RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 TCTEX1D4Q5JR98 221 aa12.22□□□□□ -0.45
SCNN1A-202ENST00000338748 KLHDC1Q8N7A1 406 aa12.22□□□□□ -0.45
SCNN1A-202ENST00000338748 RNF185Q96GF1 192 aa12.22□□□□□ -0.45
SCNN1A-202ENST00000338748 LENEPQ9Y5L5 61 aa12.22□□□□□ -0.45
SCNN1A-202ENST00000338748 SPRY2O43597 315 aa12.21□□□□□ -0.45
SCNN1A-202ENST00000338748 AGRNO00468 2067 aa12.21□□□□□ -0.46
SCNN1A-202ENST00000338748 A0A1B0GV90 55 aa12.21□□□□□ -0.46
SCNN1A-202ENST00000338748 WFDC12Q8WWY7 111 aa12.21□□□□□ -0.46
SCNN1A-202ENST00000338748 PRELID3AQ96N28 172 aa12.21□□□□□ -0.46
SCNN1A-202ENST00000338748 TMEM191AQ9H0A3 160 aa12.21□□□□□ -0.46
SCNN1A-202ENST00000338748 LOC389332A0A1B0GUA5 103 aa12.2□□□□□ -0.46
SCNN1A-202ENST00000338748 ZNF688P0C7X2 276 aa12.2□□□□□ -0.46
SCNN1A-202ENST00000338748 IFI27P40305 119 aaPredicted RBP12.2□□□□□ -0.46
SCNN1A-202ENST00000338748 SLURP1P55000 103 aa12.2□□□□□ -0.46
SCNN1A-202ENST00000338748 ADAMTSL5Q6ZMM2 481 aa12.2□□□□□ -0.46
SCNN1A-202ENST00000338748 ATOH7Q8N100 152 aa12.2□□□□□ -0.46
SCNN1A-202ENST00000338748 ORMDL3Q8N138 153 aa12.2□□□□□ -0.46
SCNN1A-202ENST00000338748 DUX3Q96PT4 197 aa12.2□□□□□ -0.46
SCNN1A-202ENST00000338748 ESM1Q9NQ30 184 aa12.2□□□□□ -0.46
SCNN1A-202ENST00000338748 NOTCH2Q04721 2471 aa12.2□□□□□ -0.46
SCNN1A-202ENST00000338748 NIPBLQ6KC79 2804 aaeCLIP12.2□□□□□ -0.46
SCNN1A-202ENST00000338748 DNAJC9-AS1A6NH13 148 aa12.19□□□□□ -0.46
SCNN1A-202ENST00000338748 H3BVH4 76 aa12.19□□□□□ -0.46
SCNN1A-202ENST00000338748 NPYP01303 97 aa12.19□□□□□ -0.46
SCNN1A-202ENST00000338748 RAB4AP20338 218 aa12.19□□□□□ -0.46
SCNN1A-202ENST00000338748 DMRTA1Q5VZB9 504 aa12.19□□□□□ -0.46
SCNN1A-202ENST00000338748 SIGLEC8Q9NYZ4 499 aa12.19□□□□□ -0.46
SCNN1A-202ENST00000338748 EVI2AP22794 236 aa12.18□□□□□ -0.46
SCNN1A-202ENST00000338748 RNASE4P34096 147 aaKnown RBP12.18□□□□□ -0.46
SCNN1A-202ENST00000338748 Q6ZSV7 163 aa12.18□□□□□ -0.46
SCNN1A-202ENST00000338748 VAMP8Q9BV40 100 aa12.18□□□□□ -0.46
SCNN1A-202ENST00000338748 LGALS9O00182 355 aa12.18□□□□□ -0.46
SCNN1A-202ENST00000338748 CKS2P33552 79 aa12.18□□□□□ -0.46
SCNN1A-202ENST00000338748 MAJINQ3KP22 176 aa12.18□□□□□ -0.46
SCNN1A-202ENST00000338748 PSMG4Q5JS54 123 aa12.18□□□□□ -0.46
SCNN1A-202ENST00000338748 AP5S1Q9NUS5 200 aa12.18□□□□□ -0.46
SCNN1A-202ENST00000338748 TIMM8BQ9Y5J9 83 aaPredicted RBP12.18□□□□□ -0.46
SCNN1A-202ENST00000338748 A0A096LNJ9 63 aa12.17□□□□□ -0.46
SCNN1A-202ENST00000338748 BTF3P20290 206 aaKnown RBP12.17□□□□□ -0.46
SCNN1A-202ENST00000338748 APRG1Q8IVJ8 170 aa12.17□□□□□ -0.46
SCNN1A-202ENST00000338748 PRSS3P2Q8NHM4 247 aa12.17□□□□□ -0.46
SCNN1A-202ENST00000338748 TRAV21A0A0B4J279 112 aa12.17□□□□□ -0.46
SCNN1A-202ENST00000338748 SNAI2O43623 268 aa12.17□□□□□ -0.46
SCNN1A-202ENST00000338748 LEPROTL1O95214 131 aa12.17□□□□□ -0.46
SCNN1A-202ENST00000338748 GATA1P15976 413 aaPredicted RBP12.17□□□□□ -0.46
SCNN1A-202ENST00000338748 ANXA2RQ3ZCQ2 193 aa12.17□□□□□ -0.46
SCNN1A-202ENST00000338748 LINC00469Q8N7U9 141 aa12.17□□□□□ -0.46
SCNN1A-202ENST00000338748 K7EQG2 157 aa12.16□□□□□ -0.46
SCNN1A-202ENST00000338748 OR5AL1P0C617 328 aa12.16□□□□□ -0.46
SCNN1A-202ENST00000338748 ID1P41134 155 aa12.16□□□□□ -0.46
SCNN1A-202ENST00000338748 KHDC1LQ5JSQ8 128 aa12.16□□□□□ -0.46
SCNN1A-202ENST00000338748 EREGO14944 169 aa12.15□□□□□ -0.46
SCNN1A-202ENST00000338748 FXYD7P58549 80 aa12.15□□□□□ -0.46
SCNN1A-202ENST00000338748 FA2HQ7L5A8 372 aa12.15□□□□□ -0.46
SCNN1A-202ENST00000338748 TMEM86BQ8N661 226 aa12.15□□□□□ -0.46
SCNN1A-202ENST00000338748 OR11H1Q8NG94 326 aa12.15□□□□□ -0.46
SCNN1A-202ENST00000338748 C20orf144Q9BQM9 153 aa12.15□□□□□ -0.46
SCNN1A-202ENST00000338748 C2orf88Q9BSF0 95 aa12.15□□□□□ -0.46
SCNN1A-202ENST00000338748 TMEM70Q9BUB7 260 aa12.15□□□□□ -0.46
SCNN1A-202ENST00000338748 MCRIP2Q9BUT9 160 aaKnown RBP12.15□□□□□ -0.46
SCNN1A-202ENST00000338748 OTOGQ6ZRI0 2925 aa12.15□□□□□ -0.46
SCNN1A-202ENST00000338748 WNK1Q9H4A3 2382 aa12.15□□□□□ -0.47
SCNN1A-202ENST00000338748 KLLNB2CW77 178 aa12.14□□□□□ -0.47
SCNN1A-202ENST00000338748 IGKV3-20P01619 116 aa12.14□□□□□ -0.47
SCNN1A-202ENST00000338748 ZNF705AQ6ZN79 300 aaPredicted RBP12.14□□□□□ -0.47
SCNN1A-202ENST00000338748 TRAV26-2A0A0B4J265 109 aa12.14□□□□□ -0.47
SCNN1A-202ENST00000338748 GNRH2O43555 120 aa12.14□□□□□ -0.47
SCNN1A-202ENST00000338748 SPANXN1Q5VSR9 72 aa12.14□□□□□ -0.47
SCNN1A-202ENST00000338748 FOXC2Q99958 501 aa12.14□□□□□ -0.47
SCNN1A-202ENST00000338748 SNHG12Q9BXW3 62 aa12.14□□□□□ -0.47
SCNN1A-202ENST00000338748 SYS1-DBNDD2H3BUS1 97 aa12.13□□□□□ -0.47
SCNN1A-202ENST00000338748 LBHQ53QV2 105 aaPredicted RBP12.13□□□□□ -0.47
SCNN1A-202ENST00000338748 C11orf44Q8N8P7 122 aa12.13□□□□□ -0.47
SCNN1A-202ENST00000338748 YAE1D1Q9NRH1 226 aa12.13□□□□□ -0.47
SCNN1A-202ENST00000338748 MUC4Q99102 2169 aa12.13□□□□□ -0.47
SCNN1A-202ENST00000338748 IGHV4-4A0A075B6R2 117 aa12.13□□□□□ -0.47
SCNN1A-202ENST00000338748 TRBV7-9A0A0J9YWB2 115 aa12.13□□□□□ -0.47
SCNN1A-202ENST00000338748 CRXO43186 299 aaPredicted RBP12.13□□□□□ -0.47
SCNN1A-202ENST00000338748 CD5LO43866 347 aa12.13□□□□□ -0.47
SCNN1A-202ENST00000338748 SPATA45Q537H7 98 aa12.13□□□□□ -0.47
SCNN1A-202ENST00000338748 SAMD13Q5VXD3 122 aa12.13□□□□□ -0.47
SCNN1A-202ENST00000338748 C4orf3Q8WVX3 66 aa12.13□□□□□ -0.47
SCNN1A-202ENST00000338748 A0A0J9YX75 114 aa12.12□□□□□ -0.47
SCNN1A-202ENST00000338748 LINC01619G3V211 115 aa12.12□□□□□ -0.47
SCNN1A-202ENST00000338748 M0R381 172 aa12.12□□□□□ -0.47
SCNN1A-202ENST00000338748 RNASE3P12724 160 aaKnown RBP12.12□□□□□ -0.47
SCNN1A-202ENST00000338748 KLHL30-AS1Q8NEE0 82 aa12.12□□□□□ -0.47
SCNN1A-202ENST00000338748 H0Y8G0 127 aa12.11□□□□□ -0.47
SCNN1A-202ENST00000338748 TCF21O43680 179 aa12.11□□□□□ -0.47
SCNN1A-202ENST00000338748 SNRPD3P62318 126 aaKnown RBP12.11□□□□□ -0.47
SCNN1A-202ENST00000338748 TRAV12-2A0A075B6T6 113 aa12.11□□□□□ -0.47
SCNN1A-202ENST00000338748 TNFRSF6BO95407 300 aa12.11□□□□□ -0.47
SCNN1A-202ENST00000338748 DLX4Q92988 240 aaPredicted RBP12.11□□□□□ -0.47
SCNN1A-202ENST00000338748 MIEN1Q9BRT3 115 aa12.11□□□□□ -0.47
SCNN1A-202ENST00000338748 TRAV12-3A0A0B4J271 114 aa12.1□□□□□ -0.47
SCNN1A-202ENST00000338748 S100A4P26447 101 aaKnown RBP12.1□□□□□ -0.47
SCNN1A-202ENST00000338748 ASIPP42127 132 aa12.1□□□□□ -0.47
SCNN1A-202ENST00000338748 ZNF747Q9BV97 191 aa12.1□□□□□ -0.47
SCNN1A-202ENST00000338748 M0R143 59 aa12.1□□□□□ -0.47
SCNN1A-202ENST00000338748 TEX29Q8N6K0 151 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms