENST00000354880 GNB1LQ9BYB4 327 aa11.41□□□□□ -0.58
CTSA-202ENST00000354880 DNAH3Q8TD57 4116 aa11.4□□□□□ -0.58
CTSA-202ENST00000354880 MUC21A0A0G2JKD1 596 aa11.4□□□□□ -0.58
CTSA-202ENST00000354880 MUC21A0A140T8X8 626 aa11.4□□□□□ -0.58
CTSA-202ENST00000354880 SNAI2O43623 268 aa11.4□□□□□ -0.58
CTSA-202ENST00000354880 RAB4BP61018 213 aa11.4□□□□□ -0.58
CTSA-202ENST00000354880 EGFEM1PQ0D2K5 195 aa11.4□□□□□ -0.58
CTSA-202ENST00000354880 CNFNQ9BYD5 112 aa11.4□□□□□ -0.58
CTSA-202ENST00000354880 C1orf196B1AJZ1 125 aa11.39□□□□□ -0.59
CTSA-202ENST00000354880 GIG44P09565 113 aaPredicted RBP11.39□□□□□ -0.59
CTSA-202ENST00000354880 SSTP61278 116 aa11.39□□□□□ -0.59
CTSA-202ENST00000354880 TMEM136Q6ZRR5 245 aa11.39□□□□□ -0.59
CTSA-202ENST00000354880 C1QTNF4Q9BXJ3 329 aa11.39□□□□□ -0.59
CTSA-202ENST00000354880 ZMAT5Q9UDW3 170 aaKnown RBP11.39□□□□□ -0.59
CTSA-202ENST00000354880 TP53TG3Q9ULZ0 132 aa11.39□□□□□ -0.59
CTSA-202ENST00000354880 TRAPPC1Q9Y5R8 145 aa11.39□□□□□ -0.59
CTSA-202ENST00000354880 A0A1B0GW15 77 aa11.39□□□□□ -0.59
CTSA-202ENST00000354880 MT-ND6P03923 174 aa11.39□□□□□ -0.59
CTSA-202ENST00000354880 MED14OSP0DP75 135 aa11.39□□□□□ -0.59
CTSA-202ENST00000354880 RNASE3P12724 160 aaKnown RBP11.39□□□□□ -0.59
CTSA-202ENST00000354880 FRZBQ92765 325 aa11.39□□□□□ -0.59
CTSA-202ENST00000354880 LINC01587Q99440 93 aa11.39□□□□□ -0.59
CTSA-202ENST00000354880 CBY3A6NI87 242 aa11.38□□□□□ -0.59
CTSA-202ENST00000354880 HLA-DQA1P01909 254 aa11.38□□□□□ -0.59
CTSA-202ENST00000354880 S100A8P05109 93 aa11.38□□□□□ -0.59
CTSA-202ENST00000354880 NTF3P20783 257 aa11.38□□□□□ -0.59
CTSA-202ENST00000354880 KRTAP10-11P60412 298 aa11.38□□□□□ -0.59
CTSA-202ENST00000354880 FABP9Q0Z7S8 132 aa11.38□□□□□ -0.59
CTSA-202ENST00000354880 TMEM256Q8N2U0 113 aa11.38□□□□□ -0.59
CTSA-202ENST00000354880 OR10AG1Q8NH19 301 aa11.38□□□□□ -0.59
CTSA-202ENST00000354880 TMEM208Q9BTX3 173 aa11.38□□□□□ -0.59
CTSA-202ENST00000354880 TIMM8BQ9Y5J9 83 aaPredicted RBP11.38□□□□□ -0.59
CTSA-202ENST00000354880 TRGV11A0A075B6L2 103 aa11.37□□□□□ -0.59
CTSA-202ENST00000354880 HTN1P15515 57 aa11.37□□□□□ -0.59
CTSA-202ENST00000354880 TWIST1Q15672 202 aa11.37□□□□□ -0.59
CTSA-202ENST00000354880 C1orf158Q8N1D5 194 aa11.37□□□□□ -0.59
CTSA-202ENST00000354880 LINC00467Q9BRT7 94 aa11.37□□□□□ -0.59
CTSA-202ENST00000354880 MRPL18Q9H0U6 180 aaKnown RBP11.37□□□□□ -0.59
CTSA-202ENST00000354880 CSTL1Q9H114 145 aa11.37□□□□□ -0.59
CTSA-202ENST00000354880 SCRT2Q9NQ03 307 aa11.37□□□□□ -0.59
CTSA-202ENST00000354880 IGHV3-16A0A0C4DH30 117 aa11.37□□□□□ -0.59
CTSA-202ENST00000354880 G3V4G9 280 aa11.37□□□□□ -0.59
CTSA-202ENST00000354880 PHOX2AO14813 284 aa11.37□□□□□ -0.59
CTSA-202ENST00000354880 SPANXN1Q5VSR9 72 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms