RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 C2orf70A6NJV1 201 aa5.55□□□□□ -1.52
SRFBP1-201ENST00000339397 ESDP10768 282 aa5.55□□□□□ -1.52
SRFBP1-201ENST00000339397 RNASE4P34096 147 aaKnown RBP5.55□□□□□ -1.52
SRFBP1-201ENST00000339397 KLF5Q13887 457 aaPredicted RBP5.55□□□□□ -1.52
SRFBP1-201ENST00000339397 COX19Q49B96 90 aa5.55□□□□□ -1.52
SRFBP1-201ENST00000339397 PSMG4Q5JS54 123 aa5.55□□□□□ -1.52
SRFBP1-201ENST00000339397 RNASEKQ6P5S7 137 aaKnown RBP5.55□□□□□ -1.52
SRFBP1-201ENST00000339397 DLX4Q92988 240 aaPredicted RBP5.55□□□□□ -1.52
SRFBP1-201ENST00000339397 MRPL53Q96EL3 112 aaKnown RBP5.55□□□□□ -1.52
SRFBP1-201ENST00000339397 TMEM89A2RUT3 159 aa5.54□□□□□ -1.52
SRFBP1-201ENST00000339397 SCGB1D1O95968 90 aa5.54□□□□□ -1.52
SRFBP1-201ENST00000339397 CD28P10747 220 aa5.54□□□□□ -1.52
SRFBP1-201ENST00000339397 MAJINQ3KP22 176 aa5.54□□□□□ -1.52
SRFBP1-201ENST00000339397 OR10AG1Q8NH19 301 aa5.54□□□□□ -1.52
SRFBP1-201ENST00000339397 UFC1Q9Y3C8 167 aa5.54□□□□□ -1.52
SRFBP1-201ENST00000339397 GNRH2O43555 120 aa5.54□□□□□ -1.52
SRFBP1-201ENST00000339397 ZNF324O75467 553 aaPredicted RBP5.54□□□□□ -1.52
SRFBP1-201ENST00000339397 NCR2O95944 276 aa5.54□□□□□ -1.52
SRFBP1-201ENST00000339397 FXYD7P58549 80 aa5.54□□□□□ -1.52
SRFBP1-201ENST00000339397 RIGQ13278 110 aa5.54□□□□□ -1.52
SRFBP1-201ENST00000339397 LINC00173Q6ZV60 143 aa5.54□□□□□ -1.52
SRFBP1-201ENST00000339397 KLHL30-AS1Q8NEE0 82 aa5.54□□□□□ -1.52
SRFBP1-201ENST00000339397 OR10J6PQ8NGY7 276 aa5.54□□□□□ -1.52
SRFBP1-201ENST00000339397 KCNS1Q96KK3 526 aa5.54□□□□□ -1.52
SRFBP1-201ENST00000339397 ATRQ13535 2644 aa5.54□□□□□ -1.52
SRFBP1-201ENST00000339397 TRAV12-2A0A075B6T6 113 aa5.53□□□□□ -1.52
SRFBP1-201ENST00000339397 LOC389332A0A1B0GUA5 103 aa5.53□□□□□ -1.52
SRFBP1-201ENST00000339397 GATA1P15976 413 aaPredicted RBP5.53□□□□□ -1.52
SRFBP1-201ENST00000339397 EVI2AP22794 236 aa5.53□□□□□ -1.52
SRFBP1-201ENST00000339397 ZNF664Q8N3J9 261 aa5.53□□□□□ -1.52
SRFBP1-201ENST00000339397 D6R8Y8 96 aa5.53□□□□□ -1.52
SRFBP1-201ENST00000339397 M0R2Z0 102 aa5.53□□□□□ -1.52
SRFBP1-201ENST00000339397 CTRLP40313 264 aa5.53□□□□□ -1.52
SRFBP1-201ENST00000339397 KRTDAPP60985 99 aa5.53□□□□□ -1.52
SRFBP1-201ENST00000339397 MRPL51Q4U2R6 128 aaKnown RBP5.53□□□□□ -1.52
SRFBP1-201ENST00000339397 DNLZQ5SXM8 178 aa5.53□□□□□ -1.52
SRFBP1-201ENST00000339397 LINC01006Q8NI28 216 aa5.53□□□□□ -1.52
SRFBP1-201ENST00000339397 LINC00477Q96M19 166 aa5.53□□□□□ -1.52
SRFBP1-201ENST00000339397 MUC4Q99102 2169 aa5.53□□□□□ -1.52
SRFBP1-201ENST00000339397 FBLL1A6NHQ2 334 aaKnown RBP5.53□□□□□ -1.52
SRFBP1-201ENST00000339397 H3BVH4 76 aa5.53□□□□□ -1.52
SRFBP1-201ENST00000339397 LY6G6DO95868 133 aa5.53□□□□□ -1.52
SRFBP1-201ENST00000339397 PRM2P04554 102 aa5.53□□□□□ -1.52
SRFBP1-201ENST00000339397 DEFA6Q01524 100 aa5.53□□□□□ -1.52
SRFBP1-201ENST00000339397 ANXA2RQ3ZCQ2 193 aa5.53□□□□□ -1.52
SRFBP1-201ENST00000339397 FAM104BQ5XKR9 115 aa5.53□□□□□ -1.52
SRFBP1-201ENST00000339397 OR1N2Q8NGR9 330 aa5.53□□□□□ -1.52
SRFBP1-201ENST00000339397 FAM19A4Q96LR4 140 aa5.53□□□□□ -1.52
SRFBP1-201ENST00000339397 CITED2Q99967 270 aaPredicted RBP5.53□□□□□ -1.52
SRFBP1-201ENST00000339397 MCRIP2Q9BUT9 160 aaKnown RBP5.53□□□□□ -1.52
SRFBP1-201ENST00000339397 K7EQG2 157 aa5.52□□□□□ -1.53
SRFBP1-201ENST00000339397 OVOL1O14753 267 aa5.52□□□□□ -1.53
SRFBP1-201ENST00000339397 HSBP1O75506 76 aa5.52□□□□□ -1.53
SRFBP1-201ENST00000339397 IFI27P40305 119 aaPredicted RBP5.52□□□□□ -1.53
SRFBP1-201ENST00000339397 PAFAH1B2P68402 229 aa5.52□□□□□ -1.53
SRFBP1-201ENST00000339397 ZNF493Q6ZR52 646 aa5.52□□□□□ -1.53
SRFBP1-201ENST00000339397 SPATA12Q7Z6I5 190 aa5.52□□□□□ -1.53
SRFBP1-201ENST00000339397 RAX2Q96IS3 184 aa5.52□□□□□ -1.53
SRFBP1-201ENST00000339397 PPP1R14DQ9NXH3 145 aa5.52□□□□□ -1.53
SRFBP1-201ENST00000339397 NBEAL2Q6ZNJ1 2754 aa5.52□□□□□ -1.53
SRFBP1-201ENST00000339397 TRAV26-2A0A0B4J265 109 aa5.52□□□□□ -1.53
SRFBP1-201ENST00000339397 TRAV12-3A0A0B4J271 114 aa5.52□□□□□ -1.53
SRFBP1-201ENST00000339397 LINC01619G3V211 115 aa5.52□□□□□ -1.53
SRFBP1-201ENST00000339397 LGALS9O00182 355 aa5.52□□□□□ -1.53
SRFBP1-201ENST00000339397 C3orf79P0CE67 100 aa5.52□□□□□ -1.53
SRFBP1-201ENST00000339397 EBLN2Q6P2I7 272 aa5.52□□□□□ -1.53
SRFBP1-201ENST00000339397 TMEM61Q8N0U2 210 aa5.52□□□□□ -1.53
SRFBP1-201ENST00000339397 Q8N976 141 aa5.52□□□□□ -1.53
SRFBP1-201ENST00000339397 DPF1Q92782 380 aa5.52□□□□□ -1.53
SRFBP1-201ENST00000339397 RNF185Q96GF1 192 aa5.52□□□□□ -1.53
SRFBP1-201ENST00000339397 F8P00451 2351 aa5.52□□□□□ -1.53
SRFBP1-201ENST00000339397 KNCNA6PVL3 124 aa5.51□□□□□ -1.53
SRFBP1-201ENST00000339397 LINC00614P0C842 121 aa5.51□□□□□ -1.53
SRFBP1-201ENST00000339397 Q6AWC8 147 aa5.51□□□□□ -1.53
SRFBP1-201ENST00000339397 ATOH7Q8N100 152 aa5.51□□□□□ -1.53
SRFBP1-201ENST00000339397 TMEM86BQ8N661 226 aa5.51□□□□□ -1.53
SRFBP1-201ENST00000339397 OR9G4Q8NGQ1 327 aa5.51□□□□□ -1.53
SRFBP1-201ENST00000339397 C4orf3Q8WVX3 66 aa5.51□□□□□ -1.53
SRFBP1-201ENST00000339397 BORCS7Q96B45 105 aa5.51□□□□□ -1.53
SRFBP1-201ENST00000339397 NPYP01303 97 aa5.51□□□□□ -1.53
SRFBP1-201ENST00000339397 RAB4AP20338 218 aa5.51□□□□□ -1.53
SRFBP1-201ENST00000339397 SPINK13Q1W4C9 94 aa5.51□□□□□ -1.53
SRFBP1-201ENST00000339397 IGHV1-24A0A0C4DH33 117 aa5.5□□□□□ -1.53
SRFBP1-201ENST00000339397 M0R381 172 aa5.5□□□□□ -1.53
SRFBP1-201ENST00000339397 ID1P41134 155 aa5.5□□□□□ -1.53
SRFBP1-201ENST00000339397 GATD1Q8NB37 220 aa5.5□□□□□ -1.53
SRFBP1-201ENST00000339397 CNFNQ9BYD5 112 aa5.5□□□□□ -1.53
SRFBP1-201ENST00000339397 A0A0J9YX75 114 aa5.5□□□□□ -1.53
SRFBP1-201ENST00000339397 INAFM1C9JVW0 142 aa5.5□□□□□ -1.53
SRFBP1-201ENST00000339397 RNASE3P12724 160 aaKnown RBP5.5□□□□□ -1.53
SRFBP1-201ENST00000339397 RPS20P60866 119 aaKnown RBP5.5□□□□□ -1.53
SRFBP1-201ENST00000339397 PKIAP61925 76 aa5.5□□□□□ -1.53
SRFBP1-201ENST00000339397 APRG1Q8IVJ8 170 aa5.5□□□□□ -1.53
SRFBP1-201ENST00000339397 PRELID3AQ96N28 172 aa5.5□□□□□ -1.53
SRFBP1-201ENST00000339397 TRAV21A0A0B4J279 112 aa5.49□□□□□ -1.53
SRFBP1-201ENST00000339397 KLLNB2CW77 178 aa5.49□□□□□ -1.53
SRFBP1-201ENST00000339397 CKS2P33552 79 aa5.49□□□□□ -1.53
SRFBP1-201ENST00000339397 DEFB131AP59861 70 aa5.49□□□□□ -1.53
SRFBP1-201ENST00000339397 SNRPD3P62318 126 aaKnown RBP5.49□□□□□ -1.53
SRFBP1-201ENST00000339397 CD300EQ496F6 205 aaPredicted RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms