RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 TDRG1Q3Y452 100 aa12.67□□□□□ -0.38
USF2-202ENST00000343550 SAPCD1Q5SSQ6 148 aa12.67□□□□□ -0.38
USF2-202ENST00000343550 Q6ZTI0 123 aa12.67□□□□□ -0.38
USF2-202ENST00000343550 TRAV1-1A0A0B4J248 108 aa12.67□□□□□ -0.38
USF2-202ENST00000343550 CCL20P78556 96 aa12.67□□□□□ -0.38
USF2-202ENST00000343550 MDFICQ9P1T7 246 aa12.67□□□□□ -0.38
USF2-202ENST00000343550 F5H768 121 aa12.66□□□□□ -0.38
USF2-202ENST00000343550 SPINK4O60575 86 aa12.66□□□□□ -0.38
USF2-202ENST00000343550 PPT1P50897 306 aa12.66□□□□□ -0.38
USF2-202ENST00000343550 SMUG1Q53HV7 270 aa12.66□□□□□ -0.38
USF2-202ENST00000343550 TCEAL7Q9BRU2 100 aa12.66□□□□□ -0.38
USF2-202ENST00000343550 GNRH2O43555 120 aa12.65□□□□□ -0.38
USF2-202ENST00000343550 GCGP01275 180 aa12.65□□□□□ -0.38
USF2-202ENST00000343550 TMEM183BQ1AE95 376 aa12.65□□□□□ -0.38
USF2-202ENST00000343550 TMEM88Q6PEY1 159 aa12.65□□□□□ -0.38
USF2-202ENST00000343550 TMEM183AQ8IXX5 376 aa12.65□□□□□ -0.38
USF2-202ENST00000343550 NAGKQ9UJ70 344 aa12.65□□□□□ -0.38
USF2-202ENST00000343550 C18orf15Q96N68 181 aa12.64□□□□□ -0.39
USF2-202ENST00000343550 TRGV11A0A075B6L2 103 aa12.63□□□□□ -0.39
USF2-202ENST00000343550 TRGV1A0A0A0MS02 117 aa12.63□□□□□ -0.39
USF2-202ENST00000343550 M0R2N4 97 aa12.63□□□□□ -0.39
USF2-202ENST00000343550 PFN1P07737 140 aaKnown RBP12.63□□□□□ -0.39
USF2-202ENST00000343550 NKX2-5P52952 324 aaPredicted RBP12.63□□□□□ -0.39
USF2-202ENST00000343550 ZNF415Q09FC8 603 aa12.63□□□□□ -0.39
USF2-202ENST00000343550 LGALS9BQ3B8N2 356 aa12.63□□□□□ -0.39
USF2-202ENST00000343550 C11orf21Q9P2W6 132 aa12.63□□□□□ -0.39
USF2-202ENST00000343550 A0A1B0GVY2 172 aa12.62□□□□□ -0.39
USF2-202ENST00000343550 Q86TA4 180 aa12.62□□□□□ -0.39
USF2-202ENST00000343550 FMC1Q96HJ9 113 aa12.62□□□□□ -0.39
USF2-202ENST00000343550 KCNS1Q96KK3 526 aa12.62□□□□□ -0.39
USF2-202ENST00000343550 ZFP30Q9Y2G7 519 aa12.62□□□□□ -0.39
USF2-202ENST00000343550 TRGV2A0A075B6R0 118 aa12.62□□□□□ -0.39
USF2-202ENST00000343550 IGHV3-16A0A0C4DH30 117 aa12.62□□□□□ -0.39
USF2-202ENST00000343550 TRBV6-1A0A0K0K1D8 114 aa12.62□□□□□ -0.39
USF2-202ENST00000343550 TEX46H3BTG2 121 aa12.62□□□□□ -0.39
USF2-202ENST00000343550 SPXQ9BT56 116 aa12.62□□□□□ -0.39
USF2-202ENST00000343550 SDF2L1Q9HCN8 221 aa12.62□□□□□ -0.39
USF2-202ENST00000343550 PRSS29PA6NIE9 313 aa12.61□□□□□ -0.39
USF2-202ENST00000343550 FABP5P3A8MUU1 101 aa12.61□□□□□ -0.39
USF2-202ENST00000343550 RTL8CO15255 209 aa12.61□□□□□ -0.39
USF2-202ENST00000343550 TYMSP04818 313 aa12.61□□□□□ -0.39
USF2-202ENST00000343550 HOXA5P20719 270 aa12.61□□□□□ -0.39
USF2-202ENST00000343550 UBE2G1P62253 170 aa12.61□□□□□ -0.39
USF2-202ENST00000343550 OR5I1Q13606 314 aa12.61□□□□□ -0.39
USF2-202ENST00000343550 COX8CQ7Z4L0 72 aa12.61□□□□□ -0.39
USF2-202ENST00000343550 UBE2DNLQ8IWF7 75 aa12.61□□□□□ -0.39
USF2-202ENST00000343550 MRPL16Q9NX20 251 aaKnown RBP12.61□□□□□ -0.39
USF2-202ENST00000343550 GNG13Q9P2W3 67 aa12.61□□□□□ -0.39
USF2-202ENST00000343550 FAT2Q9NYQ8 4349 aa12.61□□□□□ -0.39
USF2-202ENST00000343550 KIAA1109Q2LD37 5005 aa12.6□□□□□ -0.39
USF2-202ENST00000343550 MANBALQ9NQG1 85 aa12.6□□□□□ -0.39
USF2-202ENST00000343550 DNAH2Q9P225 4427 aa12.6□□□□□ -0.39
USF2-202ENST00000343550 SCO2A0A1W2PP80 73 aa12.59□□□□□ -0.39
USF2-202ENST00000343550 LTAP01374 205 aa12.59□□□□□ -0.39
USF2-202ENST00000343550 AKR1C3P42330 323 aa12.59□□□□□ -0.39
USF2-202ENST00000343550 CRIP1P50238 77 aa12.59□□□□□ -0.39
USF2-202ENST00000343550 C15orf53Q8NAA6 179 aa12.59□□□□□ -0.39
USF2-202ENST00000343550 RASL10AQ92737 203 aa12.59□□□□□ -0.39
USF2-202ENST00000343550 IGLV2-18A0A075B6J9 118 aa12.58□□□□□ -0.4
USF2-202ENST00000343550 S100A9P06702 114 aaKnown RBP12.58□□□□□ -0.4
USF2-202ENST00000343550 ALKAL2Q6UX46 152 aa12.58□□□□□ -0.4
USF2-202ENST00000343550 ZC2HC1AQ96GY0 325 aa12.58□□□□□ -0.4
USF2-202ENST00000343550 IGKV3D-20A0A0C4DH25 116 aa12.57□□□□□ -0.4
USF2-202ENST00000343550 RNF212Q495C1 297 aa12.57□□□□□ -0.4
USF2-202ENST00000343550 TRAV26-1A0A087WT03 109 aa12.57□□□□□ -0.4
USF2-202ENST00000343550 Q6ZR54 194 aa12.57□□□□□ -0.4
USF2-202ENST00000343550 TXNDC17Q9BRA2 123 aa12.57□□□□□ -0.4
USF2-202ENST00000343550 M0R2P5 195 aa12.56□□□□□ -0.4
USF2-202ENST00000343550 NUDT3O95989 172 aa12.56□□□□□ -0.4
USF2-202ENST00000343550 PKHD1P08F94 4074 aa12.56□□□□□ -0.4
USF2-202ENST00000343550 A0A0J9YY99 117 aa12.55□□□□□ -0.4
USF2-202ENST00000343550 ZNF674Q2M3X9 581 aa12.55□□□□□ -0.4
USF2-202ENST00000343550 MLST8Q9BVC4 326 aa12.55□□□□□ -0.4
USF2-202ENST00000343550 PCLOQ9Y6V0 5065 aa12.54□□□□□ -0.4
USF2-202ENST00000343550 MUC4Q99102 2169 aa12.54□□□□□ -0.4
USF2-202ENST00000343550 H3BNG1 76 aa12.54□□□□□ -0.4
USF2-202ENST00000343550 SH2D1AO60880 128 aa12.54□□□□□ -0.4
USF2-202ENST00000343550 IGHV3-53P01767 116 aa12.54□□□□□ -0.4
USF2-202ENST00000343550 ORM1P02763 201 aa12.54□□□□□ -0.4
USF2-202ENST00000343550 MED14OSP0DP75 135 aa12.54□□□□□ -0.4
USF2-202ENST00000343550 RNASE3P12724 160 aaKnown RBP12.54□□□□□ -0.4
USF2-202ENST00000343550 BLOC1S1P78537 153 aa12.54□□□□□ -0.4
USF2-202ENST00000343550 FAM162BQ5T6X4 162 aa12.54□□□□□ -0.4
USF2-202ENST00000343550 BAGE2Q86Y30 109 aa12.54□□□□□ -0.4
USF2-202ENST00000343550 C11orf52Q96A22 123 aa12.54□□□□□ -0.4
USF2-202ENST00000343550 C9orf85Q96MD7 179 aa12.54□□□□□ -0.4
USF2-202ENST00000343550 IFNA1P01562 189 aa12.53□□□□□ -0.4
USF2-202ENST00000343550 MEF2BQ02080 365 aaPredicted RBP12.53□□□□□ -0.4
USF2-202ENST00000343550 FHL2Q14192 279 aa12.53□□□□□ -0.4
USF2-202ENST00000343550 ZNF575Q86XF7 245 aa12.53□□□□□ -0.4
USF2-202ENST00000343550 NHLRC2Q8NBF2 726 aa12.53□□□□□ -0.4
USF2-202ENST00000343550 VSIG2Q96IQ7 327 aa12.53□□□□□ -0.4
USF2-202ENST00000343550 DNAH17Q9UFH2 4485 aa12.53□□□□□ -0.4
USF2-202ENST00000343550 B4DEV8 164 aa12.52□□□□□ -0.4
USF2-202ENST00000343550 KRBOX1C9JBD0 128 aa12.52□□□□□ -0.4
USF2-202ENST00000343550 RPL35P42766 123 aaKnown RBP12.52□□□□□ -0.4
USF2-202ENST00000343550 LYPD6BQ8NI32 183 aa12.52□□□□□ -0.4
USF2-202ENST00000343550 ZNF479Q96JC4 524 aa12.52□□□□□ -0.4
USF2-202ENST00000343550 DERL1Q9BUN8 251 aa12.52□□□□□ -0.4
USF2-202ENST00000343550 VAX2Q9UIW0 290 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms