RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 C12orf54Q6X4T0 127 aa8.08□□□□□ -1.12
TRAF3IP2-201ENST00000340026 ZNF843Q8N446 348 aa8.08□□□□□ -1.12
TRAF3IP2-201ENST00000340026 STPG4Q8N801 248 aa8.08□□□□□ -1.12
TRAF3IP2-201ENST00000340026 ORAOV1Q8WV07 137 aa8.08□□□□□ -1.12
TRAF3IP2-201ENST00000340026 NCR2O95944 276 aa8.08□□□□□ -1.12
TRAF3IP2-201ENST00000340026 PPP1R17O96001 155 aa8.08□□□□□ -1.12
TRAF3IP2-201ENST00000340026 IGHV3-11P01762 117 aa8.08□□□□□ -1.12
TRAF3IP2-201ENST00000340026 IGHV4-59P01825 116 aa8.08□□□□□ -1.12
TRAF3IP2-201ENST00000340026 HLA-DRB4P13762 266 aa8.08□□□□□ -1.12
TRAF3IP2-201ENST00000340026 TMEM208Q9BTX3 173 aa8.08□□□□□ -1.12
TRAF3IP2-201ENST00000340026 HLA-DRB4X5D2U9 266 aa8.08□□□□□ -1.12
TRAF3IP2-201ENST00000340026 UBR5O95071 2799 aaPredicted RBP8.07□□□□□ -1.12
TRAF3IP2-201ENST00000340026 SMKR1H3BMG3 65 aa8.07□□□□□ -1.12
TRAF3IP2-201ENST00000340026 IGHV4-31P0DP07 118 aa8.07□□□□□ -1.12
TRAF3IP2-201ENST00000340026 ASIPP42127 132 aa8.07□□□□□ -1.12
TRAF3IP2-201ENST00000340026 SPANXN1Q5VSR9 72 aa8.07□□□□□ -1.12
TRAF3IP2-201ENST00000340026 UBE2E2Q96LR5 201 aa8.07□□□□□ -1.12
TRAF3IP2-201ENST00000340026 ATP5LO75964 103 aa8.07□□□□□ -1.12
TRAF3IP2-201ENST00000340026 LGALS1P09382 135 aaKnown RBP8.07□□□□□ -1.12
TRAF3IP2-201ENST00000340026 EVI2AP22794 236 aa8.07□□□□□ -1.12
TRAF3IP2-201ENST00000340026 FLNCQ14315 2725 aa8.07□□□□□ -1.12
TRAF3IP2-201ENST00000340026 MUC21A0A0G2JKD1 596 aa8.06□□□□□ -1.12
TRAF3IP2-201ENST00000340026 MUC21A0A140T8X8 626 aa8.06□□□□□ -1.12
TRAF3IP2-201ENST00000340026 FGF6P10767 208 aa8.06□□□□□ -1.12
TRAF3IP2-201ENST00000340026 MUC21Q5SSG8 566 aa8.06□□□□□ -1.12
TRAF3IP2-201ENST00000340026 DPH3P1Q9H4G8 78 aa8.06□□□□□ -1.12
TRAF3IP2-201ENST00000340026 ZFHX3Q15911 3703 aa8.06□□□□□ -1.12
TRAF3IP2-201ENST00000340026 LINC01549A6NIU2 74 aa8.06□□□□□ -1.12
TRAF3IP2-201ENST00000340026 BOD1L2Q8IYS8 172 aa8.06□□□□□ -1.12
TRAF3IP2-201ENST00000340026 TRAV2A0A0B4J234 112 aa8.05□□□□□ -1.12
TRAF3IP2-201ENST00000340026 ZNF25P17030 456 aaPredicted RBP8.05□□□□□ -1.12
TRAF3IP2-201ENST00000340026 LAGE3Q14657 143 aa8.05□□□□□ -1.12
TRAF3IP2-201ENST00000340026 DEFB113Q30KQ7 82 aa8.05□□□□□ -1.12
TRAF3IP2-201ENST00000340026 OR9G4Q8NGQ1 327 aa8.05□□□□□ -1.12
TRAF3IP2-201ENST00000340026 BBC3Q96PG8 261 aaPredicted RBP8.05□□□□□ -1.12
TRAF3IP2-201ENST00000340026 ZNF702PQ9H963 129 aa8.05□□□□□ -1.12
TRAF3IP2-201ENST00000340026 H3BVH4 76 aa8.05□□□□□ -1.12
TRAF3IP2-201ENST00000340026 TGFAP01135 160 aa8.05□□□□□ -1.12
TRAF3IP2-201ENST00000340026 LEPP41159 167 aa8.05□□□□□ -1.12
TRAF3IP2-201ENST00000340026 TMEM86BQ8N661 226 aa8.05□□□□□ -1.12
TRAF3IP2-201ENST00000340026 TEX29Q8N6K0 151 aa8.05□□□□□ -1.12
TRAF3IP2-201ENST00000340026 CR1P17927 2039 aa8.05□□□□□ -1.12
TRAF3IP2-201ENST00000340026 COL12A1Q99715 3063 aa8.05□□□□□ -1.12
TRAF3IP2-201ENST00000340026 IGHV4OR15-8A0A075B7B6 117 aa8.05□□□□□ -1.12
TRAF3IP2-201ENST00000340026 A0A087WW49 117 aa8.05□□□□□ -1.12
TRAF3IP2-201ENST00000340026 K7EQG2 157 aa8.05□□□□□ -1.12
TRAF3IP2-201ENST00000340026 GAS8-AS1O95177 125 aa8.05□□□□□ -1.12
TRAF3IP2-201ENST00000340026 RNASE3P12724 160 aaKnown RBP8.05□□□□□ -1.12
TRAF3IP2-201ENST00000340026 ODF1Q14990 250 aa8.05□□□□□ -1.12
TRAF3IP2-201ENST00000340026 ANXA2RQ3ZCQ2 193 aa8.05□□□□□ -1.12
TRAF3IP2-201ENST00000340026 C2orf91Q6ZV80 131 aa8.05□□□□□ -1.12
TRAF3IP2-201ENST00000340026 CLUHP3Q96NS8 147 aa8.05□□□□□ -1.12
TRAF3IP2-201ENST00000340026 SPTAN1Q13813 2472 aaKnown RBP8.04□□□□□ -1.12
TRAF3IP2-201ENST00000340026 USP24Q9UPU5 2620 aa8.04□□□□□ -1.12
TRAF3IP2-201ENST00000340026 A8MTW9 85 aa8.04□□□□□ -1.12
TRAF3IP2-201ENST00000340026 BVES-AS1Q5T3Y7 98 aa8.04□□□□□ -1.12
TRAF3IP2-201ENST00000340026 NRGNQ92686 78 aa8.04□□□□□ -1.12
TRAF3IP2-201ENST00000340026 SMIM2Q9BVW6 85 aa8.04□□□□□ -1.12
TRAF3IP2-201ENST00000340026 ACACBO00763 2458 aa8.04□□□□□ -1.12
TRAF3IP2-201ENST00000340026 TRAV12-1A0A0B4J245 112 aa8.04□□□□□ -1.12
TRAF3IP2-201ENST00000340026 CD5LO43866 347 aa8.04□□□□□ -1.12
TRAF3IP2-201ENST00000340026 ORMDL2Q53FV1 153 aa8.04□□□□□ -1.12
TRAF3IP2-201ENST00000340026 WFDC12Q8WWY7 111 aa8.04□□□□□ -1.12
TRAF3IP2-201ENST00000340026 AP1S3Q96PC3 154 aa8.04□□□□□ -1.12
TRAF3IP2-201ENST00000340026 COX11Q9Y6N1 276 aa8.04□□□□□ -1.12
TRAF3IP2-201ENST00000340026 KIF25-AS1Q9Y6Z4 181 aa8.04□□□□□ -1.12
TRAF3IP2-201ENST00000340026 HINT1P49773 126 aaPredicted RBP8.03□□□□□ -1.12
TRAF3IP2-201ENST00000340026 PHLDA3Q9Y5J5 127 aa8.03□□□□□ -1.12
TRAF3IP2-201ENST00000340026 A0A0J9YX75 114 aa8.03□□□□□ -1.12
TRAF3IP2-201ENST00000340026 BATFQ16520 125 aa8.03□□□□□ -1.12
TRAF3IP2-201ENST00000340026 Q6ZQT7 251 aa8.03□□□□□ -1.12
TRAF3IP2-201ENST00000340026 TMEM158Q8WZ71 300 aa8.03□□□□□ -1.12
TRAF3IP2-201ENST00000340026 J3KRW8 73 aa8.02□□□□□ -1.13
TRAF3IP2-201ENST00000340026 S100A4P26447 101 aaKnown RBP8.02□□□□□ -1.13
TRAF3IP2-201ENST00000340026 SNRPD3P62318 126 aaKnown RBP8.02□□□□□ -1.13
TRAF3IP2-201ENST00000340026 SEC11AP67812 179 aa8.02□□□□□ -1.13
TRAF3IP2-201ENST00000340026 ANKRD39Q53RE8 183 aa8.02□□□□□ -1.13
TRAF3IP2-201ENST00000340026 HHLA3Q9XRX5 114 aa8.02□□□□□ -1.13
TRAF3IP2-201ENST00000340026 DUSP14O95147 198 aaKnown RBP8.02□□□□□ -1.13
TRAF3IP2-201ENST00000340026 SMIM17P0DL12 118 aa8.02□□□□□ -1.13
TRAF3IP2-201ENST00000340026 GATA1P15976 413 aaPredicted RBP8.02□□□□□ -1.13
TRAF3IP2-201ENST00000340026 G0S2P27469 103 aa8.02□□□□□ -1.13
TRAF3IP2-201ENST00000340026 LINC00315P59091 139 aa8.02□□□□□ -1.13
TRAF3IP2-201ENST00000340026 SUMO2P61956 95 aaKnown RBP8.02□□□□□ -1.13
TRAF3IP2-201ENST00000340026 RPL11P62913 178 aaKnown RBP8.02□□□□□ -1.13
TRAF3IP2-201ENST00000340026 LCNL1Q6ZST4 164 aa8.02□□□□□ -1.13
TRAF3IP2-201ENST00000340026 RASL10AQ92737 203 aa8.02□□□□□ -1.13
TRAF3IP2-201ENST00000340026 HIGD1BQ9P298 99 aa8.02□□□□□ -1.13
TRAF3IP2-201ENST00000340026 C7orf71A4D174 169 aa8.01□□□□□ -1.13
TRAF3IP2-201ENST00000340026 RNASE4P34096 147 aaKnown RBP8.01□□□□□ -1.13
TRAF3IP2-201ENST00000340026 MPV17L2Q567V2 206 aa8.01□□□□□ -1.13
TRAF3IP2-201ENST00000340026 TOMM6Q96B49 74 aa8.01□□□□□ -1.13
TRAF3IP2-201ENST00000340026 C9orf85Q96MD7 179 aa8.01□□□□□ -1.13
TRAF3IP2-201ENST00000340026 RNF223E7ERA6 249 aa8.01□□□□□ -1.13
TRAF3IP2-201ENST00000340026 TFPI2P48307 235 aa8.01□□□□□ -1.13
TRAF3IP2-201ENST00000340026 KRTAP1-3Q8IUG1 177 aa8.01□□□□□ -1.13
TRAF3IP2-201ENST00000340026 MCRIP2Q9BUT9 160 aaKnown RBP8.01□□□□□ -1.13
TRAF3IP2-201ENST00000340026 F6UB75 175 aa8□□□□□ -1.13
TRAF3IP2-201ENST00000340026 NUDT3O95989 172 aa8□□□□□ -1.13
TRAF3IP2-201ENST00000340026 FAM159AQ6UWV7 190 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms