RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 FAM162BQ5T6X4 162 aa9.59□□□□□ -0.87
LIMK1-201ENST00000336180 PRR9Q5T870 116 aa9.59□□□□□ -0.87
LIMK1-201ENST00000336180 LYPD1Q8N2G4 141 aa9.59□□□□□ -0.87
LIMK1-201ENST00000336180 RHPN1-AS1Q9BWJ2 59 aa9.59□□□□□ -0.87
LIMK1-201ENST00000336180 NPFFR1Q9GZQ6 430 aa9.59□□□□□ -0.87
LIMK1-201ENST00000336180 GPX1P07203 203 aa9.59□□□□□ -0.87
LIMK1-201ENST00000336180 TCTAP57738 103 aa9.59□□□□□ -0.87
LIMK1-201ENST00000336180 PAFAH1B2P68402 229 aa9.59□□□□□ -0.87
LIMK1-201ENST00000336180 FAM106AQ4KMX7 169 aa9.59□□□□□ -0.87
LIMK1-201ENST00000336180 URB1-AS1Q96HZ7 61 aa9.59□□□□□ -0.87
LIMK1-201ENST00000336180 PMCHL2Q9BQD1 86 aa9.59□□□□□ -0.87
LIMK1-201ENST00000336180 PDZD2O15018 2839 aa9.59□□□□□ -0.87
LIMK1-201ENST00000336180 A0A1B0GUT8 65 aa9.58□□□□□ -0.88
LIMK1-201ENST00000336180 FAM223BA6NKX1 122 aa9.58□□□□□ -0.88
LIMK1-201ENST00000336180 GPHB5Q86YW7 130 aa9.58□□□□□ -0.88
LIMK1-201ENST00000336180 FAM223AQ8IWN6 122 aa9.58□□□□□ -0.88
LIMK1-201ENST00000336180 KCNS1Q96KK3 526 aa9.58□□□□□ -0.88
LIMK1-201ENST00000336180 DSCR9P59020 149 aa9.58□□□□□ -0.88
LIMK1-201ENST00000336180 HIST1H1AQ02539 215 aaPredicted RBP9.58□□□□□ -0.88
LIMK1-201ENST00000336180 TWIST1Q15672 202 aa9.58□□□□□ -0.88
LIMK1-201ENST00000336180 FER1L6-AS1Q8NA97 138 aa9.58□□□□□ -0.88
LIMK1-201ENST00000336180 TP73-AS1Q9UF72 201 aa9.58□□□□□ -0.88
LIMK1-201ENST00000336180 NPIPB6E9PJ23 425 aa9.58□□□□□ -0.88
LIMK1-201ENST00000336180 M0R2Z0 102 aa9.58□□□□□ -0.88
LIMK1-201ENST00000336180 SCGB1A1P11684 91 aa9.58□□□□□ -0.88
LIMK1-201ENST00000336180 SYNJ2BPP57105 145 aa9.58□□□□□ -0.88
LIMK1-201ENST00000336180 JMJD1CQ15652 2540 aa9.57□□□□□ -0.88
LIMK1-201ENST00000336180 ZNF324O75467 553 aaPredicted RBP9.57□□□□□ -0.88
LIMK1-201ENST00000336180 Q0VG73 95 aa9.57□□□□□ -0.88
LIMK1-201ENST00000336180 SIGMAR1Q99720 223 aa9.57□□□□□ -0.88
LIMK1-201ENST00000336180 ESDP10768 282 aa9.57□□□□□ -0.88
LIMK1-201ENST00000336180 SRSF2Q01130 221 aaKnown RBP9.57□□□□□ -0.88
LIMK1-201ENST00000336180 GATA1P15976 413 aaPredicted RBP9.56□□□□□ -0.88
LIMK1-201ENST00000336180 KRTAP1-3Q8IUG1 177 aa9.56□□□□□ -0.88
LIMK1-201ENST00000336180 RPS20P60866 119 aaKnown RBP9.56□□□□□ -0.88
LIMK1-201ENST00000336180 TMEM78Q5T7P6 136 aa9.56□□□□□ -0.88
LIMK1-201ENST00000336180 VCX2Q9H322 139 aa9.56□□□□□ -0.88
LIMK1-201ENST00000336180 AKAP9Q99996 3911 aa9.56□□□□□ -0.88
LIMK1-201ENST00000336180 A0A1W2PRX2 142 aa9.56□□□□□ -0.88
LIMK1-201ENST00000336180 C3orf79P0CE67 100 aa9.56□□□□□ -0.88
LIMK1-201ENST00000336180 EVI2AP22794 236 aa9.56□□□□□ -0.88
LIMK1-201ENST00000336180 LOXL1Q08397 574 aaPredicted RBP9.56□□□□□ -0.88
LIMK1-201ENST00000336180 TEX43Q6ZNM6 134 aa9.56□□□□□ -0.88
LIMK1-201ENST00000336180 SPATA12Q7Z6I5 190 aa9.56□□□□□ -0.88
LIMK1-201ENST00000336180 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.55□□□□□ -0.88
LIMK1-201ENST00000336180 D6R8Y8 96 aa9.55□□□□□ -0.88
LIMK1-201ENST00000336180 TSPAN13O95857 204 aa9.55□□□□□ -0.88
LIMK1-201ENST00000336180 ZNF688P0C7X2 276 aa9.55□□□□□ -0.88
LIMK1-201ENST00000336180 ZNF575Q86XF7 245 aa9.55□□□□□ -0.88
LIMK1-201ENST00000336180 SMR3AQ99954 134 aa9.55□□□□□ -0.88
LIMK1-201ENST00000336180 NDFIP1Q9BT67 221 aa9.55□□□□□ -0.88
LIMK1-201ENST00000336180 PEF1Q9UBV8 284 aaKnown RBP9.55□□□□□ -0.88
LIMK1-201ENST00000336180 IGLV1-40P01703 118 aa9.55□□□□□ -0.88
LIMK1-201ENST00000336180 IGKV3D-20A0A0C4DH25 116 aa9.54□□□□□ -0.88
LIMK1-201ENST00000336180 EBLN2Q6P2I7 272 aa9.54□□□□□ -0.88
LIMK1-201ENST00000336180 KMT2BQ9UMN6 2715 aaPredicted RBP9.54□□□□□ -0.88
LIMK1-201ENST00000336180 IGHV4OR15-8A0A075B7B6 117 aa9.54□□□□□ -0.88
LIMK1-201ENST00000336180 A0A087WW49 117 aa9.54□□□□□ -0.88
LIMK1-201ENST00000336180 RPL32P62910 135 aaKnown RBP9.54□□□□□ -0.88
LIMK1-201ENST00000336180 OR10J3Q5JRS4 329 aa9.54□□□□□ -0.88
LIMK1-201ENST00000336180 VPREB3Q9UKI3 123 aa9.54□□□□□ -0.88
LIMK1-201ENST00000336180 TRAV26-2A0A0B4J265 109 aa9.54□□□□□ -0.88
LIMK1-201ENST00000336180 RIGQ13278 110 aa9.54□□□□□ -0.88
LIMK1-201ENST00000336180 OR4B1Q8NGF8 309 aa9.54□□□□□ -0.88
LIMK1-201ENST00000336180 OR10AG1Q8NH19 301 aa9.54□□□□□ -0.88
LIMK1-201ENST00000336180 UFC1Q9Y3C8 167 aa9.54□□□□□ -0.88
LIMK1-201ENST00000336180 NDUFA4O00483 81 aa9.53□□□□□ -0.88
LIMK1-201ENST00000336180 RNASE4P34096 147 aaKnown RBP9.53□□□□□ -0.88
LIMK1-201ENST00000336180 SLURP1P55000 103 aa9.53□□□□□ -0.88
LIMK1-201ENST00000336180 CT83Q5H943 113 aa9.53□□□□□ -0.88
LIMK1-201ENST00000336180 TMEM190Q8WZ59 177 aa9.53□□□□□ -0.88
LIMK1-201ENST00000336180 BORCS7Q96B45 105 aa9.53□□□□□ -0.88
LIMK1-201ENST00000336180 UQCR10Q9UDW1 63 aa9.53□□□□□ -0.88
LIMK1-201ENST00000336180 U3KQE9 123 aa9.53□□□□□ -0.88
LIMK1-201ENST00000336180 H3BVH4 76 aa9.53□□□□□ -0.88
LIMK1-201ENST00000336180 PSMB8P28062 276 aa9.53□□□□□ -0.88
LIMK1-201ENST00000336180 SPATA45Q537H7 98 aa9.53□□□□□ -0.88
LIMK1-201ENST00000336180 ATP5L2Q7Z4Y8 100 aa9.53□□□□□ -0.88
LIMK1-201ENST00000336180 ZNF702PQ9H963 129 aa9.53□□□□□ -0.88
LIMK1-201ENST00000336180 FABP5P3A8MUU1 101 aa9.52□□□□□ -0.88
LIMK1-201ENST00000336180 HAX1O00165 279 aa9.52□□□□□ -0.88
LIMK1-201ENST00000336180 IFI27P40305 119 aaPredicted RBP9.52□□□□□ -0.88
LIMK1-201ENST00000336180 CFHR3Q02985 330 aa9.52□□□□□ -0.88
LIMK1-201ENST00000336180 USMG5Q96IX5 58 aa9.52□□□□□ -0.88
LIMK1-201ENST00000336180 SLC50A1Q9BRV3 221 aa9.52□□□□□ -0.88
LIMK1-201ENST00000336180 TRAV12-2A0A075B6T6 113 aa9.52□□□□□ -0.89
LIMK1-201ENST00000336180 IGHV7-4-1A0A0J9YVY3 117 aa9.52□□□□□ -0.89
LIMK1-201ENST00000336180 A0A0G2JLM5 398 aa9.52□□□□□ -0.89
LIMK1-201ENST00000336180 PLA2G2AP14555 144 aa9.52□□□□□ -0.89
LIMK1-201ENST00000336180 Q6YL49 198 aa9.52□□□□□ -0.89
LIMK1-201ENST00000336180 DAZ1Q9NQZ3 744 aaKnown RBP9.52□□□□□ -0.89
LIMK1-201ENST00000336180 IGHV1-24A0A0C4DH33 117 aa9.51□□□□□ -0.89
LIMK1-201ENST00000336180 CRIP2P52943 208 aaPredicted RBP9.51□□□□□ -0.89
LIMK1-201ENST00000336180 Q8N976 141 aa9.51□□□□□ -0.89
LIMK1-201ENST00000336180 GFRA4Q9GZZ7 299 aa9.51□□□□□ -0.89
LIMK1-201ENST00000336180 FN1P02751 2386 aaKnown RBP9.51□□□□□ -0.89
LIMK1-201ENST00000336180 A0A087X0K7 114 aa9.51□□□□□ -0.89
LIMK1-201ENST00000336180 M0R381 172 aa9.51□□□□□ -0.89
LIMK1-201ENST00000336180 HTN1P15515 57 aa9.51□□□□□ -0.89
LIMK1-201ENST00000336180 COX19Q49B96 90 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms