RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 IGHV3-16A0A0C4DH30 117 aa10.61□□□□□ -0.71
PRKN-201ENST00000338468 KANTRA0A1W2PQU2 76 aa10.61□□□□□ -0.71
PRKN-201ENST00000338468 M0R2N4 97 aa10.61□□□□□ -0.71
PRKN-201ENST00000338468 Q6ZR54 194 aa10.61□□□□□ -0.71
PRKN-201ENST00000338468 PRNTQ86SH4 94 aa10.61□□□□□ -0.71
PRKN-201ENST00000338468 IGLV2-18A0A075B6J9 118 aa10.6□□□□□ -0.71
PRKN-201ENST00000338468 TRGV11A0A075B6L2 103 aa10.6□□□□□ -0.71
PRKN-201ENST00000338468 H3BNG1 76 aa10.6□□□□□ -0.71
PRKN-201ENST00000338468 K7EQM0 130 aa10.6□□□□□ -0.71
PRKN-201ENST00000338468 TYMSP04818 313 aa10.6□□□□□ -0.71
PRKN-201ENST00000338468 TCTE3Q8IZS6 198 aa10.6□□□□□ -0.71
PRKN-201ENST00000338468 MBD3L1Q8WWY6 194 aa10.6□□□□□ -0.71
PRKN-201ENST00000338468 NDFIP1Q9BT67 221 aa10.6□□□□□ -0.71
PRKN-201ENST00000338468 LINC00588Q9Y4M8 146 aa10.6□□□□□ -0.71
PRKN-201ENST00000338468 UMAD1C9J7I0 102 aa10.59□□□□□ -0.71
PRKN-201ENST00000338468 PEX7O00628 323 aa10.59□□□□□ -0.71
PRKN-201ENST00000338468 GCGP01275 180 aa10.59□□□□□ -0.71
PRKN-201ENST00000338468 IFNA7P01567 189 aa10.59□□□□□ -0.71
PRKN-201ENST00000338468 IGHV3-53P01767 116 aa10.59□□□□□ -0.71
PRKN-201ENST00000338468 LGALSLQ3ZCW2 172 aaPredicted RBP10.59□□□□□ -0.71
PRKN-201ENST00000338468 ZNRF2Q8NHG8 242 aa10.59□□□□□ -0.71
PRKN-201ENST00000338468 FAM213BQ8TBF2 198 aa10.59□□□□□ -0.71
PRKN-201ENST00000338468 RASL10AQ92737 203 aa10.59□□□□□ -0.71
PRKN-201ENST00000338468 SPXQ9BT56 116 aa10.59□□□□□ -0.71
PRKN-201ENST00000338468 FBLL1A6NHQ2 334 aaKnown RBP10.58□□□□□ -0.72
PRKN-201ENST00000338468 PFN1P07737 140 aaKnown RBP10.58□□□□□ -0.72
PRKN-201ENST00000338468 FAM3BP58499 235 aaPredicted RBP10.58□□□□□ -0.72
PRKN-201ENST00000338468 FHL2Q14192 279 aa10.58□□□□□ -0.72
PRKN-201ENST00000338468 SMUG1Q53HV7 270 aa10.58□□□□□ -0.72
PRKN-201ENST00000338468 STOML3Q8TAV4 291 aa10.58□□□□□ -0.72
PRKN-201ENST00000338468 NKX6-2Q9C056 277 aaPredicted RBP10.58□□□□□ -0.72
PRKN-201ENST00000338468 ARL2-SNX15V9GYD0 113 aa10.58□□□□□ -0.72
PRKN-201ENST00000338468 A0A096LPF7 62 aa10.57□□□□□ -0.72
PRKN-201ENST00000338468 RTL8CO15255 209 aa10.57□□□□□ -0.72
PRKN-201ENST00000338468 PFDN1O60925 122 aa10.57□□□□□ -0.72
PRKN-201ENST00000338468 SAPCD1Q5SSQ6 148 aa10.57□□□□□ -0.72
PRKN-201ENST00000338468 Q86TA4 180 aa10.57□□□□□ -0.72
PRKN-201ENST00000338468 SFT2D1Q8WV19 159 aa10.57□□□□□ -0.72
PRKN-201ENST00000338468 HIST1H2BAQ96A08 127 aa10.57□□□□□ -0.72
PRKN-201ENST00000338468 KCNS1Q96KK3 526 aa10.57□□□□□ -0.72
PRKN-201ENST00000338468 SDF2L1Q9HCN8 221 aa10.57□□□□□ -0.72
PRKN-201ENST00000338468 PKD1P98161 4303 aa10.57□□□□□ -0.72
PRKN-201ENST00000338468 A0A1B0GVY2 172 aa10.56□□□□□ -0.72
PRKN-201ENST00000338468 SFTA3P0C7M3 94 aa10.56□□□□□ -0.72
PRKN-201ENST00000338468 TPT1P13693 172 aaKnown RBP10.56□□□□□ -0.72
PRKN-201ENST00000338468 CCL18P55774 89 aa10.56□□□□□ -0.72
PRKN-201ENST00000338468 EIF5AP63241 154 aaKnown RBP10.56□□□□□ -0.72
PRKN-201ENST00000338468 ESRGQ1W209 222 aa10.56□□□□□ -0.72
PRKN-201ENST00000338468 DPPA3Q6W0C5 159 aa10.56□□□□□ -0.72
PRKN-201ENST00000338468 ZNF479Q96JC4 524 aa10.56□□□□□ -0.72
PRKN-201ENST00000338468 A0A1B0GV50 99 aa10.55□□□□□ -0.72
PRKN-201ENST00000338468 M0R2P5 195 aa10.55□□□□□ -0.72
PRKN-201ENST00000338468 PAGE4O60829 102 aa10.55□□□□□ -0.72
PRKN-201ENST00000338468 C1QBP02746 253 aa10.55□□□□□ -0.72
PRKN-201ENST00000338468 CRYBA4P53673 196 aa10.55□□□□□ -0.72
PRKN-201ENST00000338468 CST9LP1Q5W188 147 aa10.55□□□□□ -0.72
PRKN-201ENST00000338468 IGKV3D-20A0A0C4DH25 116 aa10.54□□□□□ -0.72
PRKN-201ENST00000338468 PAX4O43316 350 aa10.54□□□□□ -0.72
PRKN-201ENST00000338468 CRIP1P50238 77 aa10.54□□□□□ -0.72
PRKN-201ENST00000338468 PPT1P50897 306 aa10.54□□□□□ -0.72
PRKN-201ENST00000338468 ZFP69Q49AA0 526 aa10.54□□□□□ -0.72
PRKN-201ENST00000338468 COX8CQ7Z4L0 72 aa10.54□□□□□ -0.72
PRKN-201ENST00000338468 ZC2HC1AQ96GY0 325 aa10.54□□□□□ -0.72
PRKN-201ENST00000338468 C9orf85Q96MD7 179 aa10.54□□□□□ -0.72
PRKN-201ENST00000338468 PRO0255Q9UI72 69 aa10.54□□□□□ -0.72
PRKN-201ENST00000338468 hCG_2014768A0A024R1R8 64 aa10.53□□□□□ -0.72
PRKN-201ENST00000338468 TRBV6-1A0A0K0K1D8 114 aa10.53□□□□□ -0.72
PRKN-201ENST00000338468 H2AFB1P0C5Y9 115 aa10.53□□□□□ -0.72
PRKN-201ENST00000338468 RNASE3P12724 160 aaKnown RBP10.53□□□□□ -0.72
PRKN-201ENST00000338468 TCEAL7Q9BRU2 100 aa10.53□□□□□ -0.72
PRKN-201ENST00000338468 HHLA3Q9XRX5 114 aa10.53□□□□□ -0.72
PRKN-201ENST00000338468 TRAV4A0A0B4J268 109 aa10.52□□□□□ -0.73
PRKN-201ENST00000338468 PRSS29PA6NIE9 313 aa10.52□□□□□ -0.73
PRKN-201ENST00000338468 CCL20P78556 96 aa10.52□□□□□ -0.73
PRKN-201ENST00000338468 SLAQ13239 276 aa10.52□□□□□ -0.73
PRKN-201ENST00000338468 ZNF575Q86XF7 245 aa10.52□□□□□ -0.73
PRKN-201ENST00000338468 FMC1Q96HJ9 113 aa10.52□□□□□ -0.73
PRKN-201ENST00000338468 UPK3BQ9BT76 320 aa10.52□□□□□ -0.73
PRKN-201ENST00000338468 ZFP30Q9Y2G7 519 aa10.52□□□□□ -0.73
PRKN-201ENST00000338468 DNAH11Q96DT5 4516 aa10.52□□□□□ -0.73
PRKN-201ENST00000338468 ABCA13Q86UQ4 5058 aa10.51□□□□□ -0.73
PRKN-201ENST00000338468 DYNC1H1Q14204 4646 aaKnown RBP10.51□□□□□ -0.73
PRKN-201ENST00000338468 TRGV4A0A0C4DH28 118 aa10.51□□□□□ -0.73
PRKN-201ENST00000338468 NBDYA0A0U1RRE5 68 aa10.51□□□□□ -0.73
PRKN-201ENST00000338468 FABP5P3A8MUU1 101 aa10.51□□□□□ -0.73
PRKN-201ENST00000338468 LTAP01374 205 aa10.51□□□□□ -0.73
PRKN-201ENST00000338468 AKAP14Q86UN6 197 aa10.51□□□□□ -0.73
PRKN-201ENST00000338468 Q9H8V8 135 aa10.51□□□□□ -0.73
PRKN-201ENST00000338468 MRPS16Q9Y3D3 137 aaKnown RBP10.51□□□□□ -0.73
PRKN-201ENST00000338468 ICOSQ9Y6W8 199 aa10.51□□□□□ -0.73
PRKN-201ENST00000338468 TRAV1-1A0A0B4J248 108 aa10.5□□□□□ -0.73
PRKN-201ENST00000338468 SCO2A0A1W2PP80 73 aa10.5□□□□□ -0.73
PRKN-201ENST00000338468 SH2D1AO60880 128 aa10.5□□□□□ -0.73
PRKN-201ENST00000338468 AKR1C3P42330 323 aa10.5□□□□□ -0.73
PRKN-201ENST00000338468 ZNF876PQ49A33 203 aa10.5□□□□□ -0.73
PRKN-201ENST00000338468 OR4C5Q8NGB2 326 aa10.5□□□□□ -0.73
PRKN-201ENST00000338468 PTH2Q96A98 100 aa10.5□□□□□ -0.73
PRKN-201ENST00000338468 KRTAP1-5Q9BYS1 174 aa10.5□□□□□ -0.73
PRKN-201ENST00000338468 PGPEP1LA6NFU8 196 aa10.49□□□□□ -0.73
PRKN-201ENST00000338468 C9JCJ5 164 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms