RNA–Protein interactions for RNA: ENST00000326004.4

HMGB1-201, Transcript of high mobility group box 1, humanhuman

TSL 3 BASIC

Gene HMGB1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-201ENST00000326004 RPL22P35268 128 aaKnown RBP1.55□□□□□ -2.16
HMGB1-201ENST00000326004 GLRXP35754 106 aa1.55□□□□□ -2.16
HMGB1-201ENST00000326004 SNCAP37840 140 aa1.55□□□□□ -2.16
HMGB1-201ENST00000326004 LPAR6P43657 344 aa1.55□□□□□ -2.16
HMGB1-201ENST00000326004 TAS2R45P59539 299 aa1.55□□□□□ -2.16
HMGB1-201ENST00000326004 TNFAIP6P98066 277 aaPredicted RBP1.55□□□□□ -2.16
HMGB1-201ENST00000326004 PSG9Q00887 426 aa1.55□□□□□ -2.16
HMGB1-201ENST00000326004 PSG4Q00888 419 aa1.55□□□□□ -2.16
HMGB1-201ENST00000326004 DHRS2Q13268 280 aa1.55□□□□□ -2.16
HMGB1-201ENST00000326004 GTF2H5Q6ZYL4 71 aa1.55□□□□□ -2.16
HMGB1-201ENST00000326004 TOMM5Q8N4H5 51 aa1.55□□□□□ -2.16
HMGB1-201ENST00000326004 KCNRGQ8N5I3 272 aa1.55□□□□□ -2.16
HMGB1-201ENST00000326004 ZNF676Q8N7Q3 588 aa1.55□□□□□ -2.16
HMGB1-201ENST00000326004 OR4D11Q8NGI4 311 aa1.55□□□□□ -2.16
HMGB1-201ENST00000326004 OR4K13Q8NH42 304 aa1.55□□□□□ -2.16
HMGB1-201ENST00000326004 OR4X1Q8NH49 305 aa1.55□□□□□ -2.16
HMGB1-201ENST00000326004 ZNF418Q8TF45 676 aaPredicted RBP1.55□□□□□ -2.16
HMGB1-201ENST00000326004 KLK6Q92876 244 aa1.55□□□□□ -2.16
HMGB1-201ENST00000326004 TMEM106AQ96A25 262 aa1.55□□□□□ -2.16
HMGB1-201ENST00000326004 BTF3L4Q96K17 158 aa1.55□□□□□ -2.16
HMGB1-201ENST00000326004 PSMG3Q9BT73 122 aaPredicted RBP1.55□□□□□ -2.16
HMGB1-201ENST00000326004 UPK3BQ9BT76 320 aa1.55□□□□□ -2.16
HMGB1-201ENST00000326004 EFCAB11Q9BUY7 163 aa1.55□□□□□ -2.16
HMGB1-201ENST00000326004 PBDC1Q9BVG4 233 aa1.55□□□□□ -2.16
HMGB1-201ENST00000326004 RERGLQ9H628 205 aa1.55□□□□□ -2.16
HMGB1-201ENST00000326004 MRPL16Q9NX20 251 aaKnown RBP1.55□□□□□ -2.16
HMGB1-201ENST00000326004 IDI2-AS1Q9NZ38 188 aa1.55□□□□□ -2.16
HMGB1-201ENST00000326004 CCDC167Q9P0B6 97 aa1.55□□□□□ -2.16
HMGB1-201ENST00000326004 UQCR10Q9UDW1 63 aa1.55□□□□□ -2.16
HMGB1-201ENST00000326004 TRAPPC2LQ9UL33 140 aa1.55□□□□□ -2.16
HMGB1-201ENST00000326004 FUT9Q9Y231 359 aa1.55□□□□□ -2.16
HMGB1-201ENST00000326004 ANK2Q01484 3957 aa1.55□□□□□ -2.16
HMGB1-201ENST00000326004 TENM1Q9UKZ4 2725 aa1.55□□□□□ -2.16
HMGB1-201ENST00000326004 ABCA4P78363 2273 aa1.55□□□□□ -2.16
HMGB1-201ENST00000326004 HERC2O95714 4834 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 MYH11P35749 1972 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 CHD3Q12873 2000 aaKnown RBP1.54□□□□□ -2.16
HMGB1-201ENST00000326004 TRAV14DV4A0A0A6YYC5 116 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 A0A0J9YY10 115 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 LOC285095A0A1B0GVY8 99 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 A0A1B0GX78 115 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 A0A1W2PRE2 83 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 IGLC7A0M8Q6 106 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 OR4C46A6NHA9 309 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 ZNF860A6NHJ4 632 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 IFITM5A6NNB3 132 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 BBIP1A8MTZ0 92 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 FABP5P3A8MUU1 101 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 SNRPGP15A8MWD9 76 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 CCDC179H3BU77 68 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 APOC4-APOC2K7ER74 178 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 FXYD1O00168 92 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 LST1O00453 97 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 DEGS1O15121 323 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 PIN1P1O15428 100 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 CREBL2O60519 120 aaPredicted RBP1.54□□□□□ -2.16
HMGB1-201ENST00000326004 HYPMO75409 117 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 C1QAP02745 245 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 IL5P05113 134 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 CRYGDP07320 174 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 IGLC1P0CG04 106 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 TPT1P13693 172 aaKnown RBP1.54□□□□□ -2.16
HMGB1-201ENST00000326004 RPL7P18124 248 aaKnown RBP1.54□□□□□ -2.16
HMGB1-201ENST00000326004 CRYBB3P26998 211 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 TSPEAR-AS2P59090 65 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 RPS25P62851 125 aaKnown RBP1.54□□□□□ -2.16
HMGB1-201ENST00000326004 SELENOWP63302 87 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 HIST1H3AP68431 136 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 H3F3AP84243 136 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 ELOBQ15370 118 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 OR8B8Q15620 311 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 DEFB113Q30KQ7 82 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 GLIPR1L1Q6UWM5 242 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 SLC25A26Q70HW3 274 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 SCXQ7RTU7 201 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 SLC36A1Q7Z2H8 476 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 GPHB5Q86YW7 130 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 SLC22A24Q8N4F4 322 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 OR52R1Q8NGF1 315 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 OR5A2Q8NGI9 324 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 GPR119Q8TDV5 335 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 LMX1AQ8TE12 382 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 THEM6Q8WUY1 208 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 SKA2Q8WVK7 121 aaPredicted RBP1.54□□□□□ -2.16
HMGB1-201ENST00000326004 PSMF1Q92530 271 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 RNASE6Q93091 150 aaKnown RBP1.54□□□□□ -2.16
HMGB1-201ENST00000326004 BORCS7Q96B45 105 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 ZC2HC1AQ96GY0 325 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 TSPAN32Q96QS1 320 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 ULBP3Q9BZM4 244 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 C11orf1Q9H5F2 150 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 POPDC3Q9HBV1 291 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 NPVFQ9HCQ7 196 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 ENY2Q9NPA8 101 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 GPR84Q9NQS5 396 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 NDUFB11Q9NX14 153 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 MED29Q9NX70 200 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 TAAR3PQ9P1P4 343 aa1.54□□□□□ -2.16
HMGB1-201ENST00000326004 MCTS1Q9ULC4 181 aaKnown RBP1.54□□□□□ -2.16
HMGB1-201ENST00000326004 BOKQ9UMX3 212 aaPredicted RBP1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms