RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 EDA2RQ9HAV5 297 aa6.36□□□□□ -1.39
UBE4B-202ENST00000343090 KIAA1549LQ6ZVL6 1849 aa6.36□□□□□ -1.39
UBE4B-202ENST00000343090 MYMXA0A1B0GTQ4 84 aa6.36□□□□□ -1.39
UBE4B-202ENST00000343090 ZNF415Q09FC8 603 aa6.36□□□□□ -1.39
UBE4B-202ENST00000343090 TAL2Q16559 108 aa6.36□□□□□ -1.39
UBE4B-202ENST00000343090 C2orf66Q6UXQ4 117 aa6.36□□□□□ -1.39
UBE4B-202ENST00000343090 LTAP01374 205 aa6.35□□□□□ -1.39
UBE4B-202ENST00000343090 HERV-K104P63124 156 aa6.35□□□□□ -1.39
UBE4B-202ENST00000343090 TMEM86BQ8N661 226 aa6.35□□□□□ -1.39
UBE4B-202ENST00000343090 OBSL1O75147 1896 aa6.35□□□□□ -1.39
UBE4B-202ENST00000343090 Q8N8P6 123 aa6.35□□□□□ -1.39
UBE4B-202ENST00000343090 MRPL35Q9NZE8 188 aaKnown RBP6.35□□□□□ -1.39
UBE4B-202ENST00000343090 TRBV25-1A0A075B6N4 114 aa6.35□□□□□ -1.39
UBE4B-202ENST00000343090 ZNF625Q96I27 306 aaPredicted RBP6.35□□□□□ -1.39
UBE4B-202ENST00000343090 TTTY13Q9BZ97 58 aa6.35□□□□□ -1.39
UBE4B-202ENST00000343090 PCDH15Q96QU1 1955 aa6.35□□□□□ -1.39
UBE4B-202ENST00000343090 NCOA6Q14686 2063 aaPredicted RBP6.35□□□□□ -1.39
UBE4B-202ENST00000343090 SLC25A16P16260 332 aa6.35□□□□□ -1.39
UBE4B-202ENST00000343090 LINC00310P59036 64 aa6.35□□□□□ -1.39
UBE4B-202ENST00000343090 PLEKHB2Q96CS7 222 aa6.35□□□□□ -1.39
UBE4B-202ENST00000343090 F6UB75 175 aa6.34□□□□□ -1.39
UBE4B-202ENST00000343090 FOXI1Q12951 378 aa6.34□□□□□ -1.39
UBE4B-202ENST00000343090 Q6ZPA2 131 aa6.34□□□□□ -1.39
UBE4B-202ENST00000343090 LINC01356Q8N9X3 169 aa6.34□□□□□ -1.39
UBE4B-202ENST00000343090 XCL2Q9UBD3 114 aa6.34□□□□□ -1.39
UBE4B-202ENST00000343090 RPL36AP83881 106 aaKnown RBP6.34□□□□□ -1.39
UBE4B-202ENST00000343090 PATE2Q6UY27 113 aa6.34□□□□□ -1.39
UBE4B-202ENST00000343090 DYNAPQ8N1N2 210 aa6.34□□□□□ -1.39
UBE4B-202ENST00000343090 RPL36ALQ969Q0 106 aaKnown RBP6.34□□□□□ -1.39
UBE4B-202ENST00000343090 KAAG1Q9UBP8 84 aa6.34□□□□□ -1.39
UBE4B-202ENST00000343090 CFHR3Q02985 330 aa6.34□□□□□ -1.39
UBE4B-202ENST00000343090 Q8N976 141 aa6.34□□□□□ -1.39
UBE4B-202ENST00000343090 OR11H6Q8NGC7 330 aa6.34□□□□□ -1.39
UBE4B-202ENST00000343090 KMT2EQ8IZD2 1858 aa6.34□□□□□ -1.39
UBE4B-202ENST00000343090 PCNX3Q9H6A9 2034 aa6.34□□□□□ -1.39
UBE4B-202ENST00000343090 H3BMM0 161 aa6.34□□□□□ -1.39
UBE4B-202ENST00000343090 UBE2WQ96B02 151 aa6.34□□□□□ -1.39
UBE4B-202ENST00000343090 C20orf78Q9BR46 151 aa6.34□□□□□ -1.39
UBE4B-202ENST00000343090 PRADC1Q9BSG0 188 aa6.34□□□□□ -1.39
UBE4B-202ENST00000343090 TIMM21Q9BVV7 248 aa6.34□□□□□ -1.39
UBE4B-202ENST00000343090 PSCAO43653 123 aa6.34□□□□□ -1.4
UBE4B-202ENST00000343090 EGR2P11161 476 aaPredicted RBP6.34□□□□□ -1.4
UBE4B-202ENST00000343090 MSMPQ1L6U9 139 aa6.34□□□□□ -1.4
UBE4B-202ENST00000343090 EML6Q6ZMW3 1958 aa6.33□□□□□ -1.4
UBE4B-202ENST00000343090 INSP01308 110 aa6.33□□□□□ -1.4
UBE4B-202ENST00000343090 HLA-DRB4P13762 266 aa6.33□□□□□ -1.4
UBE4B-202ENST00000343090 GATA1P15976 413 aaPredicted RBP6.33□□□□□ -1.4
UBE4B-202ENST00000343090 HLA-DRB4X5D2U9 266 aa6.33□□□□□ -1.4
UBE4B-202ENST00000343090 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.33□□□□□ -1.4
UBE4B-202ENST00000343090 IGHV3-38A0A0C4DH36 116 aa6.33□□□□□ -1.4
UBE4B-202ENST00000343090 E7EUB6 86 aa6.33□□□□□ -1.4
UBE4B-202ENST00000343090 TCF15Q12870 199 aa6.33□□□□□ -1.4
UBE4B-202ENST00000343090 GDF5OSQ5U4N7 250 aa6.33□□□□□ -1.4
UBE4B-202ENST00000343090 MORN3Q6PF18 240 aaPredicted RBP6.33□□□□□ -1.4
UBE4B-202ENST00000343090 C15orf53Q8NAA6 179 aa6.33□□□□□ -1.4
UBE4B-202ENST00000343090 A0A087WX48 190 aa6.33□□□□□ -1.4
UBE4B-202ENST00000343090 FOXE3Q13461 319 aa6.33□□□□□ -1.4
UBE4B-202ENST00000343090 DEFB121Q5J5C9 76 aa6.33□□□□□ -1.4
UBE4B-202ENST00000343090 S100A7L2Q5SY68 101 aa6.33□□□□□ -1.4
UBE4B-202ENST00000343090 SEM1Q6ZVN7 128 aa6.33□□□□□ -1.4
UBE4B-202ENST00000343090 ADAMTS9Q9P2N4 1935 aa6.33□□□□□ -1.4
UBE4B-202ENST00000343090 F8WEM9 126 aa6.33□□□□□ -1.4
UBE4B-202ENST00000343090 HOXB4P17483 251 aaPredicted RBP6.33□□□□□ -1.4
UBE4B-202ENST00000343090 GATD1Q8NB37 220 aa6.33□□□□□ -1.4
UBE4B-202ENST00000343090 SPANXB1Q9NS25 103 aaPredicted RBP6.33□□□□□ -1.4
UBE4B-202ENST00000343090 DYSFO75923 2080 aa6.32□□□□□ -1.4
UBE4B-202ENST00000343090 IGKV1OR2-108A0A075B7D4 117 aa6.32□□□□□ -1.4
UBE4B-202ENST00000343090 SDHAF1A6NFY7 115 aa6.32□□□□□ -1.4
UBE4B-202ENST00000343090 PAX4O43316 350 aa6.32□□□□□ -1.4
UBE4B-202ENST00000343090 MT-ATP8P03928 68 aa6.32□□□□□ -1.4
UBE4B-202ENST00000343090 DEFB130BP0DP73 79 aa6.32□□□□□ -1.4
UBE4B-202ENST00000343090 DEFB130AP0DP74 79 aa6.32□□□□□ -1.4
UBE4B-202ENST00000343090 CRIP3Q6Q6R5 217 aa6.32□□□□□ -1.4
UBE4B-202ENST00000343090 GTSF1Q8WW33 167 aa6.32□□□□□ -1.4
UBE4B-202ENST00000343090 CFHR4Q92496 578 aa6.32□□□□□ -1.4
UBE4B-202ENST00000343090 TRAV8-3A0A0A6YYJ7 113 aa6.32□□□□□ -1.4
UBE4B-202ENST00000343090 UTF1Q5T230 341 aa6.32□□□□□ -1.4
UBE4B-202ENST00000343090 IGFL2Q6UWQ7 119 aa6.32□□□□□ -1.4
UBE4B-202ENST00000343090 TRPT1Q86TN4 253 aaKnown RBP6.32□□□□□ -1.4
UBE4B-202ENST00000343090 GNRH2O43555 120 aa6.32□□□□□ -1.4
UBE4B-202ENST00000343090 GP9P14770 177 aa6.32□□□□□ -1.4
UBE4B-202ENST00000343090 NTN5Q8WTR8 489 aaPredicted RBP6.32□□□□□ -1.4
UBE4B-202ENST00000343090 AGPAT4-IT1Q9H0P7 198 aa6.32□□□□□ -1.4
UBE4B-202ENST00000343090 MRPL36Q9P0J6 103 aaKnown RBP6.32□□□□□ -1.4
UBE4B-202ENST00000343090 SP5Q6BEB4 398 aaPredicted RBP6.31□□□□□ -1.4
UBE4B-202ENST00000343090 LY6G5BQ8NDX9 201 aa6.31□□□□□ -1.4
UBE4B-202ENST00000343090 LTBP2Q14767 1821 aa6.31□□□□□ -1.4
UBE4B-202ENST00000343090 NDUFA4O00483 81 aa6.31□□□□□ -1.4
UBE4B-202ENST00000343090 RNASE13Q5GAN3 156 aaKnown RBP6.31□□□□□ -1.4
UBE4B-202ENST00000343090 C3orf56Q8N813 242 aa6.31□□□□□ -1.4
UBE4B-202ENST00000343090 JPT2Q9H910 190 aa6.31□□□□□ -1.4
UBE4B-202ENST00000343090 IGKV1-17P01599 117 aa6.31□□□□□ -1.4
UBE4B-202ENST00000343090 PRIMA1Q86XR5 153 aa6.31□□□□□ -1.4
UBE4B-202ENST00000343090 RASL10AQ92737 203 aa6.31□□□□□ -1.4
UBE4B-202ENST00000343090 SPRY4Q9C004 299 aa6.31□□□□□ -1.4
UBE4B-202ENST00000343090 MSRB1Q9NZV6 116 aa6.31□□□□□ -1.4
UBE4B-202ENST00000343090 I3L2K1 104 aa6.31□□□□□ -1.4
UBE4B-202ENST00000343090 K7EIM0 57 aa6.31□□□□□ -1.4
UBE4B-202ENST00000343090 Q6ZUT4 128 aa6.31□□□□□ -1.4
UBE4B-202ENST00000343090 IGHV1OR15-1A0A075B7D0 117 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms