RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 HOXA5P20719 270 aa11.24□□□□□ -0.61
ATG4B-201ENST00000344376 GNG5P63218 68 aa11.24□□□□□ -0.61
ATG4B-201ENST00000344376 Q6ZQT7 251 aa11.24□□□□□ -0.61
ATG4B-201ENST00000344376 FRAS1Q86XX4 4008 aa11.23□□□□□ -0.61
ATG4B-201ENST00000344376 H3BNG1 76 aa11.23□□□□□ -0.61
ATG4B-201ENST00000344376 AKR1C8PQ5T2L2 129 aa11.23□□□□□ -0.61
ATG4B-201ENST00000344376 TREM1Q9NP99 234 aa11.23□□□□□ -0.61
ATG4B-201ENST00000344376 TRAV8-1A0A0A6YYK1 113 aa11.22□□□□□ -0.61
ATG4B-201ENST00000344376 TRAV21A0A0B4J279 112 aa11.22□□□□□ -0.61
ATG4B-201ENST00000344376 SOHLH1Q5JUK2 328 aa11.22□□□□□ -0.61
ATG4B-201ENST00000344376 MRPL16Q9NX20 251 aaKnown RBP11.22□□□□□ -0.61
ATG4B-201ENST00000344376 NAGKQ9UJ70 344 aa11.22□□□□□ -0.61
ATG4B-201ENST00000344376 CTXND1A0A1B0GTU2 59 aa11.21□□□□□ -0.61
ATG4B-201ENST00000344376 TCRAP04437 139 aa11.21□□□□□ -0.61
ATG4B-201ENST00000344376 TMEM183BQ1AE95 376 aa11.21□□□□□ -0.61
ATG4B-201ENST00000344376 Q6ZR54 194 aa11.21□□□□□ -0.61
ATG4B-201ENST00000344376 TMEM183AQ8IXX5 376 aa11.21□□□□□ -0.61
ATG4B-201ENST00000344376 TMEM218A2RU14 115 aa11.2□□□□□ -0.62
ATG4B-201ENST00000344376 F6UZH7 168 aa11.2□□□□□ -0.62
ATG4B-201ENST00000344376 SUMO1P63165 101 aaKnown RBP11.2□□□□□ -0.62
ATG4B-201ENST00000344376 SPXQ9BT56 116 aa11.2□□□□□ -0.62
ATG4B-201ENST00000344376 TDRG1Q3Y452 100 aa11.2□□□□□ -0.62
ATG4B-201ENST00000344376 C10orf91Q5T1B1 145 aa11.2□□□□□ -0.62
ATG4B-201ENST00000344376 SSX7Q7RTT5 188 aa11.2□□□□□ -0.62
ATG4B-201ENST00000344376 ZNRF2Q8NHG8 242 aa11.2□□□□□ -0.62
ATG4B-201ENST00000344376 SMDT1Q9H4I9 107 aa11.2□□□□□ -0.62
ATG4B-201ENST00000344376 MDFICQ9P1T7 246 aa11.2□□□□□ -0.62
ATG4B-201ENST00000344376 LINC00588Q9Y4M8 146 aa11.2□□□□□ -0.62
ATG4B-201ENST00000344376 A0A1W2PRE2 83 aa11.19□□□□□ -0.62
ATG4B-201ENST00000344376 FBLL1A6NHQ2 334 aaKnown RBP11.19□□□□□ -0.62
ATG4B-201ENST00000344376 GGTLC3B5MD39 225 aa11.19□□□□□ -0.62
ATG4B-201ENST00000344376 H2AFB1P0C5Y9 115 aa11.19□□□□□ -0.62
ATG4B-201ENST00000344376 SLAQ13239 276 aa11.19□□□□□ -0.62
ATG4B-201ENST00000344376 ATRAIDQ6UW56 229 aa11.19□□□□□ -0.62
ATG4B-201ENST00000344376 CYB561D1Q8N8Q1 229 aa11.19□□□□□ -0.62
ATG4B-201ENST00000344376 KCNS1Q96KK3 526 aa11.19□□□□□ -0.62
ATG4B-201ENST00000344376 SGK494Q96LW2 274 aa11.19□□□□□ -0.62
ATG4B-201ENST00000344376 SDF2L1Q9HCN8 221 aa11.19□□□□□ -0.62
ATG4B-201ENST00000344376 EPDR1Q9UM22 224 aa11.19□□□□□ -0.62
ATG4B-201ENST00000344376 CARHSP1Q9Y2V2 147 aaKnown RBP11.19□□□□□ -0.62
ATG4B-201ENST00000344376 IGHV3-53P01767 116 aa11.18□□□□□ -0.62
ATG4B-201ENST00000344376 APOC3P02656 99 aa11.18□□□□□ -0.62
ATG4B-201ENST00000344376 ZNF726P1Q15940 193 aa11.18□□□□□ -0.62
ATG4B-201ENST00000344376 C1orf134Q5TEV5 83 aa11.18□□□□□ -0.62
ATG4B-201ENST00000344376 CLRN3Q8NCR9 226 aa11.18□□□□□ -0.62
ATG4B-201ENST00000344376 TVP23CQ96ET8 276 aa11.18□□□□□ -0.62
ATG4B-201ENST00000344376 SEC11CQ9BY50 192 aa11.18□□□□□ -0.62
ATG4B-201ENST00000344376 PSG8Q9UQ74 426 aa11.18□□□□□ -0.62
ATG4B-201ENST00000344376 PRSS29PA6NIE9 313 aa11.17□□□□□ -0.62
ATG4B-201ENST00000344376 RTL8CO15255 209 aa11.17□□□□□ -0.62
ATG4B-201ENST00000344376 FLI1Q01543 452 aaPredicted RBP11.17□□□□□ -0.62
ATG4B-201ENST00000344376 TMEM75Q8N9X5 138 aa11.17□□□□□ -0.62
ATG4B-201ENST00000344376 NKX6-2Q9C056 277 aaPredicted RBP11.17□□□□□ -0.62
ATG4B-201ENST00000344376 HECTD4Q9Y4D8 3996 aa11.17□□□□□ -0.62
ATG4B-201ENST00000344376 TRAV1-1A0A0B4J248 108 aa11.16□□□□□ -0.62
ATG4B-201ENST00000344376 NBDYA0A0U1RRE5 68 aa11.16□□□□□ -0.62
ATG4B-201ENST00000344376 PAX4O43316 350 aa11.16□□□□□ -0.62
ATG4B-201ENST00000344376 PPT1P50897 306 aa11.16□□□□□ -0.62
ATG4B-201ENST00000344376 PEA15Q15121 130 aa11.16□□□□□ -0.62
ATG4B-201ENST00000344376 PRNTQ86SH4 94 aa11.16□□□□□ -0.62
ATG4B-201ENST00000344376 FAM213BQ8TBF2 198 aa11.16□□□□□ -0.62
ATG4B-201ENST00000344376 VSIG2Q96IQ7 327 aa11.16□□□□□ -0.62
ATG4B-201ENST00000344376 PRO0255Q9UI72 69 aa11.16□□□□□ -0.62
ATG4B-201ENST00000344376 TRGV4A0A0C4DH28 118 aa11.16□□□□□ -0.62
ATG4B-201ENST00000344376 MAP1LC3B2A6NCE7 125 aa11.16□□□□□ -0.62
ATG4B-201ENST00000344376 UBE2G2P60604 165 aa11.16□□□□□ -0.62
ATG4B-201ENST00000344376 SAPCD1Q5SSQ6 148 aa11.16□□□□□ -0.62
ATG4B-201ENST00000344376 SVBPQ8N300 66 aa11.16□□□□□ -0.62
ATG4B-201ENST00000344376 RASL10AQ92737 203 aa11.16□□□□□ -0.62
ATG4B-201ENST00000344376 MAP1LC3BQ9GZQ8 125 aa11.16□□□□□ -0.62
ATG4B-201ENST00000344376 ICOSQ9Y6W8 199 aa11.16□□□□□ -0.62
ATG4B-201ENST00000344376 NACAE9PAV3 2078 aa11.15□□□□□ -0.62
ATG4B-201ENST00000344376 A0A096LPF7 62 aa11.15□□□□□ -0.62
ATG4B-201ENST00000344376 IGHV3-16A0A0C4DH30 117 aa11.15□□□□□ -0.62
ATG4B-201ENST00000344376 GNRH2O43555 120 aa11.15□□□□□ -0.62
ATG4B-201ENST00000344376 GCGP01275 180 aa11.15□□□□□ -0.62
ATG4B-201ENST00000344376 TYMSP04818 313 aa11.15□□□□□ -0.62
ATG4B-201ENST00000344376 FGF8P55075 233 aaPredicted RBP11.15□□□□□ -0.62
ATG4B-201ENST00000344376 HHLA3Q9XRX5 114 aa11.15□□□□□ -0.62
ATG4B-201ENST00000344376 MRPS16Q9Y3D3 137 aaKnown RBP11.15□□□□□ -0.62
ATG4B-201ENST00000344376 M0R2P5 195 aa11.14□□□□□ -0.63
ATG4B-201ENST00000344376 IGLV2-11P01706 119 aa11.14□□□□□ -0.63
ATG4B-201ENST00000344376 PFN1P07737 140 aaKnown RBP11.14□□□□□ -0.63
ATG4B-201ENST00000344376 FHITP49789 147 aa11.14□□□□□ -0.63
ATG4B-201ENST00000344376 ESRGQ1W209 222 aa11.14□□□□□ -0.63
ATG4B-201ENST00000344376 TTC32Q5I0X7 151 aa11.14□□□□□ -0.63
ATG4B-201ENST00000344376 C8orf49Q96NF6 230 aa11.14□□□□□ -0.63
ATG4B-201ENST00000344376 UPK3BQ9BT76 320 aa11.14□□□□□ -0.63
ATG4B-201ENST00000344376 Q9H8V8 135 aa11.14□□□□□ -0.63
ATG4B-201ENST00000344376 FAM74A7A6NL05 159 aa11.13□□□□□ -0.63
ATG4B-201ENST00000344376 F8W036 122 aa11.13□□□□□ -0.63
ATG4B-201ENST00000344376 PEX7O00628 323 aa11.13□□□□□ -0.63
ATG4B-201ENST00000344376 CRYBA4P53673 196 aa11.13□□□□□ -0.63
ATG4B-201ENST00000344376 FHL2Q14192 279 aa11.13□□□□□ -0.63
ATG4B-201ENST00000344376 FAM74A3Q4VXF1 159 aa11.13□□□□□ -0.63
ATG4B-201ENST00000344376 HIST1H2BAQ96A08 127 aa11.13□□□□□ -0.63
ATG4B-201ENST00000344376 TRAV4A0A0B4J268 109 aa11.12□□□□□ -0.63
ATG4B-201ENST00000344376 ADCYAP1P18509 176 aa11.12□□□□□ -0.63
ATG4B-201ENST00000344376 SRSF3P84103 164 aaKnown RBP11.12□□□□□ -0.63
ATG4B-201ENST00000344376 MBD3L1Q8WWY6 194 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms