RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 FCN3O75636 299 aa9.84□□□□□ -0.83
SSX2IP-201ENST00000342203 SNRPD3P62318 126 aaKnown RBP9.84□□□□□ -0.83
SSX2IP-201ENST00000342203 FOXE3Q13461 319 aa9.84□□□□□ -0.83
SSX2IP-201ENST00000342203 MLST8Q9BVC4 326 aa9.84□□□□□ -0.83
SSX2IP-201ENST00000342203 TAL2Q16559 108 aa9.84□□□□□ -0.83
SSX2IP-201ENST00000342203 C1orf159Q96HA4 380 aa9.84□□□□□ -0.83
SSX2IP-201ENST00000342203 CTSZQ9UBR2 303 aa9.84□□□□□ -0.83
SSX2IP-201ENST00000342203 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.84□□□□□ -0.83
SSX2IP-201ENST00000342203 MYO18BQ8IUG5 2567 aa9.84□□□□□ -0.83
SSX2IP-201ENST00000342203 GAGE5Q13069 117 aa9.84□□□□□ -0.83
SSX2IP-201ENST00000342203 GAGE6Q13070 117 aa9.84□□□□□ -0.83
SSX2IP-201ENST00000342203 SONP18583 2426 aaKnown RBP9.83□□□□□ -0.84
SSX2IP-201ENST00000342203 AGPAT4-IT1Q9H0P7 198 aa9.83□□□□□ -0.84
SSX2IP-201ENST00000342203 A0A0G2JNJ9 132 aa9.83□□□□□ -0.84
SSX2IP-201ENST00000342203 GAGE12JA6NER3 117 aa9.83□□□□□ -0.84
SSX2IP-201ENST00000342203 GAGE7O76087 117 aa9.83□□□□□ -0.84
SSX2IP-201ENST00000342203 GAGE12FP0CL80 117 aa9.83□□□□□ -0.84
SSX2IP-201ENST00000342203 GAGE12GP0CL81 117 aa9.83□□□□□ -0.84
SSX2IP-201ENST00000342203 GAGE12IP0CL82 117 aa9.83□□□□□ -0.84
SSX2IP-201ENST00000342203 GAGE4Q13068 117 aa9.83□□□□□ -0.84
SSX2IP-201ENST00000342203 Q9UFV3 132 aa9.83□□□□□ -0.84
SSX2IP-201ENST00000342203 FOXI1Q12951 378 aa9.83□□□□□ -0.84
SSX2IP-201ENST00000342203 DYNLRB2Q8TF09 96 aa9.82□□□□□ -0.84
SSX2IP-201ENST00000342203 URB1-AS1Q96HZ7 61 aa9.82□□□□□ -0.84
SSX2IP-201ENST00000342203 LINC00477Q96M19 166 aa9.82□□□□□ -0.84
SSX2IP-201ENST00000342203 RNF5Q99942 180 aa9.82□□□□□ -0.84
SSX2IP-201ENST00000342203 TRBV7-9A0A0J9YWB2 115 aa9.82□□□□□ -0.84
SSX2IP-201ENST00000342203 E7EQL1 145 aa9.82□□□□□ -0.84
SSX2IP-201ENST00000342203 LHBP01229 141 aa9.82□□□□□ -0.84
SSX2IP-201ENST00000342203 PRSS33Q8NF86 280 aa9.82□□□□□ -0.84
SSX2IP-201ENST00000342203 RPL39LQ96EH5 51 aaKnown RBP9.82□□□□□ -0.84
SSX2IP-201ENST00000342203 PRSS47A8MTI9 375 aa9.82□□□□□ -0.84
SSX2IP-201ENST00000342203 IFITM1P13164 125 aa9.82□□□□□ -0.84
SSX2IP-201ENST00000342203 C15orf53Q8NAA6 179 aa9.82□□□□□ -0.84
SSX2IP-201ENST00000342203 K7EIM0 57 aa9.81□□□□□ -0.84
SSX2IP-201ENST00000342203 LINC00311Q8N616 119 aa9.81□□□□□ -0.84
SSX2IP-201ENST00000342203 H3BMM0 161 aa9.81□□□□□ -0.84
SSX2IP-201ENST00000342203 OVOL1O14753 267 aa9.81□□□□□ -0.84
SSX2IP-201ENST00000342203 UBE2WQ96B02 151 aa9.81□□□□□ -0.84
SSX2IP-201ENST00000342203 SETD2Q9BYW2 2564 aaPredicted RBP9.81□□□□□ -0.84
SSX2IP-201ENST00000342203 PRAC2D3DTV9 90 aa9.81□□□□□ -0.84
SSX2IP-201ENST00000342203 PMVKQ15126 192 aa9.81□□□□□ -0.84
SSX2IP-201ENST00000342203 DUX3Q96PT4 197 aa9.81□□□□□ -0.84
SSX2IP-201ENST00000342203 SDHAF1A6NFY7 115 aa9.81□□□□□ -0.84
SSX2IP-201ENST00000342203 ATG2AQ2TAZ0 1938 aa9.8□□□□□ -0.84
SSX2IP-201ENST00000342203 REV3LO60673 3130 aa9.8□□□□□ -0.84
SSX2IP-201ENST00000342203 MT-ATP8P03928 68 aa9.8□□□□□ -0.84
SSX2IP-201ENST00000342203 C9orf139Q6ZV77 190 aa9.8□□□□□ -0.84
SSX2IP-201ENST00000342203 NOTCH2Q04721 2471 aa9.8□□□□□ -0.84
SSX2IP-201ENST00000342203 PLEKHB2Q96CS7 222 aa9.8□□□□□ -0.84
SSX2IP-201ENST00000342203 RNF183Q96D59 192 aa9.8□□□□□ -0.84
SSX2IP-201ENST00000342203 EDA2RQ9HAV5 297 aa9.8□□□□□ -0.84
SSX2IP-201ENST00000342203 HIGD1BQ9P298 99 aa9.8□□□□□ -0.84
SSX2IP-201ENST00000342203 I3L2K1 104 aa9.8□□□□□ -0.84
SSX2IP-201ENST00000342203 J3QQQ9 107 aa9.8□□□□□ -0.84
SSX2IP-201ENST00000342203 NUP37Q8NFH4 326 aa9.8□□□□□ -0.84
SSX2IP-201ENST00000342203 CFAP54Q96N23 3096 aa9.8□□□□□ -0.84
SSX2IP-201ENST00000342203 UBE2L6O14933 153 aa9.8□□□□□ -0.84
SSX2IP-201ENST00000342203 KNCNA6PVL3 124 aa9.79□□□□□ -0.84
SSX2IP-201ENST00000342203 F6UB75 175 aa9.79□□□□□ -0.84
SSX2IP-201ENST00000342203 ATP6V0E1O15342 81 aa9.79□□□□□ -0.84
SSX2IP-201ENST00000342203 RS1O15537 224 aa9.79□□□□□ -0.84
SSX2IP-201ENST00000342203 TIMM21Q9BVV7 248 aa9.79□□□□□ -0.84
SSX2IP-201ENST00000342203 SPANXB1Q9NS25 103 aaPredicted RBP9.79□□□□□ -0.84
SSX2IP-201ENST00000342203 INSL3P51460 131 aa9.79□□□□□ -0.84
SSX2IP-201ENST00000342203 TEN1Q86WV5 123 aa9.79□□□□□ -0.84
SSX2IP-201ENST00000342203 DUX5Q96PT3 197 aa9.79□□□□□ -0.84
SSX2IP-201ENST00000342203 SPTBN5Q9NRC6 3674 aaKnown RBP9.79□□□□□ -0.84
SSX2IP-201ENST00000342203 RNASE13Q5GAN3 156 aaKnown RBP9.79□□□□□ -0.84
SSX2IP-201ENST00000342203 C9orf153Q5TBE3 101 aa9.79□□□□□ -0.84
SSX2IP-201ENST00000342203 TRAV41A0A0B4J266 112 aa9.78□□□□□ -0.84
SSX2IP-201ENST00000342203 ZNF80P51504 273 aaPredicted RBP9.78□□□□□ -0.84
SSX2IP-201ENST00000342203 FAM215AQ9Y5M1 114 aa9.78□□□□□ -0.84
SSX2IP-201ENST00000342203 NCKAP5O14513 1909 aa9.78□□□□□ -0.84
SSX2IP-201ENST00000342203 CGB3P0DN86 165 aa9.78□□□□□ -0.84
SSX2IP-201ENST00000342203 CGB7P0DN87 165 aa9.78□□□□□ -0.84
SSX2IP-201ENST00000342203 BRD3OSQ6XYD6 125 aa9.78□□□□□ -0.84
SSX2IP-201ENST00000342203 CITED1Q99966 193 aa9.78□□□□□ -0.84
SSX2IP-201ENST00000342203 GNRH2O43555 120 aa9.78□□□□□ -0.84
SSX2IP-201ENST00000342203 DUSP14O95147 198 aaKnown RBP9.78□□□□□ -0.84
SSX2IP-201ENST00000342203 ZFP2Q6ZN57 461 aa9.78□□□□□ -0.84
SSX2IP-201ENST00000342203 IGLV2-23P01705 113 aa9.78□□□□□ -0.84
SSX2IP-201ENST00000342203 MAPKAPK5-AS1Q8N8E1 139 aa9.78□□□□□ -0.84
SSX2IP-201ENST00000342203 TMEM190Q8WZ59 177 aa9.78□□□□□ -0.84
SSX2IP-201ENST00000342203 CUL9Q8IWT3 2517 aa9.77□□□□□ -0.84
SSX2IP-201ENST00000342203 ANKRD29Q8N6D5 301 aa9.77□□□□□ -0.84
SSX2IP-201ENST00000342203 PHLDA1Q8WV24 401 aaPredicted RBP9.77□□□□□ -0.84
SSX2IP-201ENST00000342203 DEFB1P60022 68 aa9.77□□□□□ -0.85
SSX2IP-201ENST00000342203 AGRNO00468 2067 aa9.77□□□□□ -0.85
SSX2IP-201ENST00000342203 LAMA1P25391 3075 aa9.77□□□□□ -0.85
SSX2IP-201ENST00000342203 A4D1N5 150 aa9.76□□□□□ -0.85
SSX2IP-201ENST00000342203 RHPN1-AS1Q9BWJ2 59 aa9.76□□□□□ -0.85
SSX2IP-201ENST00000342203 CFC1BP0CG36 223 aa9.76□□□□□ -0.85
SSX2IP-201ENST00000342203 CFC1P0CG37 223 aa9.76□□□□□ -0.85
SSX2IP-201ENST00000342203 CRIP1P50238 77 aa9.76□□□□□ -0.85
SSX2IP-201ENST00000342203 E9PLD3 99 aa9.76□□□□□ -0.85
SSX2IP-201ENST00000342203 LINC01587Q99440 93 aa9.76□□□□□ -0.85
SSX2IP-201ENST00000342203 OVOL3O00110 214 aa9.76□□□□□ -0.85
SSX2IP-201ENST00000342203 GAGE2AQ6NT46 116 aa9.76□□□□□ -0.85
SSX2IP-201ENST00000342203 Q71RC1 249 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms