RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 AZU1P20160 251 aa8.21□□□□□ -1.1
CAPRIN1-201ENST00000341394 ATP5LO75964 103 aa8.2□□□□□ -1.1
CAPRIN1-201ENST00000341394 OR4X2Q8NGF9 303 aa8.2□□□□□ -1.1
CAPRIN1-201ENST00000341394 TAX1BP3O14907 124 aa8.2□□□□□ -1.1
CAPRIN1-201ENST00000341394 WFDC2Q14508 124 aa8.2□□□□□ -1.1
CAPRIN1-201ENST00000341394 LINC01549A6NIU2 74 aa8.2□□□□□ -1.1
CAPRIN1-201ENST00000341394 ASIPP42127 132 aa8.2□□□□□ -1.1
CAPRIN1-201ENST00000341394 SUMO2P61956 95 aaKnown RBP8.2□□□□□ -1.1
CAPRIN1-201ENST00000341394 MEIG1Q5JSS6 88 aa8.2□□□□□ -1.1
CAPRIN1-201ENST00000341394 C11orf52Q96A22 123 aa8.2□□□□□ -1.1
CAPRIN1-201ENST00000341394 MS4A6AQ9H2W1 248 aa8.2□□□□□ -1.1
CAPRIN1-201ENST00000341394 A0A1W2PRX2 142 aa8.19□□□□□ -1.1
CAPRIN1-201ENST00000341394 BUB1B-PAK6H3BSN5 160 aa8.19□□□□□ -1.1
CAPRIN1-201ENST00000341394 GAGE1Q13065 139 aa8.19□□□□□ -1.1
CAPRIN1-201ENST00000341394 CENPVQ7Z7K6 275 aaPredicted RBP8.19□□□□□ -1.1
CAPRIN1-201ENST00000341394 ITGB1BP1O14713 200 aa8.19□□□□□ -1.1
CAPRIN1-201ENST00000341394 HLA-DRB4P13762 266 aa8.19□□□□□ -1.1
CAPRIN1-201ENST00000341394 RPS20P60866 119 aaKnown RBP8.19□□□□□ -1.1
CAPRIN1-201ENST00000341394 FAM167A-AS1Q96KT0 104 aa8.19□□□□□ -1.1
CAPRIN1-201ENST00000341394 ZNF747Q9BV97 191 aa8.19□□□□□ -1.1
CAPRIN1-201ENST00000341394 LY96Q9Y6Y9 160 aa8.19□□□□□ -1.1
CAPRIN1-201ENST00000341394 HLA-DRB4X5D2U9 266 aa8.19□□□□□ -1.1
CAPRIN1-201ENST00000341394 SLC25A16P16260 332 aa8.19□□□□□ -1.1
CAPRIN1-201ENST00000341394 FXYD2P54710 66 aa8.19□□□□□ -1.1
CAPRIN1-201ENST00000341394 TRGV9Q99603 122 aa8.19□□□□□ -1.1
CAPRIN1-201ENST00000341394 ANAPC13Q9BS18 74 aa8.19□□□□□ -1.1
CAPRIN1-201ENST00000341394 IGHV2-70DA0A0C4DH43 119 aa8.18□□□□□ -1.1
CAPRIN1-201ENST00000341394 COX8AP10176 69 aa8.18□□□□□ -1.1
CAPRIN1-201ENST00000341394 EGR2P11161 476 aaPredicted RBP8.18□□□□□ -1.1
CAPRIN1-201ENST00000341394 LYRM7Q5U5X0 104 aa8.18□□□□□ -1.1
CAPRIN1-201ENST00000341394 FAM104BQ5XKR9 115 aa8.18□□□□□ -1.1
CAPRIN1-201ENST00000341394 KLHL30-AS1Q8NEE0 82 aa8.18□□□□□ -1.1
CAPRIN1-201ENST00000341394 FAM90A9PA6NNJ1 464 aa8.18□□□□□ -1.1
CAPRIN1-201ENST00000341394 SNCGO76070 127 aa8.18□□□□□ -1.1
CAPRIN1-201ENST00000341394 SPINK8P0C7L1 97 aa8.18□□□□□ -1.1
CAPRIN1-201ENST00000341394 LINC00310P59036 64 aa8.18□□□□□ -1.1
CAPRIN1-201ENST00000341394 SRSF1Q07955 248 aaKnown RBP eCLIP8.18□□□□□ -1.1
CAPRIN1-201ENST00000341394 WIPF2Q8TF74 440 aaPredicted RBP8.18□□□□□ -1.1
CAPRIN1-201ENST00000341394 MXRA5Q9NR99 2828 aa8.18□□□□□ -1.1
CAPRIN1-201ENST00000341394 TRBV19A0A075B6N1 114 aa8.18□□□□□ -1.1
CAPRIN1-201ENST00000341394 VMO1Q7Z5L0 202 aa8.18□□□□□ -1.1
CAPRIN1-201ENST00000341394 GEMIN7Q9H840 131 aaKnown RBP8.18□□□□□ -1.1
CAPRIN1-201ENST00000341394 GCN1Q92616 2671 aaKnown RBP8.18□□□□□ -1.1
CAPRIN1-201ENST00000341394 TRAV12-2A0A075B6T6 113 aa8.18□□□□□ -1.1
CAPRIN1-201ENST00000341394 C9orf118A6NHY6 69 aa8.18□□□□□ -1.1
CAPRIN1-201ENST00000341394 ZFP36P26651 326 aaKnown RBP8.18□□□□□ -1.1
CAPRIN1-201ENST00000341394 LAGE3Q14657 143 aa8.18□□□□□ -1.1
CAPRIN1-201ENST00000341394 SPATA12Q7Z6I5 190 aa8.18□□□□□ -1.1
CAPRIN1-201ENST00000341394 OR13C6PQ8NH95 151 aa8.18□□□□□ -1.1
CAPRIN1-201ENST00000341394 PTH2Q96A98 100 aa8.18□□□□□ -1.1
CAPRIN1-201ENST00000341394 SPXQ9BT56 116 aa8.18□□□□□ -1.1
CAPRIN1-201ENST00000341394 C11orf68Q9H3H3 251 aaKnown RBP8.18□□□□□ -1.1
CAPRIN1-201ENST00000341394 AGRNO00468 2067 aa8.17□□□□□ -1.1
CAPRIN1-201ENST00000341394 TSPAN13O95857 204 aa8.17□□□□□ -1.1
CAPRIN1-201ENST00000341394 ATP5IP56385 69 aaPredicted RBP8.17□□□□□ -1.1
CAPRIN1-201ENST00000341394 RUSC1-AS1Q66K80 236 aa8.17□□□□□ -1.1
CAPRIN1-201ENST00000341394 HIST2H2BCQ6DN03 193 aa8.17□□□□□ -1.1
CAPRIN1-201ENST00000341394 CSTL1Q9H114 145 aa8.17□□□□□ -1.1
CAPRIN1-201ENST00000341394 ITPR2Q14571 2701 aa8.17□□□□□ -1.1
CAPRIN1-201ENST00000341394 TMEM238C9JI98 176 aa8.17□□□□□ -1.1
CAPRIN1-201ENST00000341394 IGLC1P0CG04 106 aa8.17□□□□□ -1.1
CAPRIN1-201ENST00000341394 PHLDA1Q8WV24 401 aaPredicted RBP8.17□□□□□ -1.1
CAPRIN1-201ENST00000341394 EEF1AKMT3Q96AZ1 226 aa8.17□□□□□ -1.1
CAPRIN1-201ENST00000341394 NXT2Q9NPJ8 142 aaKnown RBP8.17□□□□□ -1.1
CAPRIN1-201ENST00000341394 IGHV4-30-2A0A087WSY4 118 aa8.17□□□□□ -1.1
CAPRIN1-201ENST00000341394 IGHV4-61A0A0C4DH41 118 aa8.17□□□□□ -1.1
CAPRIN1-201ENST00000341394 C9JAW5 83 aa8.17□□□□□ -1.1
CAPRIN1-201ENST00000341394 OVOL3O00110 214 aa8.17□□□□□ -1.1
CAPRIN1-201ENST00000341394 IGHV3-53P01767 116 aa8.17□□□□□ -1.1
CAPRIN1-201ENST00000341394 FOXE3Q13461 319 aa8.17□□□□□ -1.1
CAPRIN1-201ENST00000341394 SYT8Q8NBV8 401 aa8.17□□□□□ -1.1
CAPRIN1-201ENST00000341394 C5orf64Q2M2E5 130 aa8.16□□□□□ -1.1
CAPRIN1-201ENST00000341394 PSMG4Q5JS54 123 aa8.16□□□□□ -1.1
CAPRIN1-201ENST00000341394 DEFB125Q8N687 156 aa8.16□□□□□ -1.1
CAPRIN1-201ENST00000341394 LINC00574Q9H8X3 128 aa8.16□□□□□ -1.1
CAPRIN1-201ENST00000341394 TRBV20-1A0A075B6N2 111 aa8.16□□□□□ -1.1
CAPRIN1-201ENST00000341394 C2orf70A6NJV1 201 aa8.16□□□□□ -1.1
CAPRIN1-201ENST00000341394 NDUFS8O00217 210 aa8.16□□□□□ -1.1
CAPRIN1-201ENST00000341394 SHANK2-AS3Q9BTD1 123 aa8.16□□□□□ -1.1
CAPRIN1-201ENST00000341394 A0A1W2PPM0 123 aa8.16□□□□□ -1.1
CAPRIN1-201ENST00000341394 M0R1W7 72 aa8.16□□□□□ -1.1
CAPRIN1-201ENST00000341394 PAX1P15863 534 aa8.16□□□□□ -1.1
CAPRIN1-201ENST00000341394 OR5A1Q8NGJ0 315 aa8.16□□□□□ -1.1
CAPRIN1-201ENST00000341394 OR9G4Q8NGQ1 327 aa8.16□□□□□ -1.1
CAPRIN1-201ENST00000341394 TNFRSF14Q92956 283 aa8.16□□□□□ -1.1
CAPRIN1-201ENST00000341394 IGLV2-8P01709 118 aa8.15□□□□□ -1.1
CAPRIN1-201ENST00000341394 PLA2G2AP14555 144 aa8.15□□□□□ -1.1
CAPRIN1-201ENST00000341394 PVRIGQ6DKI7 326 aa8.15□□□□□ -1.1
CAPRIN1-201ENST00000341394 ZNF833PQ6ZTB9 187 aa8.15□□□□□ -1.1
CAPRIN1-201ENST00000341394 TEX15Q9BXT5 2789 aa8.15□□□□□ -1.1
CAPRIN1-201ENST00000341394 PRAC2D3DTV9 90 aa8.15□□□□□ -1.1
CAPRIN1-201ENST00000341394 FSTL3O95633 263 aa8.15□□□□□ -1.1
CAPRIN1-201ENST00000341394 Q6AWC8 147 aa8.15□□□□□ -1.1
CAPRIN1-201ENST00000341394 LINC00311Q8N616 119 aa8.15□□□□□ -1.1
CAPRIN1-201ENST00000341394 PRR25Q96S07 402 aa8.15□□□□□ -1.1
CAPRIN1-201ENST00000341394 C7orf69Q9H7B7 122 aa8.15□□□□□ -1.1
CAPRIN1-201ENST00000341394 ZNF876PQ49A33 203 aa8.15□□□□□ -1.11
CAPRIN1-201ENST00000341394 DYNAPQ8N1N2 210 aa8.15□□□□□ -1.11
CAPRIN1-201ENST00000341394 C10orf105Q8TEF2 133 aa8.15□□□□□ -1.11
CAPRIN1-201ENST00000341394 IGHV3-16A0A0C4DH30 117 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms