RNA–Protein interactions for RNA: ENST00000348069.6

NLRP3-202, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-202ENST00000348069 TMEM75Q8N9X5 138 aa6.36□□□□□ -1.39
NLRP3-202ENST00000348069 RITA1Q96K30 269 aa6.36□□□□□ -1.39
NLRP3-202ENST00000348069 SPXQ9BT56 116 aa6.36□□□□□ -1.39
NLRP3-202ENST00000348069 C21orf62Q9NYP8 219 aa6.36□□□□□ -1.39
NLRP3-202ENST00000348069 HOXA3O43365 443 aaPredicted RBP6.36□□□□□ -1.39
NLRP3-202ENST00000348069 TNFRSF6BO95407 300 aa6.36□□□□□ -1.39
NLRP3-202ENST00000348069 LHBP01229 141 aa6.36□□□□□ -1.39
NLRP3-202ENST00000348069 SCGB3A1Q96QR1 104 aa6.36□□□□□ -1.39
NLRP3-202ENST00000348069 C7orf69Q9H7B7 122 aa6.36□□□□□ -1.39
NLRP3-202ENST00000348069 TRBV25-1A0A075B6N4 114 aa6.35□□□□□ -1.39
NLRP3-202ENST00000348069 M0R381 172 aa6.35□□□□□ -1.39
NLRP3-202ENST00000348069 GATA4P43694 442 aa6.35□□□□□ -1.39
NLRP3-202ENST00000348069 TEP1Q99973 2627 aaKnown RBP6.35□□□□□ -1.39
NLRP3-202ENST00000348069 IGHV1-3A0A0C4DH29 117 aa6.35□□□□□ -1.39
NLRP3-202ENST00000348069 F8W1H4 67 aa6.35□□□□□ -1.39
NLRP3-202ENST00000348069 TNFRSF13BO14836 293 aaPredicted RBP6.35□□□□□ -1.39
NLRP3-202ENST00000348069 RUSC1-AS1Q66K80 236 aa6.35□□□□□ -1.39
NLRP3-202ENST00000348069 LYPD1Q8N2G4 141 aa6.35□□□□□ -1.39
NLRP3-202ENST00000348069 MRPL35Q9NZE8 188 aaKnown RBP6.35□□□□□ -1.39
NLRP3-202ENST00000348069 HERVK_113P61574 105 aa6.35□□□□□ -1.39
NLRP3-202ENST00000348069 MSRB1Q9NZV6 116 aa6.35□□□□□ -1.39
NLRP3-202ENST00000348069 TMEM14CQ9P0S9 112 aa6.34□□□□□ -1.39
NLRP3-202ENST00000348069 SPINK8P0C7L1 97 aa6.34□□□□□ -1.39
NLRP3-202ENST00000348069 EFNA4P52798 201 aa6.34□□□□□ -1.39
NLRP3-202ENST00000348069 ZNF562Q6V9R5 426 aa6.34□□□□□ -1.39
NLRP3-202ENST00000348069 CEND1Q8N111 149 aa6.34□□□□□ -1.39
NLRP3-202ENST00000348069 SPATA25Q9BR10 227 aa6.34□□□□□ -1.39
NLRP3-202ENST00000348069 DPM3Q9P2X0 92 aa6.34□□□□□ -1.39
NLRP3-202ENST00000348069 GATA1P15976 413 aaPredicted RBP6.34□□□□□ -1.4
NLRP3-202ENST00000348069 MYCNOSP40205 109 aa6.34□□□□□ -1.4
NLRP3-202ENST00000348069 RPL32P62910 135 aaKnown RBP6.34□□□□□ -1.4
NLRP3-202ENST00000348069 LAGE3Q14657 143 aa6.34□□□□□ -1.4
NLRP3-202ENST00000348069 VMO1Q7Z5L0 202 aa6.34□□□□□ -1.4
NLRP3-202ENST00000348069 SMIM20Q8N5G0 67 aa6.34□□□□□ -1.4
NLRP3-202ENST00000348069 DEFB104AQ8WTQ1 72 aa6.34□□□□□ -1.4
NLRP3-202ENST00000348069 ZANQ9Y493 2812 aa6.34□□□□□ -1.4
NLRP3-202ENST00000348069 CELSR2Q9HCU4 2923 aa6.33□□□□□ -1.4
NLRP3-202ENST00000348069 ZNF815PA8K554 130 aa6.33□□□□□ -1.4
NLRP3-202ENST00000348069 EGR2P11161 476 aaPredicted RBP6.33□□□□□ -1.4
NLRP3-202ENST00000348069 PRR25Q96S07 402 aa6.33□□□□□ -1.4
NLRP3-202ENST00000348069 RNF223E7ERA6 249 aa6.33□□□□□ -1.4
NLRP3-202ENST00000348069 IGKV1-17P01599 117 aa6.33□□□□□ -1.4
NLRP3-202ENST00000348069 SRSF1Q07955 248 aaKnown RBP eCLIP6.33□□□□□ -1.4
NLRP3-202ENST00000348069 SIGLEC15Q6ZMC9 328 aa6.33□□□□□ -1.4
NLRP3-202ENST00000348069 Q71RC1 249 aaPredicted RBP6.33□□□□□ -1.4
NLRP3-202ENST00000348069 SYT8Q8NBV8 401 aa6.33□□□□□ -1.4
NLRP3-202ENST00000348069 PIMREGQ9BSJ6 248 aa6.33□□□□□ -1.4
NLRP3-202ENST00000348069 PHLDA3Q9Y5J5 127 aa6.33□□□□□ -1.4
NLRP3-202ENST00000348069 NBR2O15453 112 aa6.33□□□□□ -1.4
NLRP3-202ENST00000348069 DLX6P56179 175 aa6.33□□□□□ -1.4
NLRP3-202ENST00000348069 ERCC8Q13216 396 aa6.33□□□□□ -1.4
NLRP3-202ENST00000348069 C12orf74Q32Q52 190 aa6.33□□□□□ -1.4
NLRP3-202ENST00000348069 YAE1D1Q9NRH1 226 aa6.33□□□□□ -1.4
NLRP3-202ENST00000348069 ITPR3Q14573 2671 aa6.32□□□□□ -1.4
NLRP3-202ENST00000348069 IGLL5B9A064 214 aa6.32□□□□□ -1.4
NLRP3-202ENST00000348069 ATP5G2Q06055 141 aa6.32□□□□□ -1.4
NLRP3-202ENST00000348069 TMEM170BQ5T4T1 132 aa6.32□□□□□ -1.4
NLRP3-202ENST00000348069 ZNF491Q8N8L2 437 aa6.32□□□□□ -1.4
NLRP3-202ENST00000348069 C11orf44Q8N8P7 122 aa6.32□□□□□ -1.4
NLRP3-202ENST00000348069 C16orf92Q96LL3 132 aa6.32□□□□□ -1.4
NLRP3-202ENST00000348069 TRAV26-2A0A0B4J265 109 aa6.32□□□□□ -1.4
NLRP3-202ENST00000348069 ZFP36P26651 326 aaKnown RBP6.32□□□□□ -1.4
NLRP3-202ENST00000348069 FOXE3Q13461 319 aa6.32□□□□□ -1.4
NLRP3-202ENST00000348069 FOXI2Q6ZQN5 318 aa6.32□□□□□ -1.4
NLRP3-202ENST00000348069 RNF183Q96D59 192 aa6.32□□□□□ -1.4
NLRP3-202ENST00000348069 BEX4Q9NWD9 120 aaPredicted RBP6.32□□□□□ -1.4
NLRP3-202ENST00000348069 COL27A1Q8IZC6 1860 aaPredicted RBP6.32□□□□□ -1.4
NLRP3-202ENST00000348069 GCN1Q92616 2671 aaKnown RBP6.32□□□□□ -1.4
NLRP3-202ENST00000348069 H3BRN7 92 aa6.32□□□□□ -1.4
NLRP3-202ENST00000348069 BUB1B-PAK6H3BSN5 160 aa6.32□□□□□ -1.4
NLRP3-202ENST00000348069 TMEM155Q4W5P6 130 aa6.32□□□□□ -1.4
NLRP3-202ENST00000348069 IL17RELQ6ZVW7 336 aa6.32□□□□□ -1.4
NLRP3-202ENST00000348069 DLX4Q92988 240 aaPredicted RBP6.32□□□□□ -1.4
NLRP3-202ENST00000348069 ANAPC13Q9BS18 74 aa6.32□□□□□ -1.4
NLRP3-202ENST00000348069 FLNAP21333 2647 aaKnown RBP6.32□□□□□ -1.4
NLRP3-202ENST00000348069 IGKV2D-26A0A0A0MRZ7 120 aa6.31□□□□□ -1.4
NLRP3-202ENST00000348069 IGHV4-61A0A0C4DH41 118 aa6.31□□□□□ -1.4
NLRP3-202ENST00000348069 IGLV2-23P01705 113 aa6.31□□□□□ -1.4
NLRP3-202ENST00000348069 HLA-DMBP28068 263 aa6.31□□□□□ -1.4
NLRP3-202ENST00000348069 PDE6HQ13956 83 aa6.31□□□□□ -1.4
NLRP3-202ENST00000348069 TEX36Q5VZQ5 186 aa6.31□□□□□ -1.4
NLRP3-202ENST00000348069 IGHV4-30-2A0A087WSY4 118 aa6.31□□□□□ -1.4
NLRP3-202ENST00000348069 INS-IGF2F8WCM5 200 aa6.31□□□□□ -1.4
NLRP3-202ENST00000348069 IGHV4-39P01824 125 aa6.31□□□□□ -1.4
NLRP3-202ENST00000348069 PLNP26678 52 aa6.31□□□□□ -1.4
NLRP3-202ENST00000348069 LINC01549A6NIU2 74 aa6.31□□□□□ -1.4
NLRP3-202ENST00000348069 LINC01559Q495D7 138 aa6.31□□□□□ -1.4
NLRP3-202ENST00000348069 DTX2Q86UW9 622 aa6.31□□□□□ -1.4
NLRP3-202ENST00000348069 ZNF843Q8N446 348 aa6.31□□□□□ -1.4
NLRP3-202ENST00000348069 AGRNO00468 2067 aa6.3□□□□□ -1.4
NLRP3-202ENST00000348069 H7C1H1 209 aa6.3□□□□□ -1.4
NLRP3-202ENST00000348069 IGHV3-11P01762 117 aa6.3□□□□□ -1.4
NLRP3-202ENST00000348069 SAA4P35542 130 aa6.3□□□□□ -1.4
NLRP3-202ENST00000348069 EMP1P54849 157 aa6.3□□□□□ -1.4
NLRP3-202ENST00000348069 TTC32Q5I0X7 151 aa6.3□□□□□ -1.4
NLRP3-202ENST00000348069 LINC00311Q8N616 119 aa6.3□□□□□ -1.4
NLRP3-202ENST00000348069 TRAV8-2A0A0B4J237 113 aa6.3□□□□□ -1.4
NLRP3-202ENST00000348069 PRSS2P07478 247 aa6.3□□□□□ -1.4
NLRP3-202ENST00000348069 RNF182Q8N6D2 247 aa6.3□□□□□ -1.4
NLRP3-202ENST00000348069 TEX29Q8N6K0 151 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms