RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 CRYGBP07316 175 aa9.53□□□□□ -0.88
SMAD9-201ENST00000350148 MAPK1IP1LQ8NDC0 245 aa9.53□□□□□ -0.88
SMAD9-201ENST00000350148 GLMPQ8WWB7 406 aa9.53□□□□□ -0.88
SMAD9-201ENST00000350148 CHAC1Q9BUX1 264 aa9.53□□□□□ -0.88
SMAD9-201ENST00000350148 DPH3P1Q9H4G8 78 aa9.53□□□□□ -0.88
SMAD9-201ENST00000350148 PRSS46E5RG02 174 aa9.53□□□□□ -0.88
SMAD9-201ENST00000350148 PRR25Q96S07 402 aa9.53□□□□□ -0.88
SMAD9-201ENST00000350148 SMIM27A0A1W2PRY6 76 aa9.52□□□□□ -0.88
SMAD9-201ENST00000350148 RBMY1BA6NDE4 496 aaKnown RBP9.52□□□□□ -0.89
SMAD9-201ENST00000350148 RBMY1EA6NEQ0 496 aaKnown RBP9.52□□□□□ -0.89
SMAD9-201ENST00000350148 K7EMT4 169 aa9.52□□□□□ -0.89
SMAD9-201ENST00000350148 LTAP01374 205 aa9.52□□□□□ -0.89
SMAD9-201ENST00000350148 RBMY1DP0C7P1 496 aaKnown RBP9.52□□□□□ -0.89
SMAD9-201ENST00000350148 RBMY1A1P0DJD3 496 aaKnown RBP9.52□□□□□ -0.89
SMAD9-201ENST00000350148 RBMY1CP0DJD4 496 aa9.52□□□□□ -0.89
SMAD9-201ENST00000350148 Q0VG73 95 aa9.52□□□□□ -0.89
SMAD9-201ENST00000350148 PLNP26678 52 aa9.52□□□□□ -0.89
SMAD9-201ENST00000350148 CFHR4Q92496 578 aa9.52□□□□□ -0.89
SMAD9-201ENST00000350148 TRBV6-1A0A0K0K1D8 114 aa9.52□□□□□ -0.89
SMAD9-201ENST00000350148 GP9P14770 177 aa9.52□□□□□ -0.89
SMAD9-201ENST00000350148 AJUBAQ96IF1 538 aa9.52□□□□□ -0.89
SMAD9-201ENST00000350148 V9GYV3 84 aa9.52□□□□□ -0.89
SMAD9-201ENST00000350148 ZC2HC1AQ96GY0 325 aa9.51□□□□□ -0.89
SMAD9-201ENST00000350148 CLUHP3Q96NS8 147 aa9.51□□□□□ -0.89
SMAD9-201ENST00000350148 A0A0C4DFX4 3053 aa9.51□□□□□ -0.89
SMAD9-201ENST00000350148 POLEQ07864 2286 aa9.51□□□□□ -0.89
SMAD9-201ENST00000350148 CTSGP08311 255 aa9.51□□□□□ -0.89
SMAD9-201ENST00000350148 BRK1Q8WUW1 75 aa9.51□□□□□ -0.89
SMAD9-201ENST00000350148 C15orf53Q8NAA6 179 aa9.5□□□□□ -0.89
SMAD9-201ENST00000350148 KIAA1549Q9HCM3 1950 aa9.5□□□□□ -0.89
SMAD9-201ENST00000350148 TEX48A0A1B0GUV7 120 aa9.5□□□□□ -0.89
SMAD9-201ENST00000350148 NCR2O95944 276 aa9.5□□□□□ -0.89
SMAD9-201ENST00000350148 Q8TAT8 98 aa9.5□□□□□ -0.89
SMAD9-201ENST00000350148 PKIGQ9Y2B9 76 aa9.5□□□□□ -0.89
SMAD9-201ENST00000350148 BVES-AS1Q5T3Y7 98 aa9.5□□□□□ -0.89
SMAD9-201ENST00000350148 LINC00479Q96M42 142 aa9.5□□□□□ -0.89
SMAD9-201ENST00000350148 SUMO2P61956 95 aaKnown RBP9.49□□□□□ -0.89
SMAD9-201ENST00000350148 UBE2E2Q96LR5 201 aa9.49□□□□□ -0.89
SMAD9-201ENST00000350148 NBASA2RRP1 2371 aa9.49□□□□□ -0.89
SMAD9-201ENST00000350148 SRSF2Q01130 221 aaKnown RBP9.49□□□□□ -0.89
SMAD9-201ENST00000350148 PATE2Q6UY27 113 aa9.49□□□□□ -0.89
SMAD9-201ENST00000350148 FAM167A-AS1Q96KT0 104 aa9.49□□□□□ -0.89
SMAD9-201ENST00000350148 ANKHD1Q8IWZ3 2542 aaKnown RBP9.49□□□□□ -0.89
SMAD9-201ENST00000350148 TCTEX1D4Q5JR98 221 aa9.49□□□□□ -0.89
SMAD9-201ENST00000350148 ABCA4P78363 2273 aa9.48□□□□□ -0.89
SMAD9-201ENST00000350148 TRAV8-3A0A0A6YYJ7 113 aa9.48□□□□□ -0.89
SMAD9-201ENST00000350148 TEX43Q6ZNM6 134 aa9.48□□□□□ -0.89
SMAD9-201ENST00000350148 ERCC8Q13216 396 aa9.48□□□□□ -0.89
SMAD9-201ENST00000350148 RCHY1Q96PM5 261 aa9.48□□□□□ -0.89
SMAD9-201ENST00000350148 VGLL1Q99990 258 aa9.48□□□□□ -0.89
SMAD9-201ENST00000350148 H3BMG7 143 aa9.48□□□□□ -0.89
SMAD9-201ENST00000350148 GPHB5Q86YW7 130 aa9.48□□□□□ -0.89
SMAD9-201ENST00000350148 ZNF295-AS1Q8N0V1 137 aa9.48□□□□□ -0.89
SMAD9-201ENST00000350148 WIPF2Q8TF74 440 aaPredicted RBP9.48□□□□□ -0.89
SMAD9-201ENST00000350148 BRCA2P51587 3418 aa9.48□□□□□ -0.89
SMAD9-201ENST00000350148 TRGV2A0A075B6R0 118 aa9.47□□□□□ -0.89
SMAD9-201ENST00000350148 KIR2DL5BA0A0G2JN68 375 aa9.47□□□□□ -0.89
SMAD9-201ENST00000350148 KIR2DL5BA0A0G2JPC4 375 aa9.47□□□□□ -0.89
SMAD9-201ENST00000350148 IGF1P05019 195 aa9.47□□□□□ -0.89
SMAD9-201ENST00000350148 KIR2DL5AQ8N109 375 aa9.47□□□□□ -0.89
SMAD9-201ENST00000350148 RNF182Q8N6D2 247 aa9.47□□□□□ -0.89
SMAD9-201ENST00000350148 GHRHP01286 108 aa9.47□□□□□ -0.89
SMAD9-201ENST00000350148 FOXI2Q6ZQN5 318 aa9.47□□□□□ -0.89
SMAD9-201ENST00000350148 YPEL4Q96NS1 127 aa9.47□□□□□ -0.89
SMAD9-201ENST00000350148 G3V4G9 280 aa9.47□□□□□ -0.89
SMAD9-201ENST00000350148 FANCD2OSQ96PS1 177 aa9.47□□□□□ -0.89
SMAD9-201ENST00000350148 RHODO00212 210 aa9.47□□□□□ -0.89
SMAD9-201ENST00000350148 DEFB131AP59861 70 aa9.47□□□□□ -0.89
SMAD9-201ENST00000350148 LAGE3Q14657 143 aa9.47□□□□□ -0.89
SMAD9-201ENST00000350148 C11orf44Q8N8P7 122 aa9.47□□□□□ -0.89
SMAD9-201ENST00000350148 IGFL4Q6B9Z1 124 aa9.46□□□□□ -0.89
SMAD9-201ENST00000350148 AMN1Q8IY45 258 aa9.46□□□□□ -0.89
SMAD9-201ENST00000350148 SPTBN1Q01082 2364 aaKnown RBP9.46□□□□□ -0.89
SMAD9-201ENST00000350148 D6R8Y8 96 aa9.46□□□□□ -0.9
SMAD9-201ENST00000350148 BUB3O43684 328 aa9.46□□□□□ -0.9
SMAD9-201ENST00000350148 RBMY1FQ15415 496 aaKnown RBP9.46□□□□□ -0.9
SMAD9-201ENST00000350148 C1orf229Q6ZS94 237 aaPredicted RBP9.46□□□□□ -0.9
SMAD9-201ENST00000350148 PYGO2Q9BRQ0 406 aa9.46□□□□□ -0.9
SMAD9-201ENST00000350148 VCYO14598 125 aa9.46□□□□□ -0.9
SMAD9-201ENST00000350148 E7EUB6 86 aa9.45□□□□□ -0.9
SMAD9-201ENST00000350148 PPIFP30405 207 aaKnown RBP9.45□□□□□ -0.9
SMAD9-201ENST00000350148 IFI27P40305 119 aaPredicted RBP9.45□□□□□ -0.9
SMAD9-201ENST00000350148 LAMA3Q16787 3333 aa9.45□□□□□ -0.9
SMAD9-201ENST00000350148 PLCE1Q9P212 2302 aa9.45□□□□□ -0.9
SMAD9-201ENST00000350148 RNF183Q96D59 192 aa9.45□□□□□ -0.9
SMAD9-201ENST00000350148 IGKV1OR2-108A0A075B7D4 117 aa9.45□□□□□ -0.9
SMAD9-201ENST00000350148 VWC2LB2RUY7 222 aa9.45□□□□□ -0.9
SMAD9-201ENST00000350148 FAM104BQ5XKR9 115 aa9.45□□□□□ -0.9
SMAD9-201ENST00000350148 PRSS29PA6NIE9 313 aa9.45□□□□□ -0.9
SMAD9-201ENST00000350148 IGLL1P15814 213 aa9.45□□□□□ -0.9
SMAD9-201ENST00000350148 Q8N6K4 173 aa9.45□□□□□ -0.9
SMAD9-201ENST00000350148 C8orf49Q96NF6 230 aa9.45□□□□□ -0.9
SMAD9-201ENST00000350148 FRMD6-AS1P0C7T7 363 aa9.45□□□□□ -0.9
SMAD9-201ENST00000350148 IGHV4-31P0DP07 118 aa9.45□□□□□ -0.9
SMAD9-201ENST00000350148 HOXD3P31249 432 aaPredicted RBP9.45□□□□□ -0.9
SMAD9-201ENST00000350148 UTF1Q5T230 341 aa9.45□□□□□ -0.9
SMAD9-201ENST00000350148 DEFB125Q8N687 156 aa9.45□□□□□ -0.9
SMAD9-201ENST00000350148 RNF152Q8N8N0 203 aa9.45□□□□□ -0.9
SMAD9-201ENST00000350148 KNCNA6PVL3 124 aa9.44□□□□□ -0.9
SMAD9-201ENST00000350148 ARMS2P0C7Q2 107 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms