RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 KHDC3LQ587J8 217 aa10.59□□□□□ -0.71
LINC01116-202ENST00000339037 WFDC10BQ8IUB3 73 aa10.59□□□□□ -0.71
LINC01116-202ENST00000339037 PCNPQ8WW12 178 aaKnown RBP10.59□□□□□ -0.71
LINC01116-202ENST00000339037 WFDC1Q9HC57 220 aa10.59□□□□□ -0.71
LINC01116-202ENST00000339037 RBAKDNA6NC62 111 aa10.58□□□□□ -0.72
LINC01116-202ENST00000339037 K7EQD1 137 aa10.58□□□□□ -0.72
LINC01116-202ENST00000339037 SCGB1C1Q8TD33 95 aa10.58□□□□□ -0.72
LINC01116-202ENST00000339037 TRBV7-9A0A0J9YWB2 115 aa10.57□□□□□ -0.72
LINC01116-202ENST00000339037 SFTA3P0C7M3 94 aa10.57□□□□□ -0.72
LINC01116-202ENST00000339037 GCSHP23434 173 aa10.57□□□□□ -0.72
LINC01116-202ENST00000339037 CSN1S1P47710 185 aa10.57□□□□□ -0.72
LINC01116-202ENST00000339037 MUC21Q5SSG8 566 aa10.57□□□□□ -0.72
LINC01116-202ENST00000339037 ZNF479Q96JC4 524 aa10.57□□□□□ -0.72
LINC01116-202ENST00000339037 DIRC3C9JPN6 131 aa10.56□□□□□ -0.72
LINC01116-202ENST00000339037 ORM1P02763 201 aa10.56□□□□□ -0.72
LINC01116-202ENST00000339037 SMR3BP02814 79 aaPredicted RBP10.56□□□□□ -0.72
LINC01116-202ENST00000339037 GYPEP15421 78 aa10.56□□□□□ -0.72
LINC01116-202ENST00000339037 TAS2R45P59539 299 aa10.56□□□□□ -0.72
LINC01116-202ENST00000339037 ZNF266Q14584 549 aa10.56□□□□□ -0.72
LINC01116-202ENST00000339037 IQCF2Q8IXL9 164 aa10.56□□□□□ -0.72
LINC01116-202ENST00000339037 OR10G4Q8NGN3 311 aa10.56□□□□□ -0.72
LINC01116-202ENST00000339037 TXNDC17Q9BRA2 123 aa10.56□□□□□ -0.72
LINC01116-202ENST00000339037 MDFICQ9P1T7 246 aa10.56□□□□□ -0.72
LINC01116-202ENST00000339037 ALG5Q9Y673 324 aa10.56□□□□□ -0.72
LINC01116-202ENST00000339037 ZNF561-AS1K7EIQ3 104 aa10.55□□□□□ -0.72
LINC01116-202ENST00000339037 CRYGDP07320 174 aa10.55□□□□□ -0.72
LINC01116-202ENST00000339037 RAB2AP61019 212 aa10.55□□□□□ -0.72
LINC01116-202ENST00000339037 C10orf126Q8N4M7 172 aa10.55□□□□□ -0.72
LINC01116-202ENST00000339037 RASL10AQ92737 203 aa10.55□□□□□ -0.72
LINC01116-202ENST00000339037 HYLS1Q96M11 299 aa10.55□□□□□ -0.72
LINC01116-202ENST00000339037 RPH3ALQ9UNE2 315 aa10.55□□□□□ -0.72
LINC01116-202ENST00000339037 C9JCJ5 164 aa10.54□□□□□ -0.72
LINC01116-202ENST00000339037 TMEM183BQ1AE95 376 aa10.54□□□□□ -0.72
LINC01116-202ENST00000339037 Q6AWC8 147 aa10.54□□□□□ -0.72
LINC01116-202ENST00000339037 TMEM183AQ8IXX5 376 aa10.54□□□□□ -0.72
LINC01116-202ENST00000339037 SPXQ9BT56 116 aa10.54□□□□□ -0.72
LINC01116-202ENST00000339037 TRGV11A0A075B6L2 103 aa10.53□□□□□ -0.72
LINC01116-202ENST00000339037 HMGB3O15347 200 aaKnown RBP10.53□□□□□ -0.72
LINC01116-202ENST00000339037 HAMPP81172 84 aa10.53□□□□□ -0.72
LINC01116-202ENST00000339037 ACOT6Q3I5F7 207 aaPredicted RBP10.53□□□□□ -0.72
LINC01116-202ENST00000339037 FAM159AQ6UWV7 190 aa10.53□□□□□ -0.72
LINC01116-202ENST00000339037 OTORQ9NRC9 128 aa10.53□□□□□ -0.72
LINC01116-202ENST00000339037 LENEPQ9Y5L5 61 aa10.53□□□□□ -0.72
LINC01116-202ENST00000339037 IGLV5-52A0A0A0MRZ9 124 aa10.52□□□□□ -0.73
LINC01116-202ENST00000339037 PGPA6NDG6 321 aa10.52□□□□□ -0.73
LINC01116-202ENST00000339037 PSCAO43653 123 aa10.52□□□□□ -0.73
LINC01116-202ENST00000339037 PQLC2Q6ZP29 291 aa10.52□□□□□ -0.73
LINC01116-202ENST00000339037 Q6ZSN1 163 aa10.52□□□□□ -0.73
LINC01116-202ENST00000339037 TMED6Q8WW62 240 aa10.52□□□□□ -0.73
LINC01116-202ENST00000339037 TRAV8-1A0A0A6YYK1 113 aa10.51□□□□□ -0.73
LINC01116-202ENST00000339037 TRAV4A0A0B4J268 109 aa10.51□□□□□ -0.73
LINC01116-202ENST00000339037 A0A1W2PPV4 95 aa10.51□□□□□ -0.73
LINC01116-202ENST00000339037 GNG5P63218 68 aa10.51□□□□□ -0.73
LINC01116-202ENST00000339037 GOLT1AQ6ZVE7 132 aa10.51□□□□□ -0.73
LINC01116-202ENST00000339037 SH2D6Q7Z4S9 175 aa10.51□□□□□ -0.73
LINC01116-202ENST00000339037 NHLRC2Q8NBF2 726 aa10.51□□□□□ -0.73
LINC01116-202ENST00000339037 OR10G9Q8NGN4 311 aa10.51□□□□□ -0.73
LINC01116-202ENST00000339037 OR10G7Q8NGN6 311 aa10.51□□□□□ -0.73
LINC01116-202ENST00000339037 CMTM2Q8TAZ6 248 aa10.51□□□□□ -0.73
LINC01116-202ENST00000339037 TMEM70Q9BUB7 260 aa10.51□□□□□ -0.73
LINC01116-202ENST00000339037 BATF3Q9NR55 127 aa10.51□□□□□ -0.73
LINC01116-202ENST00000339037 NAGKQ9UJ70 344 aa10.51□□□□□ -0.73
LINC01116-202ENST00000339037 DNAH8Q96JB1 4490 aa10.51□□□□□ -0.73
LINC01116-202ENST00000339037 IGHV3-38A0A0C4DH36 116 aa10.5□□□□□ -0.73
LINC01116-202ENST00000339037 ARL14EPLP0DKL9 152 aa10.5□□□□□ -0.73
LINC01116-202ENST00000339037 FAM74A1Q5RGS3 127 aa10.5□□□□□ -0.73
LINC01116-202ENST00000339037 HSD17B11Q8NBQ5 300 aa10.5□□□□□ -0.73
LINC01116-202ENST00000339037 OR4C5Q8NGB2 326 aa10.5□□□□□ -0.73
LINC01116-202ENST00000339037 NTN5Q8WTR8 489 aaPredicted RBP10.5□□□□□ -0.73
LINC01116-202ENST00000339037 TVP23CQ96ET8 276 aa10.5□□□□□ -0.73
LINC01116-202ENST00000339037 LOC100131303A0A0U1RQF7 123 aa10.49□□□□□ -0.73
LINC01116-202ENST00000339037 F6UZH7 168 aa10.49□□□□□ -0.73
LINC01116-202ENST00000339037 PTTG1O95997 202 aa10.49□□□□□ -0.73
LINC01116-202ENST00000339037 CDC34P49427 236 aaPredicted RBP10.49□□□□□ -0.73
LINC01116-202ENST00000339037 PPT1P50897 306 aa10.49□□□□□ -0.73
LINC01116-202ENST00000339037 TDRG1Q3Y452 100 aa10.49□□□□□ -0.73
LINC01116-202ENST00000339037 SCO2A0A1W2PP80 73 aa10.48□□□□□ -0.73
LINC01116-202ENST00000339037 LRCOL1A6NCL2 159 aa10.48□□□□□ -0.73
LINC01116-202ENST00000339037 M0R2P5 195 aa10.48□□□□□ -0.73
LINC01116-202ENST00000339037 GNRH2O43555 120 aa10.48□□□□□ -0.73
LINC01116-202ENST00000339037 STAG3L2P0CL84 134 aa10.48□□□□□ -0.73
LINC01116-202ENST00000339037 STAG3L3P0CL85 134 aa10.48□□□□□ -0.73
LINC01116-202ENST00000339037 TIRAPP58753 221 aa10.48□□□□□ -0.73
LINC01116-202ENST00000339037 LINC01556Q5JQF7 62 aa10.48□□□□□ -0.73
LINC01116-202ENST00000339037 OR2G3Q8NGZ4 309 aa10.48□□□□□ -0.73
LINC01116-202ENST00000339037 SGK494Q96LW2 274 aa10.48□□□□□ -0.73
LINC01116-202ENST00000339037 AQP10Q96PS8 301 aa10.48□□□□□ -0.73
LINC01116-202ENST00000339037 MED28Q9H204 178 aa10.48□□□□□ -0.73
LINC01116-202ENST00000339037 ATP6V0CP27449 155 aa10.47□□□□□ -0.73
LINC01116-202ENST00000339037 Q5BKY6 102 aa10.47□□□□□ -0.73
LINC01116-202ENST00000339037 ARL6IP6Q8N6S5 226 aa10.47□□□□□ -0.73
LINC01116-202ENST00000339037 PSMG3Q9BT73 122 aaPredicted RBP10.47□□□□□ -0.73
LINC01116-202ENST00000339037 Q9HAA7 133 aa10.47□□□□□ -0.73
LINC01116-202ENST00000339037 TREM1Q9NP99 234 aa10.47□□□□□ -0.73
LINC01116-202ENST00000339037 TRAV21A0A0B4J279 112 aa10.46□□□□□ -0.73
LINC01116-202ENST00000339037 IGHV3-16A0A0C4DH30 117 aa10.46□□□□□ -0.73
LINC01116-202ENST00000339037 TYMSP04818 313 aa10.46□□□□□ -0.73
LINC01116-202ENST00000339037 GATA1P15976 413 aaPredicted RBP10.46□□□□□ -0.73
LINC01116-202ENST00000339037 Q8N814 137 aa10.46□□□□□ -0.73
LINC01116-202ENST00000339037 RAB24Q969Q5 203 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms