RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 MDFICQ9P1T7 246 aa19.26■□□□□ 0.67
ATPAF1-201ENST00000329231 DNAH10Q8IVF4 4471 aa19.25■□□□□ 0.67
ATPAF1-201ENST00000329231 LINC00336Q6ZUF6 198 aa19.25■□□□□ 0.67
ATPAF1-201ENST00000329231 CYB561D1Q8N8Q1 229 aa19.25■□□□□ 0.67
ATPAF1-201ENST00000329231 SPXQ9BT56 116 aa19.25■□□□□ 0.67
ATPAF1-201ENST00000329231 PSG8Q9UQ74 426 aa19.25■□□□□ 0.67
ATPAF1-201ENST00000329231 FRAS1Q86XX4 4008 aa19.24■□□□□ 0.67
ATPAF1-201ENST00000329231 FBLL1A6NHQ2 334 aaKnown RBP19.24■□□□□ 0.67
ATPAF1-201ENST00000329231 IFNA7P01567 189 aa19.24■□□□□ 0.67
ATPAF1-201ENST00000329231 RAB5CP51148 216 aa19.24■□□□□ 0.67
ATPAF1-201ENST00000329231 Q6ZR54 194 aa19.24■□□□□ 0.67
ATPAF1-201ENST00000329231 H2AFB1P0C5Y9 115 aa19.23■□□□□ 0.67
ATPAF1-201ENST00000329231 FLI1Q01543 452 aaPredicted RBP19.23■□□□□ 0.67
ATPAF1-201ENST00000329231 TMEM75Q8N9X5 138 aa19.23■□□□□ 0.67
ATPAF1-201ENST00000329231 LINC00588Q9Y4M8 146 aa19.23■□□□□ 0.67
ATPAF1-201ENST00000329231 ARL2-SNX15V9GYD0 113 aa19.23■□□□□ 0.67
ATPAF1-201ENST00000329231 NACAE9PAV3 2078 aa19.23■□□□□ 0.67
ATPAF1-201ENST00000329231 KCNS1Q96KK3 526 aa19.22■□□□□ 0.67
ATPAF1-201ENST00000329231 IGLV2-11P01706 119 aa19.21■□□□□ 0.67
ATPAF1-201ENST00000329231 PRNTQ86SH4 94 aa19.21■□□□□ 0.67
ATPAF1-201ENST00000329231 ZNRF2Q8NHG8 242 aa19.21■□□□□ 0.67
ATPAF1-201ENST00000329231 SDF2L1Q9HCN8 221 aa19.21■□□□□ 0.67
ATPAF1-201ENST00000329231 IGHV3-53P01767 116 aa19.2■□□□□ 0.66
ATPAF1-201ENST00000329231 RASL10AQ92737 203 aa19.2■□□□□ 0.66
ATPAF1-201ENST00000329231 HIST1H2BAQ96A08 127 aa19.2■□□□□ 0.66
ATPAF1-201ENST00000329231 VSIG2Q96IQ7 327 aa19.2■□□□□ 0.66
ATPAF1-201ENST00000329231 C8orf49Q96NF6 230 aa19.2■□□□□ 0.66
ATPAF1-201ENST00000329231 A0A1B0GV50 99 aa19.19■□□□□ 0.66
ATPAF1-201ENST00000329231 PEX7O00628 323 aa19.19■□□□□ 0.66
ATPAF1-201ENST00000329231 GNRH2O43555 120 aa19.19■□□□□ 0.66
ATPAF1-201ENST00000329231 SULT1A2P50226 295 aa19.19■□□□□ 0.66
ATPAF1-201ENST00000329231 SLAQ13239 276 aa19.19■□□□□ 0.66
ATPAF1-201ENST00000329231 SAPCD1Q5SSQ6 148 aa19.19■□□□□ 0.66
ATPAF1-201ENST00000329231 CST9LP1Q5W188 147 aa19.19■□□□□ 0.66
ATPAF1-201ENST00000329231 MUC4Q99102 2169 aa19.19■□□□□ 0.66
ATPAF1-201ENST00000329231 IGHV3-16A0A0C4DH30 117 aa19.18■□□□□ 0.66
ATPAF1-201ENST00000329231 PPT1P50897 306 aa19.18■□□□□ 0.66
ATPAF1-201ENST00000329231 SMUG1Q53HV7 270 aa19.18■□□□□ 0.66
ATPAF1-201ENST00000329231 TCEAL7Q9BRU2 100 aa19.18■□□□□ 0.66
ATPAF1-201ENST00000329231 PAX4O43316 350 aa19.17■□□□□ 0.66
ATPAF1-201ENST00000329231 PAGE4O60829 102 aa19.17■□□□□ 0.66
ATPAF1-201ENST00000329231 GCGP01275 180 aa19.17■□□□□ 0.66
ATPAF1-201ENST00000329231 TYMSP04818 313 aa19.17■□□□□ 0.66
ATPAF1-201ENST00000329231 SOHLH1Q5JUK2 328 aa19.17■□□□□ 0.66
ATPAF1-201ENST00000329231 PRO0255Q9UI72 69 aa19.17■□□□□ 0.66
ATPAF1-201ENST00000329231 TRAV1-1A0A0B4J248 108 aa19.16■□□□□ 0.66
ATPAF1-201ENST00000329231 RTL8CO15255 209 aa19.16■□□□□ 0.66
ATPAF1-201ENST00000329231 PFN1P07737 140 aaKnown RBP19.16■□□□□ 0.66
ATPAF1-201ENST00000329231 ZNF80P51504 273 aaPredicted RBP19.16■□□□□ 0.66
ATPAF1-201ENST00000329231 LINC00479Q96M42 142 aa19.16■□□□□ 0.66
ATPAF1-201ENST00000329231 A0A096LPF7 62 aa19.15■□□□□ 0.66
ATPAF1-201ENST00000329231 M0R2P5 195 aa19.15■□□□□ 0.66
ATPAF1-201ENST00000329231 FHL2Q14192 279 aa19.15■□□□□ 0.66
ATPAF1-201ENST00000329231 ESRGQ1W209 222 aa19.15■□□□□ 0.66
ATPAF1-201ENST00000329231 HHLA3Q9XRX5 114 aa19.15■□□□□ 0.66
ATPAF1-201ENST00000329231 TRAV34A0A0B4J273 112 aa19.14■□□□□ 0.65
ATPAF1-201ENST00000329231 NBDYA0A0U1RRE5 68 aa19.14■□□□□ 0.65
ATPAF1-201ENST00000329231 C1orf134Q5TEV5 83 aa19.14■□□□□ 0.65
ATPAF1-201ENST00000329231 TRGV4A0A0C4DH28 118 aa19.13■□□□□ 0.65
ATPAF1-201ENST00000329231 TEX46H3BTG2 121 aa19.13■□□□□ 0.65
ATPAF1-201ENST00000329231 Q9H8V8 135 aa19.13■□□□□ 0.65
ATPAF1-201ENST00000329231 ICOSQ9Y6W8 199 aa19.13■□□□□ 0.65
ATPAF1-201ENST00000329231 PRSS29PA6NIE9 313 aa19.12■□□□□ 0.65
ATPAF1-201ENST00000329231 NKX2-5P52952 324 aaPredicted RBP19.12■□□□□ 0.65
ATPAF1-201ENST00000329231 CRYBA4P53673 196 aa19.12■□□□□ 0.65
ATPAF1-201ENST00000329231 ZNF479Q96JC4 524 aa19.12■□□□□ 0.65
ATPAF1-201ENST00000329231 UPK3BQ9BT76 320 aa19.12■□□□□ 0.65
ATPAF1-201ENST00000329231 C11orf21Q9P2W6 132 aa19.12■□□□□ 0.65
ATPAF1-201ENST00000329231 SFTA3P0C7M3 94 aa19.11■□□□□ 0.65
ATPAF1-201ENST00000329231 CCL20P78556 96 aa19.11■□□□□ 0.65
ATPAF1-201ENST00000329231 Q86TA4 180 aa19.11■□□□□ 0.65
ATPAF1-201ENST00000329231 FMC1Q96HJ9 113 aa19.11■□□□□ 0.65
ATPAF1-201ENST00000329231 MRPS16Q9Y3D3 137 aaKnown RBP19.11■□□□□ 0.65
ATPAF1-201ENST00000329231 TRAV4A0A0B4J268 109 aa19.1■□□□□ 0.65
ATPAF1-201ENST00000329231 MANBALQ9NQG1 85 aa19.1■□□□□ 0.65
ATPAF1-201ENST00000329231 UBE2G1P62253 170 aa19.09■□□□□ 0.65
ATPAF1-201ENST00000329231 OR4C5Q8NGB2 326 aa19.09■□□□□ 0.65
ATPAF1-201ENST00000329231 TRBV6-1A0A0K0K1D8 114 aa19.08■□□□□ 0.64
ATPAF1-201ENST00000329231 AKR1C3P42330 323 aa19.08■□□□□ 0.64
ATPAF1-201ENST00000329231 MRPL23Q16540 153 aaKnown RBP19.08■□□□□ 0.64
ATPAF1-201ENST00000329231 GNG13Q9P2W3 67 aa19.08■□□□□ 0.64
ATPAF1-201ENST00000329231 ZFP30Q9Y2G7 519 aa19.07■□□□□ 0.64
ATPAF1-201ENST00000329231 FABP5P3A8MUU1 101 aa19.06■□□□□ 0.64
ATPAF1-201ENST00000329231 TTC32Q5I0X7 151 aa19.06■□□□□ 0.64
ATPAF1-201ENST00000329231 DNAH2Q9P225 4427 aa19.05■□□□□ 0.64
ATPAF1-201ENST00000329231 A0A1B0GVY2 172 aa19.05■□□□□ 0.64
ATPAF1-201ENST00000329231 ZNF876PQ49A33 203 aa19.05■□□□□ 0.64
ATPAF1-201ENST00000329231 ALKAL2Q6UX46 152 aa19.05■□□□□ 0.64
ATPAF1-201ENST00000329231 PCNPQ8WW12 178 aaKnown RBP19.05■□□□□ 0.64
ATPAF1-201ENST00000329231 C9orf85Q96MD7 179 aa19.05■□□□□ 0.64
ATPAF1-201ENST00000329231 SCO2A0A1W2PP80 73 aa19.04■□□□□ 0.64
ATPAF1-201ENST00000329231 C9JCJ5 164 aa19.04■□□□□ 0.64
ATPAF1-201ENST00000329231 ORM1P02763 201 aa19.04■□□□□ 0.64
ATPAF1-201ENST00000329231 S100A9P06702 114 aaKnown RBP19.04■□□□□ 0.64
ATPAF1-201ENST00000329231 COX8CQ7Z4L0 72 aa19.04■□□□□ 0.64
ATPAF1-201ENST00000329231 C6orf223Q8N319 242 aa19.04■□□□□ 0.64
ATPAF1-201ENST00000329231 BOLA1Q9Y3E2 137 aa19.04■□□□□ 0.64
ATPAF1-201ENST00000329231 LTAP01374 205 aa19.03■□□□□ 0.64
ATPAF1-201ENST00000329231 NEGR1Q7Z3B1 354 aa19.03■□□□□ 0.64
ATPAF1-201ENST00000329231 TXNDC17Q9BRA2 123 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms