RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 K7EP34 96 aa9.4□□□□□ -0.91
VPS33B-201ENST00000333371 SIVA1O15304 175 aa9.4□□□□□ -0.91
VPS33B-201ENST00000333371 RIPPLY3P57055 190 aa9.4□□□□□ -0.91
VPS33B-201ENST00000333371 UNQ9165/PRO28630Q6UXU0 137 aa9.4□□□□□ -0.91
VPS33B-201ENST00000333371 MAPKAPK5-AS1Q8N8E1 139 aa9.4□□□□□ -0.91
VPS33B-201ENST00000333371 DEFB104AQ8WTQ1 72 aa9.4□□□□□ -0.91
VPS33B-201ENST00000333371 EEF1AKMT3Q96AZ1 226 aa9.4□□□□□ -0.91
VPS33B-201ENST00000333371 C16orf92Q96LL3 132 aa9.4□□□□□ -0.91
VPS33B-201ENST00000333371 CCL19Q99731 98 aa9.4□□□□□ -0.91
VPS33B-201ENST00000333371 UTP20O75691 2785 aaKnown RBP9.39□□□□□ -0.91
VPS33B-201ENST00000333371 MUC4Q99102 2169 aa9.39□□□□□ -0.91
VPS33B-201ENST00000333371 TRBV25-1A0A075B6N4 114 aa9.39□□□□□ -0.91
VPS33B-201ENST00000333371 RBAKDNA6NC62 111 aa9.39□□□□□ -0.91
VPS33B-201ENST00000333371 BRD3OSQ6XYD6 125 aa9.39□□□□□ -0.91
VPS33B-201ENST00000333371 CHAC1Q9BUX1 264 aa9.39□□□□□ -0.91
VPS33B-201ENST00000333371 DOPEY2Q9Y3R5 2298 aa9.39□□□□□ -0.91
VPS33B-201ENST00000333371 A0A1W2PPM0 123 aa9.39□□□□□ -0.91
VPS33B-201ENST00000333371 GTF2H5Q6ZYL4 71 aa9.39□□□□□ -0.91
VPS33B-201ENST00000333371 C5orf56Q8N8D9 126 aa9.39□□□□□ -0.91
VPS33B-201ENST00000333371 SPCS1Q9Y6A9 102 aa9.39□□□□□ -0.91
VPS33B-201ENST00000333371 M0R381 172 aa9.38□□□□□ -0.91
VPS33B-201ENST00000333371 DPM2O94777 84 aa9.38□□□□□ -0.91
VPS33B-201ENST00000333371 PIMREGQ9BSJ6 248 aa9.38□□□□□ -0.91
VPS33B-201ENST00000333371 F6UB75 175 aa9.38□□□□□ -0.91
VPS33B-201ENST00000333371 NPFFO15130 113 aa9.38□□□□□ -0.91
VPS33B-201ENST00000333371 LCNL1Q6ZST4 164 aa9.38□□□□□ -0.91
VPS33B-201ENST00000333371 GLMPQ8WWB7 406 aa9.38□□□□□ -0.91
VPS33B-201ENST00000333371 RAB9AP51151 201 aa9.37□□□□□ -0.91
VPS33B-201ENST00000333371 ATP5G2Q06055 141 aa9.37□□□□□ -0.91
VPS33B-201ENST00000333371 LAGE3Q14657 143 aa9.37□□□□□ -0.91
VPS33B-201ENST00000333371 IGSF10Q6WRI0 2623 aa9.37□□□□□ -0.91
VPS33B-201ENST00000333371 CFAP46Q8IYW2 2715 aa9.37□□□□□ -0.91
VPS33B-201ENST00000333371 NPFFR1Q9GZQ6 430 aa9.37□□□□□ -0.91
VPS33B-201ENST00000333371 NHP2Q9NX24 153 aaKnown RBP9.37□□□□□ -0.91
VPS33B-201ENST00000333371 IGHV3-11P01762 117 aa9.37□□□□□ -0.91
VPS33B-201ENST00000333371 CLEC2AQ6UVW9 174 aa9.37□□□□□ -0.91
VPS33B-201ENST00000333371 C9orf47Q6ZRZ4 202 aa9.37□□□□□ -0.91
VPS33B-201ENST00000333371 K7ERU9 68 aa9.36□□□□□ -0.91
VPS33B-201ENST00000333371 SMIM15Q7Z3B0 74 aa9.36□□□□□ -0.91
VPS33B-201ENST00000333371 GPHB5Q86YW7 130 aa9.36□□□□□ -0.91
VPS33B-201ENST00000333371 RPL39LQ96EH5 51 aaKnown RBP9.36□□□□□ -0.91
VPS33B-201ENST00000333371 U3KQE9 123 aa9.36□□□□□ -0.91
VPS33B-201ENST00000333371 PRSS47A8MTI9 375 aa9.36□□□□□ -0.91
VPS33B-201ENST00000333371 SMIM13P0DJ93 91 aa9.36□□□□□ -0.91
VPS33B-201ENST00000333371 SAMD5Q5TGI4 173 aa9.36□□□□□ -0.91
VPS33B-201ENST00000333371 MYOZ3Q8TDC0 251 aa9.36□□□□□ -0.91
VPS33B-201ENST00000333371 FLNCQ14315 2725 aa9.36□□□□□ -0.91
VPS33B-201ENST00000333371 TRBV7-1A0A0A6YYK4 115 aa9.35□□□□□ -0.91
VPS33B-201ENST00000333371 TRAV41A0A0B4J266 112 aa9.35□□□□□ -0.91
VPS33B-201ENST00000333371 LY6EQ16553 131 aa9.35□□□□□ -0.91
VPS33B-201ENST00000333371 ATP5J2P56134 94 aa9.35□□□□□ -0.91
VPS33B-201ENST00000333371 RPL11P62913 178 aaKnown RBP9.35□□□□□ -0.91
VPS33B-201ENST00000333371 C14orf178Q8N769 122 aaPredicted RBP9.35□□□□□ -0.91
VPS33B-201ENST00000333371 HIF1ANQ9NWT6 349 aa9.35□□□□□ -0.91
VPS33B-201ENST00000333371 ATP5LO75964 103 aa9.35□□□□□ -0.91
VPS33B-201ENST00000333371 SRD5A1P18405 259 aa9.35□□□□□ -0.91
VPS33B-201ENST00000333371 ARL3P36405 182 aa9.35□□□□□ -0.91
VPS33B-201ENST00000333371 PIFOQ8TCI5 191 aa9.35□□□□□ -0.91
VPS33B-201ENST00000333371 EDN2P20800 178 aa9.34□□□□□ -0.91
VPS33B-201ENST00000333371 WFDC12Q8WWY7 111 aa9.34□□□□□ -0.91
VPS33B-201ENST00000333371 CHTOPQ9Y3Y2 248 aaKnown RBP9.34□□□□□ -0.91
VPS33B-201ENST00000333371 DOPEY1Q5JWR5 2465 aa9.34□□□□□ -0.91
VPS33B-201ENST00000333371 ZANQ9Y493 2812 aa9.34□□□□□ -0.91
VPS33B-201ENST00000333371 IGHV4-61A0A0C4DH41 118 aa9.34□□□□□ -0.91
VPS33B-201ENST00000333371 FABP2P12104 132 aa9.34□□□□□ -0.91
VPS33B-201ENST00000333371 KLK9Q2XQG4 91 aa9.34□□□□□ -0.91
VPS33B-201ENST00000333371 NEGR1Q7Z3B1 354 aa9.34□□□□□ -0.91
VPS33B-201ENST00000333371 ZFAND2AQ8N6M9 145 aa9.34□□□□□ -0.91
VPS33B-201ENST00000333371 PHLDA1Q8WV24 401 aaPredicted RBP9.34□□□□□ -0.91
VPS33B-201ENST00000333371 KLK9Q9UKQ9 250 aa9.34□□□□□ -0.91
VPS33B-201ENST00000333371 A0A087WX48 190 aa9.33□□□□□ -0.92
VPS33B-201ENST00000333371 GNRH2O43555 120 aa9.33□□□□□ -0.92
VPS33B-201ENST00000333371 MGPP08493 103 aa9.33□□□□□ -0.92
VPS33B-201ENST00000333371 Q6ZS46 218 aa9.33□□□□□ -0.92
VPS33B-201ENST00000333371 CEND1Q8N111 149 aa9.33□□□□□ -0.92
VPS33B-201ENST00000333371 RASL10AQ92737 203 aa9.33□□□□□ -0.92
VPS33B-201ENST00000333371 SMIM2Q9BVW6 85 aa9.33□□□□□ -0.92
VPS33B-201ENST00000333371 HIGD1BQ9P298 99 aa9.33□□□□□ -0.92
VPS33B-201ENST00000333371 CUBNO60494 3623 aa9.33□□□□□ -0.92
VPS33B-201ENST00000333371 MYO18BQ8IUG5 2567 aa9.33□□□□□ -0.92
VPS33B-201ENST00000333371 SRSF1Q07955 248 aaKnown RBP eCLIP9.33□□□□□ -0.92
VPS33B-201ENST00000333371 ANXA2RQ3ZCQ2 193 aa9.33□□□□□ -0.92
VPS33B-201ENST00000333371 C10orf105Q8TEF2 133 aa9.33□□□□□ -0.92
VPS33B-201ENST00000333371 S100A4P26447 101 aaKnown RBP9.32□□□□□ -0.92
VPS33B-201ENST00000333371 RNASE4P34096 147 aaKnown RBP9.32□□□□□ -0.92
VPS33B-201ENST00000333371 USP9XQ93008 2570 aaPredicted RBP9.32□□□□□ -0.92
VPS33B-201ENST00000333371 NDUFS8O00217 210 aa9.32□□□□□ -0.92
VPS33B-201ENST00000333371 MTURNQ8N3F0 131 aa9.32□□□□□ -0.92
VPS33B-201ENST00000333371 MRPL53Q96EL3 112 aaKnown RBP9.32□□□□□ -0.92
VPS33B-201ENST00000333371 CSTL1Q9H114 145 aa9.32□□□□□ -0.92
VPS33B-201ENST00000333371 MOB4Q9Y3A3 225 aa9.32□□□□□ -0.92
VPS33B-201ENST00000333371 CENPEQ02224 2701 aa9.31□□□□□ -0.92
VPS33B-201ENST00000333371 IGHV4-4A0A075B6R2 117 aa9.31□□□□□ -0.92
VPS33B-201ENST00000333371 G3V4G9 280 aa9.31□□□□□ -0.92
VPS33B-201ENST00000333371 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.31□□□□□ -0.92
VPS33B-201ENST00000333371 SMPXQ9UHP9 88 aa9.31□□□□□ -0.92
VPS33B-201ENST00000333371 IGHV1-69DA0A0B4J2H0 117 aa9.31□□□□□ -0.92
VPS33B-201ENST00000333371 IGHV1-69P01742 117 aa9.31□□□□□ -0.92
VPS33B-201ENST00000333371 IGHV4-38-2P0DP08 117 aa9.31□□□□□ -0.92
VPS33B-201ENST00000333371 C19orf54Q5BKX5 351 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms