RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 TMEM183AQ8IXX5 376 aa10.75□□□□□ -0.69
VAPA-201ENST00000340541 NDFIP1Q9BT67 221 aa10.75□□□□□ -0.69
VAPA-201ENST00000340541 NKX6-2Q9C056 277 aaPredicted RBP10.75□□□□□ -0.69
VAPA-201ENST00000340541 MRPL16Q9NX20 251 aaKnown RBP10.75□□□□□ -0.69
VAPA-201ENST00000340541 C11orf21Q9P2W6 132 aa10.75□□□□□ -0.69
VAPA-201ENST00000340541 NAGKQ9UJ70 344 aa10.75□□□□□ -0.69
VAPA-201ENST00000340541 TRAV34A0A0B4J273 112 aa10.74□□□□□ -0.69
VAPA-201ENST00000340541 A0A1B0GVY2 172 aa10.74□□□□□ -0.69
VAPA-201ENST00000340541 GNRH2O43555 120 aa10.74□□□□□ -0.69
VAPA-201ENST00000340541 IFNA7P01567 189 aa10.74□□□□□ -0.69
VAPA-201ENST00000340541 SFT2D1Q8WV19 159 aa10.74□□□□□ -0.69
VAPA-201ENST00000340541 TRGV11A0A075B6L2 103 aa10.73□□□□□ -0.69
VAPA-201ENST00000340541 TRGV2A0A075B6R0 118 aa10.73□□□□□ -0.69
VAPA-201ENST00000340541 TRAV26-1A0A087WT03 109 aa10.73□□□□□ -0.69
VAPA-201ENST00000340541 IGHV3-16A0A0C4DH30 117 aa10.73□□□□□ -0.69
VAPA-201ENST00000340541 GCGP01275 180 aa10.73□□□□□ -0.69
VAPA-201ENST00000340541 TYMSP04818 313 aa10.73□□□□□ -0.69
VAPA-201ENST00000340541 OR5I1Q13606 314 aa10.73□□□□□ -0.69
VAPA-201ENST00000340541 RNF212Q495C1 297 aa10.73□□□□□ -0.69
VAPA-201ENST00000340541 AKAP14Q86UN6 197 aa10.73□□□□□ -0.69
VAPA-201ENST00000340541 HIST1H2BAQ96A08 127 aa10.73□□□□□ -0.69
VAPA-201ENST00000340541 ARL2-SNX15V9GYD0 113 aa10.73□□□□□ -0.69
VAPA-201ENST00000340541 NUDT3O95989 172 aa10.72□□□□□ -0.69
VAPA-201ENST00000340541 MED14OSP0DP75 135 aa10.72□□□□□ -0.69
VAPA-201ENST00000340541 SAPCD1Q5SSQ6 148 aa10.72□□□□□ -0.69
VAPA-201ENST00000340541 Q86TA4 180 aa10.72□□□□□ -0.69
VAPA-201ENST00000340541 A0A0J9YY99 117 aa10.71□□□□□ -0.69
VAPA-201ENST00000340541 A0A1B0GV50 99 aa10.71□□□□□ -0.69
VAPA-201ENST00000340541 PRSS29PA6NIE9 313 aa10.71□□□□□ -0.69
VAPA-201ENST00000340541 H3BNG1 76 aa10.71□□□□□ -0.69
VAPA-201ENST00000340541 PAGE4O60829 102 aa10.71□□□□□ -0.69
VAPA-201ENST00000340541 PFN1P07737 140 aaKnown RBP10.71□□□□□ -0.69
VAPA-201ENST00000340541 H2AFB1P0C5Y9 115 aa10.71□□□□□ -0.69
VAPA-201ENST00000340541 SMUG1Q53HV7 270 aa10.71□□□□□ -0.69
VAPA-201ENST00000340541 RASL10AQ92737 203 aa10.71□□□□□ -0.69
VAPA-201ENST00000340541 VSIG2Q96IQ7 327 aa10.71□□□□□ -0.69
VAPA-201ENST00000340541 KCNS1Q96KK3 526 aa10.71□□□□□ -0.69
VAPA-201ENST00000340541 TCEAL7Q9BRU2 100 aa10.71□□□□□ -0.69
VAPA-201ENST00000340541 SPXQ9BT56 116 aa10.71□□□□□ -0.69
VAPA-201ENST00000340541 SDF2L1Q9HCN8 221 aa10.71□□□□□ -0.69
VAPA-201ENST00000340541 DNAH2Q9P225 4427 aa10.7□□□□□ -0.7
VAPA-201ENST00000340541 RTL8CO15255 209 aa10.7□□□□□ -0.7
VAPA-201ENST00000340541 PPT1P50897 306 aa10.7□□□□□ -0.7
VAPA-201ENST00000340541 ZFP69Q49AA0 526 aa10.7□□□□□ -0.7
VAPA-201ENST00000340541 CST9LP1Q5W188 147 aa10.7□□□□□ -0.7
VAPA-201ENST00000340541 COX8CQ7Z4L0 72 aa10.7□□□□□ -0.7
VAPA-201ENST00000340541 UBE2DNLQ8IWF7 75 aa10.7□□□□□ -0.7
VAPA-201ENST00000340541 C9orf62Q8N4C0 152 aa10.7□□□□□ -0.7
VAPA-201ENST00000340541 TRBV6-1A0A0K0K1D8 114 aa10.69□□□□□ -0.7
VAPA-201ENST00000340541 A0A1B0GVG6 124 aa10.69□□□□□ -0.7
VAPA-201ENST00000340541 IGHV3-53P01767 116 aa10.69□□□□□ -0.7
VAPA-201ENST00000340541 CCL20P78556 96 aa10.69□□□□□ -0.7
VAPA-201ENST00000340541 SLC51BQ86UW2 128 aa10.69□□□□□ -0.7
VAPA-201ENST00000340541 TRAV1-1A0A0B4J248 108 aa10.68□□□□□ -0.7
VAPA-201ENST00000340541 IGKV3D-20A0A0C4DH25 116 aa10.68□□□□□ -0.7
VAPA-201ENST00000340541 M0R2P5 195 aa10.68□□□□□ -0.7
VAPA-201ENST00000340541 SULT1A2P50226 295 aa10.68□□□□□ -0.7
VAPA-201ENST00000340541 CRIP1P50238 77 aa10.68□□□□□ -0.7
VAPA-201ENST00000340541 RAB5CP51148 216 aa10.68□□□□□ -0.7
VAPA-201ENST00000340541 FHL2Q14192 279 aa10.68□□□□□ -0.7
VAPA-201ENST00000340541 EIF5AL1Q6IS14 154 aaKnown RBP10.68□□□□□ -0.7
VAPA-201ENST00000340541 Q6ZR54 194 aa10.68□□□□□ -0.7
VAPA-201ENST00000340541 FMC1Q96HJ9 113 aa10.68□□□□□ -0.7
VAPA-201ENST00000340541 LINC00588Q9Y4M8 146 aa10.68□□□□□ -0.7
VAPA-201ENST00000340541 M0R2N4 97 aa10.67□□□□□ -0.7
VAPA-201ENST00000340541 FAM3BP58499 235 aaPredicted RBP10.67□□□□□ -0.7
VAPA-201ENST00000340541 SOHLH1Q5JUK2 328 aa10.67□□□□□ -0.7
VAPA-201ENST00000340541 ZC2HC1AQ96GY0 325 aa10.67□□□□□ -0.7
VAPA-201ENST00000340541 ZNF479Q96JC4 524 aa10.67□□□□□ -0.7
VAPA-201ENST00000340541 C9orf85Q96MD7 179 aa10.67□□□□□ -0.7
VAPA-201ENST00000340541 ZFP30Q9Y2G7 519 aa10.67□□□□□ -0.7
VAPA-201ENST00000340541 IGLV2-18A0A075B6J9 118 aa10.66□□□□□ -0.7
VAPA-201ENST00000340541 A0A096LPF7 62 aa10.66□□□□□ -0.7
VAPA-201ENST00000340541 LTAP01374 205 aa10.66□□□□□ -0.7
VAPA-201ENST00000340541 SFTA3P0C7M3 94 aa10.66□□□□□ -0.7
VAPA-201ENST00000340541 RNASE3P12724 160 aaKnown RBP10.66□□□□□ -0.7
VAPA-201ENST00000340541 CRYBA4P53673 196 aa10.66□□□□□ -0.7
VAPA-201ENST00000340541 ZNRF2Q8NHG8 242 aa10.66□□□□□ -0.7
VAPA-201ENST00000340541 DNAH17Q9UFH2 4485 aa10.65□□□□□ -0.7
VAPA-201ENST00000340541 FAT2Q9NYQ8 4349 aa10.65□□□□□ -0.7
VAPA-201ENST00000340541 SCO2A0A1W2PP80 73 aa10.65□□□□□ -0.7
VAPA-201ENST00000340541 FABP5P3A8MUU1 101 aa10.65□□□□□ -0.7
VAPA-201ENST00000340541 AKR1C3P42330 323 aa10.65□□□□□ -0.7
VAPA-201ENST00000340541 CCL18P55774 89 aa10.65□□□□□ -0.7
VAPA-201ENST00000340541 UBE2G1P62253 170 aa10.65□□□□□ -0.7
VAPA-201ENST00000340541 PRO0255Q9UI72 69 aa10.65□□□□□ -0.7
VAPA-201ENST00000340541 KIAA1109Q2LD37 5005 aa10.65□□□□□ -0.7
VAPA-201ENST00000340541 TRAV4A0A0B4J268 109 aa10.64□□□□□ -0.71
VAPA-201ENST00000340541 ESRGQ1W209 222 aa10.64□□□□□ -0.71
VAPA-201ENST00000340541 ZNF674Q2M3X9 581 aa10.64□□□□□ -0.71
VAPA-201ENST00000340541 ZNF575Q86XF7 245 aa10.64□□□□□ -0.71
VAPA-201ENST00000340541 GNG13Q9P2W3 67 aa10.64□□□□□ -0.71
VAPA-201ENST00000340541 HHLA3Q9XRX5 114 aa10.64□□□□□ -0.71
VAPA-201ENST00000340541 PAX4O43316 350 aa10.63□□□□□ -0.71
VAPA-201ENST00000340541 SH2D1AO60880 128 aa10.63□□□□□ -0.71
VAPA-201ENST00000340541 SLAQ13239 276 aa10.63□□□□□ -0.71
VAPA-201ENST00000340541 PTH2Q96A98 100 aa10.63□□□□□ -0.71
VAPA-201ENST00000340541 MANBALQ9NQG1 85 aa10.63□□□□□ -0.71
VAPA-201ENST00000340541 PCLOQ9Y6V0 5065 aa10.63□□□□□ -0.71
VAPA-201ENST00000340541 TRGV4A0A0C4DH28 118 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms