RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 IGHV7-4-1A0A0J9YVY3 117 aa6.7□□□□□ -1.34
SNCA-201ENST00000336904 FBLL1A6NHQ2 334 aaKnown RBP6.7□□□□□ -1.34
SNCA-201ENST00000336904 NDUFS8O00217 210 aa6.7□□□□□ -1.34
SNCA-201ENST00000336904 HOXA3O43365 443 aaPredicted RBP6.7□□□□□ -1.34
SNCA-201ENST00000336904 PRM2P04554 102 aa6.7□□□□□ -1.34
SNCA-201ENST00000336904 HTN1P15515 57 aa6.7□□□□□ -1.34
SNCA-201ENST00000336904 JPT2Q9H910 190 aa6.7□□□□□ -1.34
SNCA-201ENST00000336904 DKK2Q9UBU2 259 aa6.7□□□□□ -1.34
SNCA-201ENST00000336904 U3KQE9 123 aa6.7□□□□□ -1.34
SNCA-201ENST00000336904 FASNP49327 2511 aaKnown RBP6.7□□□□□ -1.34
SNCA-201ENST00000336904 TNFRSF6BO95407 300 aa6.69□□□□□ -1.34
SNCA-201ENST00000336904 MGPP08493 103 aa6.69□□□□□ -1.34
SNCA-201ENST00000336904 S100A4P26447 101 aaKnown RBP6.69□□□□□ -1.34
SNCA-201ENST00000336904 MPV17L2Q567V2 206 aa6.69□□□□□ -1.34
SNCA-201ENST00000336904 ZNF493Q6ZR52 646 aa6.69□□□□□ -1.34
SNCA-201ENST00000336904 C14orf178Q8N769 122 aaPredicted RBP6.69□□□□□ -1.34
SNCA-201ENST00000336904 LEPP41159 167 aa6.69□□□□□ -1.34
SNCA-201ENST00000336904 ZNF124Q15973 351 aa6.69□□□□□ -1.34
SNCA-201ENST00000336904 ANXA2RQ3ZCQ2 193 aa6.69□□□□□ -1.34
SNCA-201ENST00000336904 ANKRD39Q53RE8 183 aa6.69□□□□□ -1.34
SNCA-201ENST00000336904 Q6AWC8 147 aa6.69□□□□□ -1.34
SNCA-201ENST00000336904 PSMG3-AS1Q96PY0 264 aa6.69□□□□□ -1.34
SNCA-201ENST00000336904 MUC4Q99102 2169 aa6.69□□□□□ -1.34
SNCA-201ENST00000336904 PSMG4Q5JS54 123 aa6.68□□□□□ -1.34
SNCA-201ENST00000336904 Q5PR19 223 aa6.68□□□□□ -1.34
SNCA-201ENST00000336904 LINC01356Q8N9X3 169 aa6.68□□□□□ -1.34
SNCA-201ENST00000336904 OR10J6PQ8NGY7 276 aa6.68□□□□□ -1.34
SNCA-201ENST00000336904 Q96MF0 132 aa6.68□□□□□ -1.34
SNCA-201ENST00000336904 NACAE9PAV3 2078 aa6.68□□□□□ -1.34
SNCA-201ENST00000336904 TRAV12-3A0A0B4J271 114 aa6.68□□□□□ -1.34
SNCA-201ENST00000336904 NDUFA4O00483 81 aa6.68□□□□□ -1.34
SNCA-201ENST00000336904 LINC01559Q495D7 138 aa6.68□□□□□ -1.34
SNCA-201ENST00000336904 ZFAND2AQ8N6M9 145 aa6.68□□□□□ -1.34
SNCA-201ENST00000336904 KLHDC1Q8N7A1 406 aa6.68□□□□□ -1.34
SNCA-201ENST00000336904 TMEM190Q8WZ59 177 aa6.68□□□□□ -1.34
SNCA-201ENST00000336904 RPL39LQ96EH5 51 aaKnown RBP6.68□□□□□ -1.34
SNCA-201ENST00000336904 TMEM208Q9BTX3 173 aa6.68□□□□□ -1.34
SNCA-201ENST00000336904 TMEM191AQ9H0A3 160 aa6.68□□□□□ -1.34
SNCA-201ENST00000336904 HSPB8Q9UJY1 196 aa6.68□□□□□ -1.34
SNCA-201ENST00000336904 K7EMI3 77 aa6.68□□□□□ -1.34
SNCA-201ENST00000336904 PEF1Q9UBV8 284 aaKnown RBP6.68□□□□□ -1.34
SNCA-201ENST00000336904 C20orf202A1L168 122 aa6.67□□□□□ -1.34
SNCA-201ENST00000336904 NUDT3O95989 172 aa6.67□□□□□ -1.34
SNCA-201ENST00000336904 TMEM158Q8WZ71 300 aa6.67□□□□□ -1.34
SNCA-201ENST00000336904 LINC00477Q96M19 166 aa6.67□□□□□ -1.34
SNCA-201ENST00000336904 NAA38Q9BRA0 125 aaKnown RBP6.67□□□□□ -1.34
SNCA-201ENST00000336904 DAZ1Q9NQZ3 744 aaKnown RBP6.67□□□□□ -1.34
SNCA-201ENST00000336904 KLK9Q9UKQ9 250 aa6.67□□□□□ -1.34
SNCA-201ENST00000336904 IGHV4OR15-8A0A075B7B6 117 aa6.67□□□□□ -1.34
SNCA-201ENST00000336904 A0A087WW49 117 aa6.67□□□□□ -1.34
SNCA-201ENST00000336904 A0A096LNT2 108 aa6.67□□□□□ -1.34
SNCA-201ENST00000336904 HSBP1L1C9JCN9 74 aa6.67□□□□□ -1.34
SNCA-201ENST00000336904 SOCS3O14543 225 aa6.67□□□□□ -1.34
SNCA-201ENST00000336904 TCF21O43680 179 aa6.67□□□□□ -1.34
SNCA-201ENST00000336904 IGLV1-40P01703 118 aa6.67□□□□□ -1.34
SNCA-201ENST00000336904 NMUP48645 174 aa6.67□□□□□ -1.34
SNCA-201ENST00000336904 C9orf47Q6ZRZ4 202 aa6.67□□□□□ -1.34
SNCA-201ENST00000336904 C9orf139Q6ZV77 190 aa6.67□□□□□ -1.34
SNCA-201ENST00000336904 GOLT1BQ9Y3E0 138 aa6.67□□□□□ -1.34
SNCA-201ENST00000336904 C2CD3Q4AC94 2353 aa6.67□□□□□ -1.34
SNCA-201ENST00000336904 A0A087WWL8 130 aa6.66□□□□□ -1.34
SNCA-201ENST00000336904 SLURP1P55000 103 aa6.66□□□□□ -1.34
SNCA-201ENST00000336904 RPS20P60866 119 aaKnown RBP6.66□□□□□ -1.34
SNCA-201ENST00000336904 MAP1LC3AQ9H492 121 aa6.66□□□□□ -1.34
SNCA-201ENST00000336904 A0A1W2PRX2 142 aa6.66□□□□□ -1.34
SNCA-201ENST00000336904 CBY3A6NI87 242 aa6.66□□□□□ -1.34
SNCA-201ENST00000336904 HBDP02042 147 aa6.66□□□□□ -1.34
SNCA-201ENST00000336904 IGHV4-31P0DP07 118 aa6.66□□□□□ -1.34
SNCA-201ENST00000336904 FAM74A4Q5TZK3 123 aa6.66□□□□□ -1.34
SNCA-201ENST00000336904 IFI27L1Q96BM0 104 aa6.66□□□□□ -1.34
SNCA-201ENST00000336904 U3KQK5 164 aa6.66□□□□□ -1.34
SNCA-201ENST00000336904 GCN1Q92616 2671 aaKnown RBP6.66□□□□□ -1.34
SNCA-201ENST00000336904 C7orf71A4D174 169 aa6.66□□□□□ -1.34
SNCA-201ENST00000336904 CRXO43186 299 aaPredicted RBP6.66□□□□□ -1.34
SNCA-201ENST00000336904 PRSS1P07477 247 aa6.66□□□□□ -1.34
SNCA-201ENST00000336904 PSMB8P28062 276 aa6.66□□□□□ -1.34
SNCA-201ENST00000336904 SPINK13Q1W4C9 94 aa6.66□□□□□ -1.34
SNCA-201ENST00000336904 PCP2Q8IVA1 136 aa6.66□□□□□ -1.34
SNCA-201ENST00000336904 USMG5Q96IX5 58 aa6.66□□□□□ -1.34
SNCA-201ENST00000336904 SMPXQ9UHP9 88 aa6.66□□□□□ -1.34
SNCA-201ENST00000336904 PHLDA3Q9Y5J5 127 aa6.66□□□□□ -1.34
SNCA-201ENST00000336904 A0A1B0GW15 77 aa6.65□□□□□ -1.34
SNCA-201ENST00000336904 RBAKDNA6NC62 111 aa6.65□□□□□ -1.34
SNCA-201ENST00000336904 S100A7P31151 101 aa6.65□□□□□ -1.34
SNCA-201ENST00000336904 CFHR3Q02985 330 aa6.65□□□□□ -1.34
SNCA-201ENST00000336904 COL5A1-AS1Q5SY13 56 aa6.65□□□□□ -1.34
SNCA-201ENST00000336904 LINC01545Q5VT33 79 aa6.65□□□□□ -1.34
SNCA-201ENST00000336904 COX8CQ7Z4L0 72 aa6.65□□□□□ -1.34
SNCA-201ENST00000336904 WFDC11Q8NEX6 87 aa6.65□□□□□ -1.34
SNCA-201ENST00000336904 FOXC2Q99958 501 aa6.65□□□□□ -1.34
SNCA-201ENST00000336904 LBHQ53QV2 105 aaPredicted RBP6.65□□□□□ -1.35
SNCA-201ENST00000336904 SLC25A34Q6PIV7 304 aa6.65□□□□□ -1.35
SNCA-201ENST00000336904 PET117Q6UWS5 81 aa6.65□□□□□ -1.35
SNCA-201ENST00000336904 GATD1Q8NB37 220 aa6.65□□□□□ -1.35
SNCA-201ENST00000336904 OR2K2Q8NGT1 345 aa6.65□□□□□ -1.35
SNCA-201ENST00000336904 MS4A6AQ9H2W1 248 aa6.65□□□□□ -1.35
SNCA-201ENST00000336904 SETXQ7Z333 2677 aaKnown RBP6.65□□□□□ -1.35
SNCA-201ENST00000336904 A0A0G2JLM5 398 aa6.64□□□□□ -1.35
SNCA-201ENST00000336904 TMEM8BA6NDV4 472 aa6.64□□□□□ -1.35
SNCA-201ENST00000336904 SCRT2Q9NQ03 307 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms