RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 GATD1Q8NB37 220 aa12.71□□□□□ -0.37
FRMD4A-202ENST00000342409 TPPP3Q9BW30 176 aa12.71□□□□□ -0.37
FRMD4A-202ENST00000342409 TRAV21A0A0B4J279 112 aa12.71□□□□□ -0.38
FRMD4A-202ENST00000342409 MUC21A0A0G2JKD1 596 aa12.71□□□□□ -0.38
FRMD4A-202ENST00000342409 MUC21A0A140T8X8 626 aa12.71□□□□□ -0.38
FRMD4A-202ENST00000342409 RBMY1BA6NDE4 496 aaKnown RBP12.71□□□□□ -0.38
FRMD4A-202ENST00000342409 RBMY1EA6NEQ0 496 aaKnown RBP12.71□□□□□ -0.38
FRMD4A-202ENST00000342409 RBMY1DP0C7P1 496 aaKnown RBP12.71□□□□□ -0.38
FRMD4A-202ENST00000342409 ODF3L2Q3SX64 289 aa12.71□□□□□ -0.38
FRMD4A-202ENST00000342409 COA6Q5JTJ3 125 aaKnown RBP12.71□□□□□ -0.38
FRMD4A-202ENST00000342409 MUC21Q5SSG8 566 aa12.71□□□□□ -0.38
FRMD4A-202ENST00000342409 SPATA3Q8NHX4 192 aa12.71□□□□□ -0.38
FRMD4A-202ENST00000342409 CITED1Q99966 193 aa12.71□□□□□ -0.38
FRMD4A-202ENST00000342409 OR4C46A6NHA9 309 aa12.7□□□□□ -0.38
FRMD4A-202ENST00000342409 IFITM10A6NMD0 228 aa12.7□□□□□ -0.38
FRMD4A-202ENST00000342409 SAP30O75446 220 aa12.7□□□□□ -0.38
FRMD4A-202ENST00000342409 DUSP14O95147 198 aaKnown RBP12.7□□□□□ -0.38
FRMD4A-202ENST00000342409 IGLV1-51P01701 117 aa12.7□□□□□ -0.38
FRMD4A-202ENST00000342409 HLA-DRB4P13762 266 aa12.7□□□□□ -0.38
FRMD4A-202ENST00000342409 HLA-DRB4X5D2U9 266 aa12.7□□□□□ -0.38
FRMD4A-202ENST00000342409 H3BMM0 161 aa12.69□□□□□ -0.38
FRMD4A-202ENST00000342409 M0R2Z0 102 aa12.69□□□□□ -0.38
FRMD4A-202ENST00000342409 MAST4O15021 2626 aa12.69□□□□□ -0.38
FRMD4A-202ENST00000342409 APCSP02743 223 aa12.69□□□□□ -0.38
FRMD4A-202ENST00000342409 RIGQ13278 110 aa12.69□□□□□ -0.38
FRMD4A-202ENST00000342409 CNFNQ9BYD5 112 aa12.69□□□□□ -0.38
FRMD4A-202ENST00000342409 TP53TG3Q9ULZ0 132 aa12.69□□□□□ -0.38
FRMD4A-202ENST00000342409 ZNF324O75467 553 aaPredicted RBP12.68□□□□□ -0.38
FRMD4A-202ENST00000342409 LEPP41159 167 aa12.68□□□□□ -0.38
FRMD4A-202ENST00000342409 ANXA2RQ3ZCQ2 193 aa12.68□□□□□ -0.38
FRMD4A-202ENST00000342409 C7orf71A4D174 169 aa12.68□□□□□ -0.38
FRMD4A-202ENST00000342409 TRAV12-2A0A075B6T6 113 aa12.67□□□□□ -0.38
FRMD4A-202ENST00000342409 F2Z2F3 143 aa12.67□□□□□ -0.38
FRMD4A-202ENST00000342409 LINC00310P59036 64 aa12.67□□□□□ -0.38
FRMD4A-202ENST00000342409 SPINK13Q1W4C9 94 aa12.67□□□□□ -0.38
FRMD4A-202ENST00000342409 HIST3H2BBQ8N257 126 aa12.67□□□□□ -0.38
FRMD4A-202ENST00000342409 NAGKQ9UJ70 344 aa12.67□□□□□ -0.38
FRMD4A-202ENST00000342409 FBN1P35555 2871 aaKnown RBP12.67□□□□□ -0.38
FRMD4A-202ENST00000342409 TRAV12-3A0A0B4J271 114 aa12.66□□□□□ -0.38
FRMD4A-202ENST00000342409 PF4P02776 101 aa12.66□□□□□ -0.38
FRMD4A-202ENST00000342409 SSTP61278 116 aa12.66□□□□□ -0.38
FRMD4A-202ENST00000342409 ZNF493Q6ZR52 646 aa12.66□□□□□ -0.38
FRMD4A-202ENST00000342409 MSRB1Q9NZV6 116 aa12.66□□□□□ -0.38
FRMD4A-202ENST00000342409 NOTCH3Q9UM47 2321 aa12.65□□□□□ -0.38
FRMD4A-202ENST00000342409 A0A1B0GW15 77 aa12.65□□□□□ -0.38
FRMD4A-202ENST00000342409 SNAI2O43623 268 aa12.65□□□□□ -0.38
FRMD4A-202ENST00000342409 SRIP30626 198 aa12.65□□□□□ -0.38
FRMD4A-202ENST00000342409 CDKN1BP46527 198 aa12.65□□□□□ -0.38
FRMD4A-202ENST00000342409 KRTAP24-1Q3LI83 254 aa12.65□□□□□ -0.38
FRMD4A-202ENST00000342409 TRRAPQ9Y4A5 3859 aa12.65□□□□□ -0.38
FRMD4A-202ENST00000342409 CRXO43186 299 aaPredicted RBP12.65□□□□□ -0.38
FRMD4A-202ENST00000342409 GNRH2O43555 120 aa12.65□□□□□ -0.38
FRMD4A-202ENST00000342409 NUPR1O60356 82 aa12.65□□□□□ -0.38
FRMD4A-202ENST00000342409 NTF3P20783 257 aa12.65□□□□□ -0.38
FRMD4A-202ENST00000342409 FXYD7P58549 80 aa12.65□□□□□ -0.38
FRMD4A-202ENST00000342409 TMEM256Q8N2U0 113 aa12.65□□□□□ -0.38
FRMD4A-202ENST00000342409 OR10AG1Q8NH19 301 aa12.65□□□□□ -0.38
FRMD4A-202ENST00000342409 H3BVH4 76 aa12.64□□□□□ -0.39
FRMD4A-202ENST00000342409 OR5AL1P0C617 328 aa12.64□□□□□ -0.39
FRMD4A-202ENST00000342409 RBMY1A1P0DJD3 496 aaKnown RBP12.64□□□□□ -0.39
FRMD4A-202ENST00000342409 RBMY1CP0DJD4 496 aa12.64□□□□□ -0.39
FRMD4A-202ENST00000342409 RBMY1FQ15415 496 aaKnown RBP12.64□□□□□ -0.39
FRMD4A-202ENST00000342409 BEAN1Q3B7T3 259 aa12.64□□□□□ -0.39
FRMD4A-202ENST00000342409 DNLZQ5SXM8 178 aa12.64□□□□□ -0.39
FRMD4A-202ENST00000342409 BORCS7Q96B45 105 aa12.64□□□□□ -0.39
FRMD4A-202ENST00000342409 ALKBH7Q9BT30 221 aaPredicted RBP12.64□□□□□ -0.39
FRMD4A-202ENST00000342409 LOC102724200A0A096LPH7 203 aaPredicted RBP12.63□□□□□ -0.39
FRMD4A-202ENST00000342409 SPRY2O43597 315 aa12.63□□□□□ -0.39
FRMD4A-202ENST00000342409 TSPOP30536 169 aa12.63□□□□□ -0.39
FRMD4A-202ENST00000342409 Q0VG73 95 aa12.63□□□□□ -0.39
FRMD4A-202ENST00000342409 PDZD11Q5EBL8 140 aa12.63□□□□□ -0.39
FRMD4A-202ENST00000342409 OR2K2Q8NGT1 345 aa12.63□□□□□ -0.39
FRMD4A-202ENST00000342409 C19orf73Q9NVV2 129 aa12.63□□□□□ -0.39
FRMD4A-202ENST00000342409 RNASE3P12724 160 aaKnown RBP12.62□□□□□ -0.39
FRMD4A-202ENST00000342409 SCRT2Q9NQ03 307 aa12.62□□□□□ -0.39
FRMD4A-202ENST00000342409 IGHV4-4A0A075B6R2 117 aa12.62□□□□□ -0.39
FRMD4A-202ENST00000342409 S100A8P05109 93 aa12.62□□□□□ -0.39
FRMD4A-202ENST00000342409 CD7P09564 240 aa12.62□□□□□ -0.39
FRMD4A-202ENST00000342409 TWIST1Q15672 202 aa12.62□□□□□ -0.39
FRMD4A-202ENST00000342409 TDRG1Q3Y452 100 aa12.62□□□□□ -0.39
FRMD4A-202ENST00000342409 C18orf32Q8TCD1 76 aa12.62□□□□□ -0.39
FRMD4A-202ENST00000342409 OR11H12B2RN74 326 aa12.61□□□□□ -0.39
FRMD4A-202ENST00000342409 IQCJQ1A5X6 159 aa12.61□□□□□ -0.39
FRMD4A-202ENST00000342409 FAM104BQ5XKR9 115 aa12.61□□□□□ -0.39
FRMD4A-202ENST00000342409 PRIMA1Q86XR5 153 aa12.61□□□□□ -0.39
FRMD4A-202ENST00000342409 CLUHP3Q96NS8 147 aa12.61□□□□□ -0.39
FRMD4A-202ENST00000342409 STAB1Q9NY15 2570 aa12.6□□□□□ -0.39
FRMD4A-202ENST00000342409 ASIPP42127 132 aa12.6□□□□□ -0.39
FRMD4A-202ENST00000342409 DMRTA1Q5VZB9 504 aa12.6□□□□□ -0.39
FRMD4A-202ENST00000342409 AMN1Q8IY45 258 aa12.6□□□□□ -0.39
FRMD4A-202ENST00000342409 RCHY1Q96PM5 261 aa12.6□□□□□ -0.39
FRMD4A-202ENST00000342409 SERF1AO75920 110 aa12.59□□□□□ -0.39
FRMD4A-202ENST00000342409 MED14OSP0DP75 135 aa12.59□□□□□ -0.39
FRMD4A-202ENST00000342409 OR10J3Q5JRS4 329 aa12.59□□□□□ -0.39
FRMD4A-202ENST00000342409 TMEM191AQ9H0A3 160 aa12.59□□□□□ -0.39
FRMD4A-202ENST00000342409 WFDC10AQ9H1F0 79 aa12.59□□□□□ -0.39
FRMD4A-202ENST00000342409 CMYA5Q8N3K9 4069 aa12.59□□□□□ -0.39
FRMD4A-202ENST00000342409 AKR1D1P51857 326 aa12.59□□□□□ -0.39
FRMD4A-202ENST00000342409 FAM159AQ6UWV7 190 aa12.59□□□□□ -0.39
FRMD4A-202ENST00000342409 TRPT1Q86TN4 253 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms