RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 A0A087WWL8 130 aa3.76□□□□□ -1.81
CSMD3-203ENST00000343508 CARD19Q96LW7 228 aa3.76□□□□□ -1.81
CSMD3-203ENST00000343508 PRIMA1Q86XR5 153 aa3.75□□□□□ -1.81
CSMD3-203ENST00000343508 RHPN1-AS1Q9BWJ2 59 aa3.75□□□□□ -1.81
CSMD3-203ENST00000343508 COLQQ9Y215 455 aaPredicted RBP3.75□□□□□ -1.81
CSMD3-203ENST00000343508 ATP6V0E1O15342 81 aa3.75□□□□□ -1.81
CSMD3-203ENST00000343508 LINC00574Q9H8X3 128 aa3.75□□□□□ -1.81
CSMD3-203ENST00000343508 GATD1Q8NB37 220 aa3.75□□□□□ -1.81
CSMD3-203ENST00000343508 C11orf86A6NJI1 115 aa3.75□□□□□ -1.81
CSMD3-203ENST00000343508 PRSS47A8MTI9 375 aa3.75□□□□□ -1.81
CSMD3-203ENST00000343508 RHOHQ15669 191 aa3.75□□□□□ -1.81
CSMD3-203ENST00000343508 C2orf91Q6ZV80 131 aa3.75□□□□□ -1.81
CSMD3-203ENST00000343508 C7orf69Q9H7B7 122 aa3.75□□□□□ -1.81
CSMD3-203ENST00000343508 ADAMTS20P59510 1910 aa3.75□□□□□ -1.81
CSMD3-203ENST00000343508 IGKV3OR2-268A0A0C4DH90 116 aa3.75□□□□□ -1.81
CSMD3-203ENST00000343508 IGLV2-23P01705 113 aa3.75□□□□□ -1.81
CSMD3-203ENST00000343508 TRACP01848 142 aa3.75□□□□□ -1.81
CSMD3-203ENST00000343508 MBD6Q96DN6 1003 aa3.75□□□□□ -1.81
CSMD3-203ENST00000343508 SS18L2Q9UHA2 77 aa3.75□□□□□ -1.81
CSMD3-203ENST00000343508 IGLV11-55A0A075B6I3 123 aa3.75□□□□□ -1.81
CSMD3-203ENST00000343508 COL8A2P25067 703 aa3.75□□□□□ -1.81
CSMD3-203ENST00000343508 ANXA2RQ3ZCQ2 193 aa3.75□□□□□ -1.81
CSMD3-203ENST00000343508 GDF5OSQ5U4N7 250 aa3.75□□□□□ -1.81
CSMD3-203ENST00000343508 C1orf122Q6ZSJ8 110 aa3.75□□□□□ -1.81
CSMD3-203ENST00000343508 C15orf53Q8NAA6 179 aa3.75□□□□□ -1.81
CSMD3-203ENST00000343508 WFDC12Q8WWY7 111 aa3.75□□□□□ -1.81
CSMD3-203ENST00000343508 NDUFA4O00483 81 aa3.75□□□□□ -1.81
CSMD3-203ENST00000343508 ATP5G1P05496 136 aa3.75□□□□□ -1.81
CSMD3-203ENST00000343508 SPATA25Q9BR10 227 aa3.75□□□□□ -1.81
CSMD3-203ENST00000343508 GTF3C1Q12789 2109 aa3.75□□□□□ -1.81
CSMD3-203ENST00000343508 TRAV26-1A0A087WT03 109 aa3.75□□□□□ -1.81
CSMD3-203ENST00000343508 E7EQL1 145 aa3.75□□□□□ -1.81
CSMD3-203ENST00000343508 C9orf47Q6ZRZ4 202 aa3.74□□□□□ -1.81
CSMD3-203ENST00000343508 RANBP2P49792 3224 aaKnown RBP3.74□□□□□ -1.81
CSMD3-203ENST00000343508 SOCS3O14543 225 aa3.74□□□□□ -1.81
CSMD3-203ENST00000343508 TEX22C9J3V5 150 aa3.74□□□□□ -1.81
CSMD3-203ENST00000343508 RHODO00212 210 aa3.74□□□□□ -1.81
CSMD3-203ENST00000343508 ATP5J2P56134 94 aa3.74□□□□□ -1.81
CSMD3-203ENST00000343508 SPRNQ5BIV9 151 aa3.74□□□□□ -1.81
CSMD3-203ENST00000343508 U3KQK5 164 aa3.74□□□□□ -1.81
CSMD3-203ENST00000343508 IGHV3OR16-10A0A075B7F0 116 aa3.74□□□□□ -1.81
CSMD3-203ENST00000343508 K7EIM0 57 aa3.74□□□□□ -1.81
CSMD3-203ENST00000343508 HERVK_113P63121 156 aa3.74□□□□□ -1.81
CSMD3-203ENST00000343508 NDUFA11Q86Y39 141 aa3.74□□□□□ -1.81
CSMD3-203ENST00000343508 NTN5Q8WTR8 489 aaPredicted RBP3.74□□□□□ -1.81
CSMD3-203ENST00000343508 MED14OSP0DP75 135 aa3.74□□□□□ -1.81
CSMD3-203ENST00000343508 LINC00158P58513 81 aa3.74□□□□□ -1.81
CSMD3-203ENST00000343508 IGKV1D-37A0A075B6S9 117 aa3.74□□□□□ -1.81
CSMD3-203ENST00000343508 SP5Q6BEB4 398 aaPredicted RBP3.74□□□□□ -1.81
CSMD3-203ENST00000343508 LINC00322Q6ZN03 302 aaPredicted RBP3.74□□□□□ -1.81
CSMD3-203ENST00000343508 SPAG8Q99932 426 aaPredicted RBP3.74□□□□□ -1.81
CSMD3-203ENST00000343508 IGHV3-73A0A0B4J1V6 119 aa3.74□□□□□ -1.81
CSMD3-203ENST00000343508 TRAV13-2A0A0B4J235 113 aa3.74□□□□□ -1.81
CSMD3-203ENST00000343508 IGFL2Q6UWQ7 119 aa3.74□□□□□ -1.81
CSMD3-203ENST00000343508 Q6ZUT4 128 aa3.74□□□□□ -1.81
CSMD3-203ENST00000343508 TMEM219Q86XT9 240 aa3.74□□□□□ -1.81
CSMD3-203ENST00000343508 Q8N7P7 452 aa3.74□□□□□ -1.81
CSMD3-203ENST00000343508 USF3Q68DE3 2245 aa3.74□□□□□ -1.81
CSMD3-203ENST00000343508 CFAP161Q6P656 301 aa3.73□□□□□ -1.81
CSMD3-203ENST00000343508 BUB3O43684 328 aa3.73□□□□□ -1.81
CSMD3-203ENST00000343508 IGKV1-17P01599 117 aa3.73□□□□□ -1.81
CSMD3-203ENST00000343508 Q8N976 141 aa3.73□□□□□ -1.81
CSMD3-203ENST00000343508 DEFB104AQ8WTQ1 72 aa3.73□□□□□ -1.81
CSMD3-203ENST00000343508 RITA1Q96K30 269 aa3.73□□□□□ -1.81
CSMD3-203ENST00000343508 NDUFA12Q9UI09 145 aa3.73□□□□□ -1.81
CSMD3-203ENST00000343508 CRYGCP07315 174 aa3.73□□□□□ -1.81
CSMD3-203ENST00000343508 CITED1Q99966 193 aa3.73□□□□□ -1.81
CSMD3-203ENST00000343508 SPANXB1Q9NS25 103 aaPredicted RBP3.73□□□□□ -1.81
CSMD3-203ENST00000343508 TET2Q6N021 2002 aaPredicted RBP3.73□□□□□ -1.81
CSMD3-203ENST00000343508 A0A0U1RRA0 63 aa3.73□□□□□ -1.81
CSMD3-203ENST00000343508 PROP1O75360 226 aa3.73□□□□□ -1.81
CSMD3-203ENST00000343508 TIMM17AQ99595 171 aa3.73□□□□□ -1.81
CSMD3-203ENST00000343508 MYCNOSP40205 109 aa3.73□□□□□ -1.81
CSMD3-203ENST00000343508 ICOSQ9Y6W8 199 aa3.73□□□□□ -1.81
CSMD3-203ENST00000343508 AGPAT4-IT1Q9H0P7 198 aa3.73□□□□□ -1.81
CSMD3-203ENST00000343508 PAX4O43316 350 aa3.73□□□□□ -1.81
CSMD3-203ENST00000343508 VCANP13611 3396 aa3.73□□□□□ -1.81
CSMD3-203ENST00000343508 HERV-K104P63124 156 aa3.73□□□□□ -1.81
CSMD3-203ENST00000343508 C6orf226Q5I0X4 101 aa3.73□□□□□ -1.81
CSMD3-203ENST00000343508 A4D1N5 150 aa3.73□□□□□ -1.81
CSMD3-203ENST00000343508 FOXE3Q13461 319 aa3.73□□□□□ -1.81
CSMD3-203ENST00000343508 UBL5Q9BZL1 73 aa3.73□□□□□ -1.81
CSMD3-203ENST00000343508 A0A0B4J2C4 111 aa3.72□□□□□ -1.81
CSMD3-203ENST00000343508 PHLDA1Q8WV24 401 aaPredicted RBP3.72□□□□□ -1.81
CSMD3-203ENST00000343508 INSP01308 110 aa3.72□□□□□ -1.81
CSMD3-203ENST00000343508 CTSZQ9UBR2 303 aa3.72□□□□□ -1.81
CSMD3-203ENST00000343508 H3BUA1 57 aa3.72□□□□□ -1.81
CSMD3-203ENST00000343508 IGHV1-69P01742 117 aa3.72□□□□□ -1.81
CSMD3-203ENST00000343508 GATA1P15976 413 aaPredicted RBP3.72□□□□□ -1.81
CSMD3-203ENST00000343508 INTS1Q8N201 2190 aaKnown RBP3.72□□□□□ -1.81
CSMD3-203ENST00000343508 TRBV10-2A0A0K0K1G8 114 aa3.72□□□□□ -1.81
CSMD3-203ENST00000343508 H3BT86 120 aa3.72□□□□□ -1.81
CSMD3-203ENST00000343508 Q71RC1 249 aaPredicted RBP3.72□□□□□ -1.81
CSMD3-203ENST00000343508 KLHL30-AS1Q8NEE0 82 aa3.72□□□□□ -1.81
CSMD3-203ENST00000343508 IGHV1OR15-1A0A075B7D0 117 aa3.72□□□□□ -1.81
CSMD3-203ENST00000343508 WT1P19544 449 aaPredicted RBP3.72□□□□□ -1.81
CSMD3-203ENST00000343508 ZFP2Q6ZN57 461 aa3.72□□□□□ -1.81
CSMD3-203ENST00000343508 LINC00527Q9UJ94 153 aa3.72□□□□□ -1.81
CSMD3-203ENST00000343508 RNF114Q9Y508 228 aa3.72□□□□□ -1.81
CSMD3-203ENST00000343508 CMC4P56277 68 aaPredicted RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms