RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 PAM16Q9Y3D7 125 aa10.61□□□□□ -0.71
CDK5RAP1-202ENST00000346416 U3KQK5 164 aa10.61□□□□□ -0.71
CDK5RAP1-202ENST00000346416 TRAV21A0A0B4J279 112 aa10.61□□□□□ -0.71
CDK5RAP1-202ENST00000346416 IGHV1-24A0A0C4DH33 117 aa10.61□□□□□ -0.71
CDK5RAP1-202ENST00000346416 ORMDL3Q8N138 153 aa10.61□□□□□ -0.71
CDK5RAP1-202ENST00000346416 MIEN1Q9BRT3 115 aa10.61□□□□□ -0.71
CDK5RAP1-202ENST00000346416 TRBV7-9A0A0J9YWB2 115 aa10.6□□□□□ -0.71
CDK5RAP1-202ENST00000346416 ZNF688P0C7X2 276 aa10.6□□□□□ -0.71
CDK5RAP1-202ENST00000346416 RAB4AP20338 218 aa10.6□□□□□ -0.71
CDK5RAP1-202ENST00000346416 SLURP1P55000 103 aa10.6□□□□□ -0.71
CDK5RAP1-202ENST00000346416 KIR3DS1Q14943 382 aa10.6□□□□□ -0.71
CDK5RAP1-202ENST00000346416 TDRG1Q3Y452 100 aa10.6□□□□□ -0.71
CDK5RAP1-202ENST00000346416 MRPL52Q86TS9 123 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP1-202ENST00000346416 OR10AG1Q8NH19 301 aa10.6□□□□□ -0.71
CDK5RAP1-202ENST00000346416 PRELID3AQ96N28 172 aa10.6□□□□□ -0.71
CDK5RAP1-202ENST00000346416 ESM1Q9NQ30 184 aa10.6□□□□□ -0.71
CDK5RAP1-202ENST00000346416 SORL1Q92673 2214 aa10.6□□□□□ -0.71
CDK5RAP1-202ENST00000346416 RNASE4P34096 147 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP1-202ENST00000346416 KHDC1LQ5JSQ8 128 aa10.6□□□□□ -0.71
CDK5RAP1-202ENST00000346416 DMRTA1Q5VZB9 504 aa10.6□□□□□ -0.71
CDK5RAP1-202ENST00000346416 EBLN2Q6P2I7 272 aa10.6□□□□□ -0.71
CDK5RAP1-202ENST00000346416 K7EQG2 157 aa10.59□□□□□ -0.71
CDK5RAP1-202ENST00000346416 M0R143 59 aa10.59□□□□□ -0.71
CDK5RAP1-202ENST00000346416 OR5AL1P0C617 328 aa10.59□□□□□ -0.71
CDK5RAP1-202ENST00000346416 CKS2P33552 79 aa10.59□□□□□ -0.71
CDK5RAP1-202ENST00000346416 SNRPD3P62318 126 aaKnown RBP10.59□□□□□ -0.71
CDK5RAP1-202ENST00000346416 PSMG4Q5JS54 123 aa10.59□□□□□ -0.71
CDK5RAP1-202ENST00000346416 APRG1Q8IVJ8 170 aa10.59□□□□□ -0.71
CDK5RAP1-202ENST00000346416 LINC00469Q8N7U9 141 aa10.59□□□□□ -0.71
CDK5RAP1-202ENST00000346416 OR11H1Q8NG94 326 aa10.59□□□□□ -0.71
CDK5RAP1-202ENST00000346416 PRSS3P2Q8NHM4 247 aa10.59□□□□□ -0.71
CDK5RAP1-202ENST00000346416 SETD2Q9BYW2 2564 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP1-202ENST00000346416 LINC01619G3V211 115 aa10.58□□□□□ -0.72
CDK5RAP1-202ENST00000346416 SMKR1H3BMG3 65 aa10.58□□□□□ -0.72
CDK5RAP1-202ENST00000346416 ADAMTSL5Q6ZMM2 481 aa10.58□□□□□ -0.72
CDK5RAP1-202ENST00000346416 ZNF705AQ6ZN79 300 aaPredicted RBP10.58□□□□□ -0.72
CDK5RAP1-202ENST00000346416 C4orf3Q8WVX3 66 aa10.58□□□□□ -0.72
CDK5RAP1-202ENST00000346416 RNF185Q96GF1 192 aa10.58□□□□□ -0.72
CDK5RAP1-202ENST00000346416 AP5S1Q9NUS5 200 aa10.58□□□□□ -0.72
CDK5RAP1-202ENST00000346416 A0A1B0GV90 55 aa10.58□□□□□ -0.72
CDK5RAP1-202ENST00000346416 H3BVH4 76 aa10.58□□□□□ -0.72
CDK5RAP1-202ENST00000346416 SNAI2O43623 268 aa10.58□□□□□ -0.72
CDK5RAP1-202ENST00000346416 IFI27P40305 119 aaPredicted RBP10.58□□□□□ -0.72
CDK5RAP1-202ENST00000346416 DUX3Q96PT4 197 aa10.58□□□□□ -0.72
CDK5RAP1-202ENST00000346416 LOC389332A0A1B0GUA5 103 aa10.57□□□□□ -0.72
CDK5RAP1-202ENST00000346416 NCR2O95944 276 aa10.57□□□□□ -0.72
CDK5RAP1-202ENST00000346416 BTF3P20290 206 aaKnown RBP10.57□□□□□ -0.72
CDK5RAP1-202ENST00000346416 HIST2H2BDQ6DRA6 164 aa10.57□□□□□ -0.72
CDK5RAP1-202ENST00000346416 FA2HQ7L5A8 372 aa10.57□□□□□ -0.72
CDK5RAP1-202ENST00000346416 DPF1Q92782 380 aa10.57□□□□□ -0.72
CDK5RAP1-202ENST00000346416 SIGLEC8Q9NYZ4 499 aa10.57□□□□□ -0.72
CDK5RAP1-202ENST00000346416 NOTCH2Q04721 2471 aa10.57□□□□□ -0.72
CDK5RAP1-202ENST00000346416 KLLNB2CW77 178 aa10.57□□□□□ -0.72
CDK5RAP1-202ENST00000346416 LEPROTL1O95214 131 aa10.57□□□□□ -0.72
CDK5RAP1-202ENST00000346416 EVI2AP22794 236 aa10.57□□□□□ -0.72
CDK5RAP1-202ENST00000346416 ANXA2RQ3ZCQ2 193 aa10.57□□□□□ -0.72
CDK5RAP1-202ENST00000346416 SPANXN1Q5VSR9 72 aa10.57□□□□□ -0.72
CDK5RAP1-202ENST00000346416 KLHL30-AS1Q8NEE0 82 aa10.57□□□□□ -0.72
CDK5RAP1-202ENST00000346416 OR1N2Q8NGR9 330 aa10.57□□□□□ -0.72
CDK5RAP1-202ENST00000346416 WFDC12Q8WWY7 111 aa10.57□□□□□ -0.72
CDK5RAP1-202ENST00000346416 SNHG12Q9BXW3 62 aa10.57□□□□□ -0.72
CDK5RAP1-202ENST00000346416 IGHV4-4A0A075B6R2 117 aa10.56□□□□□ -0.72
CDK5RAP1-202ENST00000346416 EREGO14944 169 aa10.56□□□□□ -0.72
CDK5RAP1-202ENST00000346416 NPYP01303 97 aa10.56□□□□□ -0.72
CDK5RAP1-202ENST00000346416 SPATA45Q537H7 98 aa10.56□□□□□ -0.72
CDK5RAP1-202ENST00000346416 TIMM8BQ9Y5J9 83 aaPredicted RBP10.56□□□□□ -0.72
CDK5RAP1-202ENST00000346416 A0A0J9YX75 114 aa10.55□□□□□ -0.72
CDK5RAP1-202ENST00000346416 PPBPP02775 128 aa10.55□□□□□ -0.72
CDK5RAP1-202ENST00000346416 CACNG7P62955 275 aa10.55□□□□□ -0.72
CDK5RAP1-202ENST00000346416 LINC00173Q6ZV60 143 aa10.55□□□□□ -0.72
CDK5RAP1-202ENST00000346416 ANK3Q12955 4377 aaKnown RBP10.55□□□□□ -0.72
CDK5RAP1-202ENST00000346416 AGRNO00468 2067 aa10.55□□□□□ -0.72
CDK5RAP1-202ENST00000346416 GAS8-AS1O95177 125 aa10.55□□□□□ -0.72
CDK5RAP1-202ENST00000346416 S100A4P26447 101 aaKnown RBP10.55□□□□□ -0.72
CDK5RAP1-202ENST00000346416 ASIPP42127 132 aa10.55□□□□□ -0.72
CDK5RAP1-202ENST00000346416 OR9G4Q8NGQ1 327 aa10.55□□□□□ -0.72
CDK5RAP1-202ENST00000346416 TMEM70Q9BUB7 260 aa10.55□□□□□ -0.72
CDK5RAP1-202ENST00000346416 SMIM15Q7Z3B0 74 aa10.54□□□□□ -0.72
CDK5RAP1-202ENST00000346416 DLX4Q92988 240 aaPredicted RBP10.54□□□□□ -0.72
CDK5RAP1-202ENST00000346416 PEMTQ9UBM1 199 aa10.54□□□□□ -0.72
CDK5RAP1-202ENST00000346416 GNRH2O43555 120 aa10.54□□□□□ -0.72
CDK5RAP1-202ENST00000346416 TCF21O43680 179 aa10.54□□□□□ -0.72
CDK5RAP1-202ENST00000346416 IGKV3-20P01619 116 aa10.54□□□□□ -0.72
CDK5RAP1-202ENST00000346416 C20orf202A1L168 122 aa10.53□□□□□ -0.72
CDK5RAP1-202ENST00000346416 SPRY2O43597 315 aa10.53□□□□□ -0.72
CDK5RAP1-202ENST00000346416 SPATA12Q7Z6I5 190 aa10.53□□□□□ -0.72
CDK5RAP1-202ENST00000346416 C11orf44Q8N8P7 122 aa10.53□□□□□ -0.72
CDK5RAP1-202ENST00000346416 UQCR10Q9UDW1 63 aa10.53□□□□□ -0.72
CDK5RAP1-202ENST00000346416 M0R381 172 aa10.52□□□□□ -0.72
CDK5RAP1-202ENST00000346416 CRXO43186 299 aaPredicted RBP10.52□□□□□ -0.72
CDK5RAP1-202ENST00000346416 NUTF2P61970 127 aaKnown RBP10.52□□□□□ -0.72
CDK5RAP1-202ENST00000346416 ATOH7Q8N100 152 aa10.52□□□□□ -0.72
CDK5RAP1-202ENST00000346416 ODF3Q96PU9 254 aa10.52□□□□□ -0.72
CDK5RAP1-202ENST00000346416 LAMTOR2Q9Y2Q5 125 aa10.52□□□□□ -0.72
CDK5RAP1-202ENST00000346416 PHLDA3Q9Y5J5 127 aa10.52□□□□□ -0.72
CDK5RAP1-202ENST00000346416 TRAV12-3A0A0B4J271 114 aa10.52□□□□□ -0.73
CDK5RAP1-202ENST00000346416 SYS1-DBNDD2H3BUS1 97 aa10.52□□□□□ -0.73
CDK5RAP1-202ENST00000346416 TNFRSF6BO95407 300 aa10.52□□□□□ -0.73
CDK5RAP1-202ENST00000346416 RNASE1P07998 156 aaKnown RBP10.52□□□□□ -0.73
CDK5RAP1-202ENST00000346416 RNASE3P12724 160 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms