RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 C10orf105Q8TEF2 133 aa11.46□□□□□ -0.57
RET-201ENST00000340058 WIPF2Q8TF74 440 aaPredicted RBP11.46□□□□□ -0.57
RET-201ENST00000340058 FANCD2OSQ96PS1 177 aa11.46□□□□□ -0.57
RET-201ENST00000340058 DNAH14Q0VDD8 3507 aa11.46□□□□□ -0.57
RET-201ENST00000340058 IGKV1D-37A0A075B6S9 117 aa11.46□□□□□ -0.57
RET-201ENST00000340058 OR13C6PQ8NH95 151 aa11.46□□□□□ -0.57
RET-201ENST00000340058 FBXL19-AS1Q494R0 122 aa11.46□□□□□ -0.58
RET-201ENST00000340058 SAMD13Q5VXD3 122 aa11.46□□□□□ -0.58
RET-201ENST00000340058 AJUBAQ96IF1 538 aa11.46□□□□□ -0.58
RET-201ENST00000340058 DTX2Q86UW9 622 aa11.45□□□□□ -0.58
RET-201ENST00000340058 LINC00173Q6ZV60 143 aa11.45□□□□□ -0.58
RET-201ENST00000340058 CHCHD5Q9BSY4 110 aa11.45□□□□□ -0.58
RET-201ENST00000340058 SPCS1Q9Y6A9 102 aa11.45□□□□□ -0.58
RET-201ENST00000340058 TRGV11A0A075B6L2 103 aa11.45□□□□□ -0.58
RET-201ENST00000340058 NDUFA4O00483 81 aa11.45□□□□□ -0.58
RET-201ENST00000340058 LTAP01374 205 aa11.45□□□□□ -0.58
RET-201ENST00000340058 LMO4P61968 165 aa11.45□□□□□ -0.58
RET-201ENST00000340058 TRAV2A0A0B4J234 112 aa11.45□□□□□ -0.58
RET-201ENST00000340058 IGHV1-24A0A0C4DH33 117 aa11.45□□□□□ -0.58
RET-201ENST00000340058 GATA3P23771 443 aa11.45□□□□□ -0.58
RET-201ENST00000340058 COTL1Q14019 142 aa11.45□□□□□ -0.58
RET-201ENST00000340058 SIGLEC8Q9NYZ4 499 aa11.45□□□□□ -0.58
RET-201ENST00000340058 J3QKU1 62 aa11.44□□□□□ -0.58
RET-201ENST00000340058 CFHR4Q92496 578 aa11.44□□□□□ -0.58
RET-201ENST00000340058 C1orf159Q96HA4 380 aa11.44□□□□□ -0.58
RET-201ENST00000340058 IGHV3-38A0A0C4DH36 116 aa11.44□□□□□ -0.58
RET-201ENST00000340058 SNHG12Q9BXW3 62 aa11.44□□□□□ -0.58
RET-201ENST00000340058 IGLL1P15814 213 aa11.43□□□□□ -0.58
RET-201ENST00000340058 PYGO2Q9BRQ0 406 aa11.43□□□□□ -0.58
RET-201ENST00000340058 GFRA4Q9GZZ7 299 aa11.43□□□□□ -0.58
RET-201ENST00000340058 PRSS46E5RG02 174 aa11.43□□□□□ -0.58
RET-201ENST00000340058 EIF4EBP1Q13541 118 aaPredicted RBP11.43□□□□□ -0.58
RET-201ENST00000340058 UNQ9165/PRO28630Q6UXU0 137 aa11.43□□□□□ -0.58
RET-201ENST00000340058 SPOCK3Q9BQ16 436 aa11.43□□□□□ -0.58
RET-201ENST00000340058 NPBQ8NG41 125 aa11.43□□□□□ -0.58
RET-201ENST00000340058 C11orf68Q9H3H3 251 aaKnown RBP11.43□□□□□ -0.58
RET-201ENST00000340058 IGHV7-4-1A0A0J9YVY3 117 aa11.42□□□□□ -0.58
RET-201ENST00000340058 HOXD3P31249 432 aaPredicted RBP11.42□□□□□ -0.58
RET-201ENST00000340058 CT83Q5H943 113 aa11.42□□□□□ -0.58
RET-201ENST00000340058 BUB3O43684 328 aa11.42□□□□□ -0.58
RET-201ENST00000340058 SLURP1P55000 103 aa11.42□□□□□ -0.58
RET-201ENST00000340058 CIRBPQ14011 172 aaKnown RBP11.42□□□□□ -0.58
RET-201ENST00000340058 GTSF1Q8WW33 167 aa11.42□□□□□ -0.58
RET-201ENST00000340058 C5orf56Q8N8D9 126 aa11.42□□□□□ -0.58
RET-201ENST00000340058 TMEM101Q96IK0 257 aa11.42□□□□□ -0.58
RET-201ENST00000340058 SIRPDQ9H106 197 aa11.42□□□□□ -0.58
RET-201ENST00000340058 TRAV13-1A0A0B4J241 112 aa11.41□□□□□ -0.58
RET-201ENST00000340058 Q6ZVH6 145 aa11.41□□□□□ -0.58
RET-201ENST00000340058 LINC00322Q6ZN03 302 aaPredicted RBP11.41□□□□□ -0.58
RET-201ENST00000340058 ORAOV1Q8WV07 137 aa11.41□□□□□ -0.58
RET-201ENST00000340058 ZNF625Q96I27 306 aaPredicted RBP11.41□□□□□ -0.58
RET-201ENST00000340058 C2orf88Q9BSF0 95 aa11.41□□□□□ -0.58
RET-201ENST00000340058 SMPXQ9UHP9 88 aa11.41□□□□□ -0.58
RET-201ENST00000340058 COX6CP09669 75 aa11.41□□□□□ -0.58
RET-201ENST00000340058 SMIM12Q96EX1 92 aa11.41□□□□□ -0.58
RET-201ENST00000340058 A0A1B0GWB2 263 aa11.4□□□□□ -0.58
RET-201ENST00000340058 FAM231BA6NCW3 169 aa11.4□□□□□ -0.58
RET-201ENST00000340058 ANKRD17O75179 2603 aaKnown RBP11.4□□□□□ -0.58
RET-201ENST00000340058 ZNF124Q15973 351 aa11.4□□□□□ -0.58
RET-201ENST00000340058 VCYO14598 125 aa11.4□□□□□ -0.58
RET-201ENST00000340058 C2orf66Q6UXQ4 117 aa11.4□□□□□ -0.58
RET-201ENST00000340058 APRG1Q8IVJ8 170 aa11.4□□□□□ -0.58
RET-201ENST00000340058 SPEGQ15772 3267 aa11.4□□□□□ -0.58
RET-201ENST00000340058 RNASE13Q5GAN3 156 aaKnown RBP11.4□□□□□ -0.59
RET-201ENST00000340058 VPREB3Q9UKI3 123 aa11.4□□□□□ -0.59
RET-201ENST00000340058 LINC01619G3V211 115 aa11.39□□□□□ -0.59
RET-201ENST00000340058 ZNF415Q09FC8 603 aa11.39□□□□□ -0.59
RET-201ENST00000340058 LURAP1LQ8IV03 231 aa11.39□□□□□ -0.59
RET-201ENST00000340058 SPXQ9BT56 116 aa11.39□□□□□ -0.59
RET-201ENST00000340058 TP53TG1Q9Y2A0 90 aa11.39□□□□□ -0.59
RET-201ENST00000340058 SNCGO76070 127 aa11.39□□□□□ -0.59
RET-201ENST00000340058 IGLC2P0DOY2 106 aa11.39□□□□□ -0.59
RET-201ENST00000340058 IGLC3P0DOY3 106 aa11.39□□□□□ -0.59
RET-201ENST00000340058 IGF2BP2-AS1Q96M15 143 aa11.39□□□□□ -0.59
RET-201ENST00000340058 KLF2Q9Y5W3 355 aaPredicted RBP11.39□□□□□ -0.59
RET-201ENST00000340058 SDHAF1A6NFY7 115 aa11.38□□□□□ -0.59
RET-201ENST00000340058 SMAGPQ0VAQ4 97 aa11.38□□□□□ -0.59
RET-201ENST00000340058 DEFB113Q30KQ7 82 aa11.38□□□□□ -0.59
RET-201ENST00000340058 DKK2Q9UBU2 259 aa11.38□□□□□ -0.59
RET-201ENST00000340058 CDKN1BP46527 198 aa11.38□□□□□ -0.59
RET-201ENST00000340058 MEGF9Q9H1U4 602 aa11.38□□□□□ -0.59
RET-201ENST00000340058 LINC00574Q9H8X3 128 aa11.37□□□□□ -0.59
RET-201ENST00000340058 INSP01308 110 aa11.37□□□□□ -0.59
RET-201ENST00000340058 CRYGCP07315 174 aa11.37□□□□□ -0.59
RET-201ENST00000340058 IGHV1OR15-1A0A075B7D0 117 aa11.37□□□□□ -0.59
RET-201ENST00000340058 GAGE12JA6NER3 117 aa11.37□□□□□ -0.59
RET-201ENST00000340058 GAGE1Q13065 139 aa11.37□□□□□ -0.59
RET-201ENST00000340058 GAGE4Q13068 117 aa11.37□□□□□ -0.59
RET-201ENST00000340058 GAGE5Q13069 117 aa11.37□□□□□ -0.59
RET-201ENST00000340058 GAGE13Q4V321 117 aa11.37□□□□□ -0.59
RET-201ENST00000340058 MRPL35Q9NZE8 188 aaKnown RBP11.37□□□□□ -0.59
RET-201ENST00000340058 PCP4P48539 62 aa11.36□□□□□ -0.59
RET-201ENST00000340058 USP24Q9UPU5 2620 aa11.36□□□□□ -0.59
RET-201ENST00000340058 GAGE12BA1L429 117 aa11.36□□□□□ -0.59
RET-201ENST00000340058 GAGE7O76087 117 aa11.36□□□□□ -0.59
RET-201ENST00000340058 GAGE12FP0CL80 117 aa11.36□□□□□ -0.59
RET-201ENST00000340058 GAGE12GP0CL81 117 aa11.36□□□□□ -0.59
RET-201ENST00000340058 GAGE12IP0CL82 117 aa11.36□□□□□ -0.59
RET-201ENST00000340058 C10orf99Q6UWK7 81 aa11.36□□□□□ -0.59
RET-201ENST00000340058 MTURNQ8N3F0 131 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms