RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 A0A1B0GV72 72 aa11.76□□□□□ -0.53
TNFSF13-202ENST00000349228 K7EMI3 77 aa11.76□□□□□ -0.53
TNFSF13-202ENST00000349228 IGLV1-40P01703 118 aa11.76□□□□□ -0.53
TNFSF13-202ENST00000349228 PRSS1P07477 247 aa11.76□□□□□ -0.53
TNFSF13-202ENST00000349228 KIR3DS1Q14943 382 aa11.76□□□□□ -0.53
TNFSF13-202ENST00000349228 Q6ZVH6 145 aa11.76□□□□□ -0.53
TNFSF13-202ENST00000349228 GPHB5Q86YW7 130 aa11.76□□□□□ -0.53
TNFSF13-202ENST00000349228 APRG1Q8IVJ8 170 aa11.76□□□□□ -0.53
TNFSF13-202ENST00000349228 ZFAND2AQ8N6M9 145 aa11.76□□□□□ -0.53
TNFSF13-202ENST00000349228 OR4C5Q8NGB2 326 aa11.76□□□□□ -0.53
TNFSF13-202ENST00000349228 MYOZ3Q8TDC0 251 aa11.76□□□□□ -0.53
TNFSF13-202ENST00000349228 TMEM158Q8WZ71 300 aa11.76□□□□□ -0.53
TNFSF13-202ENST00000349228 DCHS2Q6V1P9 2916 aa11.76□□□□□ -0.53
TNFSF13-202ENST00000349228 NBASA2RRP1 2371 aa11.76□□□□□ -0.53
TNFSF13-202ENST00000349228 K7EMT4 169 aa11.76□□□□□ -0.53
TNFSF13-202ENST00000349228 GAS8-AS1O95177 125 aa11.76□□□□□ -0.53
TNFSF13-202ENST00000349228 FAM19A4Q96LR4 140 aa11.76□□□□□ -0.53
TNFSF13-202ENST00000349228 UFC1Q9Y3C8 167 aa11.76□□□□□ -0.53
TNFSF13-202ENST00000349228 ATRXP46100 2492 aa11.75□□□□□ -0.53
TNFSF13-202ENST00000349228 SMIM17P0DL12 118 aa11.75□□□□□ -0.53
TNFSF13-202ENST00000349228 ASIPP42127 132 aa11.75□□□□□ -0.53
TNFSF13-202ENST00000349228 LY6EQ16553 131 aa11.75□□□□□ -0.53
TNFSF13-202ENST00000349228 C18orf15Q96N68 181 aa11.75□□□□□ -0.53
TNFSF13-202ENST00000349228 DKK2Q9UBU2 259 aa11.75□□□□□ -0.53
TNFSF13-202ENST00000349228 HIVEP3Q5T1R4 2406 aa11.75□□□□□ -0.53
TNFSF13-202ENST00000349228 TACC2O95359 2948 aa11.74□□□□□ -0.53
TNFSF13-202ENST00000349228 B4DSR2 109 aa11.74□□□□□ -0.53
TNFSF13-202ENST00000349228 TRBV12-3P01733 135 aa11.74□□□□□ -0.53
TNFSF13-202ENST00000349228 IGKCP01834 107 aa11.74□□□□□ -0.53
TNFSF13-202ENST00000349228 HLA-DRB4P13762 266 aa11.74□□□□□ -0.53
TNFSF13-202ENST00000349228 GATA1P15976 413 aaPredicted RBP11.74□□□□□ -0.53
TNFSF13-202ENST00000349228 C20orf78Q9BR46 151 aa11.74□□□□□ -0.53
TNFSF13-202ENST00000349228 HLA-DRB4X5D2U9 266 aa11.74□□□□□ -0.53
TNFSF13-202ENST00000349228 COL6A6A6NMZ7 2263 aa11.74□□□□□ -0.53
TNFSF13-202ENST00000349228 H3BVH4 76 aa11.74□□□□□ -0.53
TNFSF13-202ENST00000349228 DPM2O94777 84 aa11.74□□□□□ -0.53
TNFSF13-202ENST00000349228 PPP1R17O96001 155 aa11.74□□□□□ -0.53
TNFSF13-202ENST00000349228 HIGD1BQ9P298 99 aa11.74□□□□□ -0.53
TNFSF13-202ENST00000349228 IGHV4-30-2A0A087WSY4 118 aa11.73□□□□□ -0.53
TNFSF13-202ENST00000349228 H3BRM9 83 aa11.73□□□□□ -0.53
TNFSF13-202ENST00000349228 WIPF1O43516 503 aa11.73□□□□□ -0.53
TNFSF13-202ENST00000349228 S100A4P26447 101 aaKnown RBP11.73□□□□□ -0.53
TNFSF13-202ENST00000349228 PRR9Q5T870 116 aa11.73□□□□□ -0.53
TNFSF13-202ENST00000349228 RHPN1-AS1Q9BWJ2 59 aa11.73□□□□□ -0.53
TNFSF13-202ENST00000349228 DAZ1Q9NQZ3 744 aaKnown RBP11.73□□□□□ -0.53
TNFSF13-202ENST00000349228 C7orf71A4D174 169 aa11.72□□□□□ -0.53
TNFSF13-202ENST00000349228 TMEM8BA6NDV4 472 aa11.72□□□□□ -0.53
TNFSF13-202ENST00000349228 DPH3P1Q9H4G8 78 aa11.72□□□□□ -0.53
TNFSF13-202ENST00000349228 HHLA3Q9XRX5 114 aa11.72□□□□□ -0.53
TNFSF13-202ENST00000349228 SPTBN1Q01082 2364 aaKnown RBP11.72□□□□□ -0.53
TNFSF13-202ENST00000349228 TMEM89A2RUT3 159 aa11.72□□□□□ -0.53
TNFSF13-202ENST00000349228 M0R381 172 aa11.72□□□□□ -0.53
TNFSF13-202ENST00000349228 ID1P41134 155 aa11.72□□□□□ -0.53
TNFSF13-202ENST00000349228 NMUP48645 174 aa11.72□□□□□ -0.53
TNFSF13-202ENST00000349228 HERV-K104P63124 156 aa11.72□□□□□ -0.53
TNFSF13-202ENST00000349228 CFHR3Q02985 330 aa11.72□□□□□ -0.53
TNFSF13-202ENST00000349228 ORMDL2Q53FV1 153 aa11.72□□□□□ -0.53
TNFSF13-202ENST00000349228 ADAMTSL5Q6ZMM2 481 aa11.72□□□□□ -0.53
TNFSF13-202ENST00000349228 WFDC3Q8IUB2 231 aa11.72□□□□□ -0.53
TNFSF13-202ENST00000349228 FOXC2Q99958 501 aa11.72□□□□□ -0.53
TNFSF13-202ENST00000349228 KLK15Q9H2R5 256 aa11.72□□□□□ -0.53
TNFSF13-202ENST00000349228 IGHV3-11P01762 117 aa11.71□□□□□ -0.53
TNFSF13-202ENST00000349228 SLC25A16P16260 332 aa11.71□□□□□ -0.53
TNFSF13-202ENST00000349228 RPL11P62913 178 aaKnown RBP11.71□□□□□ -0.53
TNFSF13-202ENST00000349228 BLCAPP62952 87 aa11.71□□□□□ -0.53
TNFSF13-202ENST00000349228 SMIM2Q9BVW6 85 aa11.71□□□□□ -0.53
TNFSF13-202ENST00000349228 PHLDA3Q9Y5J5 127 aa11.71□□□□□ -0.53
TNFSF13-202ENST00000349228 VPS25Q9BRG1 176 aa11.7□□□□□ -0.54
TNFSF13-202ENST00000349228 TRAV12-1A0A0B4J245 112 aa11.7□□□□□ -0.54
TNFSF13-202ENST00000349228 AMMECR1LQ6DCA0 310 aa11.7□□□□□ -0.54
TNFSF13-202ENST00000349228 AP1S3Q96PC3 154 aa11.7□□□□□ -0.54
TNFSF13-202ENST00000349228 A0A087WX48 190 aa11.69□□□□□ -0.54
TNFSF13-202ENST00000349228 PLNP26678 52 aa11.69□□□□□ -0.54
TNFSF13-202ENST00000349228 ANXA2RQ3ZCQ2 193 aa11.69□□□□□ -0.54
TNFSF13-202ENST00000349228 GEMIN7Q9H840 131 aaKnown RBP11.69□□□□□ -0.54
TNFSF13-202ENST00000349228 YAE1D1Q9NRH1 226 aa11.69□□□□□ -0.54
TNFSF13-202ENST00000349228 MED13LQ71F56 2210 aa11.69□□□□□ -0.54
TNFSF13-202ENST00000349228 TRAV26-2A0A0B4J265 109 aa11.69□□□□□ -0.54
TNFSF13-202ENST00000349228 C9orf118A6NHY6 69 aa11.69□□□□□ -0.54
TNFSF13-202ENST00000349228 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.69□□□□□ -0.54
TNFSF13-202ENST00000349228 RNASE4P34096 147 aaKnown RBP11.69□□□□□ -0.54
TNFSF13-202ENST00000349228 Q6ZQT7 251 aa11.69□□□□□ -0.54
TNFSF13-202ENST00000349228 PCP2Q8IVA1 136 aa11.69□□□□□ -0.54
TNFSF13-202ENST00000349228 LINC01549A6NIU2 74 aa11.68□□□□□ -0.54
TNFSF13-202ENST00000349228 SCGB1A1P11684 91 aa11.68□□□□□ -0.54
TNFSF13-202ENST00000349228 CRYBA4P53673 196 aa11.68□□□□□ -0.54
TNFSF13-202ENST00000349228 SUMO2P61956 95 aaKnown RBP11.68□□□□□ -0.54
TNFSF13-202ENST00000349228 POM121L12Q8N7R1 296 aa11.68□□□□□ -0.54
TNFSF13-202ENST00000349228 NXPH4O95158 308 aa11.67□□□□□ -0.54
TNFSF13-202ENST00000349228 RNF151Q2KHN1 245 aa11.67□□□□□ -0.54
TNFSF13-202ENST00000349228 J3QLI3 93 aa11.67□□□□□ -0.54
TNFSF13-202ENST00000349228 GTF2H5Q6ZYL4 71 aa11.67□□□□□ -0.54
TNFSF13-202ENST00000349228 RNF152Q8N8N0 203 aa11.67□□□□□ -0.54
TNFSF13-202ENST00000349228 RASL10AQ92737 203 aa11.67□□□□□ -0.54
TNFSF13-202ENST00000349228 TOMM6Q96B49 74 aa11.67□□□□□ -0.54
TNFSF13-202ENST00000349228 TRAV8-6A0A0B4J262 113 aa11.66□□□□□ -0.54
TNFSF13-202ENST00000349228 KLLNB2CW77 178 aa11.66□□□□□ -0.54
TNFSF13-202ENST00000349228 H7C1H1 209 aa11.66□□□□□ -0.54
TNFSF13-202ENST00000349228 RPL32P62910 135 aaKnown RBP11.66□□□□□ -0.54
TNFSF13-202ENST00000349228 ZC2HC1BQ5TFG8 222 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms