RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 PRR30Q53SZ7 412 aaPredicted RBP5.94□□□□□ -1.46
UBE2D3-204ENST00000349311 MORN3Q6PF18 240 aaPredicted RBP5.94□□□□□ -1.46
UBE2D3-204ENST00000349311 LYZL1Q6UWQ5 148 aa5.94□□□□□ -1.46
UBE2D3-204ENST00000349311 OR11H6Q8NGC7 330 aa5.94□□□□□ -1.46
UBE2D3-204ENST00000349311 TMEM167AQ8TBQ9 72 aa5.94□□□□□ -1.46
UBE2D3-204ENST00000349311 MYOZ3Q8TDC0 251 aa5.94□□□□□ -1.46
UBE2D3-204ENST00000349311 CARD19Q96LW7 228 aa5.94□□□□□ -1.46
UBE2D3-204ENST00000349311 HIF1ANQ9NWT6 349 aa5.94□□□□□ -1.46
UBE2D3-204ENST00000349311 TIMM8AO60220 97 aaPredicted RBP5.93□□□□□ -1.46
UBE2D3-204ENST00000349311 RBP4P02753 201 aa5.93□□□□□ -1.46
UBE2D3-204ENST00000349311 UBE2D3P61077 147 aa5.93□□□□□ -1.46
UBE2D3-204ENST00000349311 UBE2D2P62837 147 aa5.93□□□□□ -1.46
UBE2D3-204ENST00000349311 ALKBH6Q3KRA9 238 aa5.93□□□□□ -1.46
UBE2D3-204ENST00000349311 Q6ZSV7 163 aa5.93□□□□□ -1.46
UBE2D3-204ENST00000349311 Q6ZT83 130 aa5.93□□□□□ -1.46
UBE2D3-204ENST00000349311 NFE4Q86UQ8 179 aa5.93□□□□□ -1.46
UBE2D3-204ENST00000349311 AMN1Q8IY45 258 aa5.93□□□□□ -1.46
UBE2D3-204ENST00000349311 Q8N8P6 123 aa5.93□□□□□ -1.46
UBE2D3-204ENST00000349311 TPPP3Q9BW30 176 aa5.93□□□□□ -1.46
UBE2D3-204ENST00000349311 SPANXDQ9BXN6 97 aa5.93□□□□□ -1.46
UBE2D3-204ENST00000349311 KRTAP9-8Q9BYQ0 159 aa5.93□□□□□ -1.46
UBE2D3-204ENST00000349311 FBXL15Q9H469 300 aa5.93□□□□□ -1.46
UBE2D3-204ENST00000349311 SMG1Q96Q15 3661 aaKnown RBP5.93□□□□□ -1.46
UBE2D3-204ENST00000349311 RAI1Q7Z5J4 1906 aaPredicted RBP5.93□□□□□ -1.46
UBE2D3-204ENST00000349311 CADP27708 2225 aa5.93□□□□□ -1.46
UBE2D3-204ENST00000349311 A0A087WX48 190 aa5.92□□□□□ -1.46
UBE2D3-204ENST00000349311 TRAV12-1A0A0B4J245 112 aa5.92□□□□□ -1.46
UBE2D3-204ENST00000349311 TMEM213A2RRL7 107 aa5.92□□□□□ -1.46
UBE2D3-204ENST00000349311 SRRM5B3KS81 715 aa5.92□□□□□ -1.46
UBE2D3-204ENST00000349311 TEX22C9J3V5 150 aa5.92□□□□□ -1.46
UBE2D3-204ENST00000349311 SPRY3O43610 288 aa5.92□□□□□ -1.46
UBE2D3-204ENST00000349311 TFF1P04155 84 aa5.92□□□□□ -1.46
UBE2D3-204ENST00000349311 SCGB1C2P0DMR2 95 aa5.92□□□□□ -1.46
UBE2D3-204ENST00000349311 NANOS2P60321 138 aaKnown RBP5.92□□□□□ -1.46
UBE2D3-204ENST00000349311 C17orf58Q2M2W7 97 aa5.92□□□□□ -1.46
UBE2D3-204ENST00000349311 PVRIGQ6DKI7 326 aa5.92□□□□□ -1.46
UBE2D3-204ENST00000349311 PPP1R27Q86WC6 154 aa5.92□□□□□ -1.46
UBE2D3-204ENST00000349311 MAPKAPK5-AS1Q8N8E1 139 aa5.92□□□□□ -1.46
UBE2D3-204ENST00000349311 OR4C13Q8NGP0 309 aa5.92□□□□□ -1.46
UBE2D3-204ENST00000349311 FAM57AQ8TBR7 257 aa5.92□□□□□ -1.46
UBE2D3-204ENST00000349311 KLF14Q8TD94 323 aaPredicted RBP5.92□□□□□ -1.46
UBE2D3-204ENST00000349311 RASL11BQ9BPW5 248 aa5.92□□□□□ -1.46
UBE2D3-204ENST00000349311 COL6A6A6NMZ7 2263 aa5.92□□□□□ -1.46
UBE2D3-204ENST00000349311 IGKV1D-17A0A075B6S4 117 aa5.91□□□□□ -1.46
UBE2D3-204ENST00000349311 LOC107984156A0A0G2JMH3 177 aa5.91□□□□□ -1.46
UBE2D3-204ENST00000349311 IGHV3-64DA0A0J9YX35 117 aa5.91□□□□□ -1.46
UBE2D3-204ENST00000349311 INAFM1C9JVW0 142 aa5.91□□□□□ -1.46
UBE2D3-204ENST00000349311 H7C1H1 209 aa5.91□□□□□ -1.46
UBE2D3-204ENST00000349311 K7EM74 188 aa5.91□□□□□ -1.46
UBE2D3-204ENST00000349311 UBE2D1P51668 147 aa5.91□□□□□ -1.46
UBE2D3-204ENST00000349311 ADORA2A-AS1P86434 159 aa5.91□□□□□ -1.46
UBE2D3-204ENST00000349311 VMA21Q3ZAQ7 101 aa5.91□□□□□ -1.46
UBE2D3-204ENST00000349311 ZNF833PQ6ZTB9 187 aa5.91□□□□□ -1.46
UBE2D3-204ENST00000349311 COX8CQ7Z4L0 72 aa5.91□□□□□ -1.46
UBE2D3-204ENST00000349311 ARL17AQ8IVW1 177 aa5.91□□□□□ -1.46
UBE2D3-204ENST00000349311 OR10J6PQ8NGY7 276 aa5.91□□□□□ -1.46
UBE2D3-204ENST00000349311 SPXQ9BT56 116 aa5.91□□□□□ -1.46
UBE2D3-204ENST00000349311 TTTY13Q9BZ97 58 aa5.91□□□□□ -1.46
UBE2D3-204ENST00000349311 ZNF71Q9NQZ8 489 aaPredicted RBP5.91□□□□□ -1.46
UBE2D3-204ENST00000349311 SPANXCQ9NY87 97 aa5.91□□□□□ -1.46
UBE2D3-204ENST00000349311 HIVEP3Q5T1R4 2406 aa5.9□□□□□ -1.46
UBE2D3-204ENST00000349311 PKD1L2Q7Z442 2459 aa5.9□□□□□ -1.46
UBE2D3-204ENST00000349311 SPENQ96T58 3664 aaKnown RBP5.9□□□□□ -1.46
UBE2D3-204ENST00000349311 TRBV19A0A075B6N1 114 aa5.9□□□□□ -1.46
UBE2D3-204ENST00000349311 TRAV8-1A0A0A6YYK1 113 aa5.9□□□□□ -1.46
UBE2D3-204ENST00000349311 LINC01549A6NIU2 74 aa5.9□□□□□ -1.46
UBE2D3-204ENST00000349311 CCDC179H3BU77 68 aa5.9□□□□□ -1.46
UBE2D3-204ENST00000349311 SH2D1AO60880 128 aa5.9□□□□□ -1.46
UBE2D3-204ENST00000349311 IGHV1-2P23083 117 aa5.9□□□□□ -1.46
UBE2D3-204ENST00000349311 FXYD7P58549 80 aa5.9□□□□□ -1.46
UBE2D3-204ENST00000349311 WT1-ASQ06250 92 aa5.9□□□□□ -1.46
UBE2D3-204ENST00000349311 C5orf47Q569G3 176 aa5.9□□□□□ -1.46
UBE2D3-204ENST00000349311 ANKRD29Q8N6D5 301 aa5.9□□□□□ -1.46
UBE2D3-204ENST00000349311 PRR26Q8N8Z3 221 aa5.9□□□□□ -1.46
UBE2D3-204ENST00000349311 NEXN-AS1Q8NBZ9 246 aa5.9□□□□□ -1.46
UBE2D3-204ENST00000349311 LINC00574Q9H8X3 128 aa5.9□□□□□ -1.46
UBE2D3-204ENST00000349311 NGBQ9NPG2 151 aa5.9□□□□□ -1.46
UBE2D3-204ENST00000349311 MRPL35Q9NZE8 188 aaKnown RBP5.9□□□□□ -1.46
UBE2D3-204ENST00000349311 FAM215AQ9Y5M1 114 aa5.9□□□□□ -1.46
UBE2D3-204ENST00000349311 ATRXP46100 2492 aa5.89□□□□□ -1.47
UBE2D3-204ENST00000349311 TRAV40A0A0B4J280 105 aa5.89□□□□□ -1.47
UBE2D3-204ENST00000349311 A0A1W2PPI3 338 aa5.89□□□□□ -1.47
UBE2D3-204ENST00000349311 F8VRH5 84 aa5.89□□□□□ -1.47
UBE2D3-204ENST00000349311 SMKR1H3BMG3 65 aa5.89□□□□□ -1.47
UBE2D3-204ENST00000349311 IGKV3-15P01624 115 aa5.89□□□□□ -1.47
UBE2D3-204ENST00000349311 IGHV3-13P01766 116 aa5.89□□□□□ -1.47
UBE2D3-204ENST00000349311 LGALS1P09382 135 aaKnown RBP5.89□□□□□ -1.47
UBE2D3-204ENST00000349311 IGLC6P0CF74 106 aa5.89□□□□□ -1.47
UBE2D3-204ENST00000349311 HOXD3P31249 432 aaPredicted RBP5.89□□□□□ -1.47
UBE2D3-204ENST00000349311 FAM27E3Q08E93 113 aa5.89□□□□□ -1.47
UBE2D3-204ENST00000349311 LAGE3Q14657 143 aa5.89□□□□□ -1.47
UBE2D3-204ENST00000349311 TMEM78Q5T7P6 136 aa5.89□□□□□ -1.47
UBE2D3-204ENST00000349311 EXOC3-AS1Q8N2X6 119 aa5.89□□□□□ -1.47
UBE2D3-204ENST00000349311 LEAP2Q969E1 77 aa5.89□□□□□ -1.47
UBE2D3-204ENST00000349311 LINC01600Q96MT4 127 aa5.89□□□□□ -1.47
UBE2D3-204ENST00000349311 RAB1BQ9H0U4 201 aa5.89□□□□□ -1.47
UBE2D3-204ENST00000349311 PRORYQ9H606 182 aa5.89□□□□□ -1.47
UBE2D3-204ENST00000349311 BEX4Q9NWD9 120 aaPredicted RBP5.89□□□□□ -1.47
UBE2D3-204ENST00000349311 MDFICQ9P1T7 246 aa5.89□□□□□ -1.47
UBE2D3-204ENST00000349311 RPUSD1Q9UJJ7 312 aaKnown RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms