RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 HRNRQ86YZ3 2850 aaPredicted RBP13.75□□□□□ -0.21
PRKCB-202ENST00000321728 TRAV12-1A0A0B4J245 112 aa13.74□□□□□ -0.21
PRKCB-202ENST00000321728 LOC107984156A0A0G2JMH3 177 aa13.74□□□□□ -0.21
PRKCB-202ENST00000321728 ARL17AQ8IVW1 177 aa13.74□□□□□ -0.21
PRKCB-202ENST00000321728 RBAKDNA6NC62 111 aa13.74□□□□□ -0.21
PRKCB-202ENST00000321728 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.74□□□□□ -0.21
PRKCB-202ENST00000321728 SCGB1D4Q6XE38 83 aa13.74□□□□□ -0.21
PRKCB-202ENST00000321728 DLX4Q92988 240 aaPredicted RBP13.74□□□□□ -0.21
PRKCB-202ENST00000321728 SMIM2Q9BVW6 85 aa13.74□□□□□ -0.21
PRKCB-202ENST00000321728 TRAV26-1A0A087WT03 109 aa13.73□□□□□ -0.21
PRKCB-202ENST00000321728 LINC01549A6NIU2 74 aa13.73□□□□□ -0.21
PRKCB-202ENST00000321728 LINC01619G3V211 115 aa13.73□□□□□ -0.21
PRKCB-202ENST00000321728 PSMB2P49721 201 aa13.73□□□□□ -0.21
PRKCB-202ENST00000321728 LINC01560Q8TB33 94 aa13.73□□□□□ -0.21
PRKCB-202ENST00000321728 MUC6Q6W4X9 2439 aa13.73□□□□□ -0.21
PRKCB-202ENST00000321728 H3BVH4 76 aa13.73□□□□□ -0.21
PRKCB-202ENST00000321728 BUB3O43684 328 aa13.73□□□□□ -0.21
PRKCB-202ENST00000321728 OR11H6Q8NGC7 330 aa13.73□□□□□ -0.21
PRKCB-202ENST00000321728 GEMIN7Q9H840 131 aaKnown RBP13.73□□□□□ -0.21
PRKCB-202ENST00000321728 IGHV3-49A0A0A0MS15 119 aa13.72□□□□□ -0.21
PRKCB-202ENST00000321728 GRNP28799 593 aaKnown RBP13.72□□□□□ -0.21
PRKCB-202ENST00000321728 SRSF9Q13242 221 aaKnown RBP eCLIP13.72□□□□□ -0.21
PRKCB-202ENST00000321728 CFAP126Q5VTH2 177 aa13.72□□□□□ -0.21
PRKCB-202ENST00000321728 ZNF418Q8TF45 676 aaPredicted RBP13.72□□□□□ -0.21
PRKCB-202ENST00000321728 VKORC1Q9BQB6 163 aa13.72□□□□□ -0.21
PRKCB-202ENST00000321728 ZNF815PA8K554 130 aa13.72□□□□□ -0.21
PRKCB-202ENST00000321728 SMCPP49901 116 aaPredicted RBP13.72□□□□□ -0.21
PRKCB-202ENST00000321728 C8orf86Q6ZUL3 223 aa13.72□□□□□ -0.21
PRKCB-202ENST00000321728 SLC50A1Q9BRV3 221 aa13.72□□□□□ -0.21
PRKCB-202ENST00000321728 PRADC1Q9BSG0 188 aa13.72□□□□□ -0.21
PRKCB-202ENST00000321728 COL6A6A6NMZ7 2263 aa13.71□□□□□ -0.21
PRKCB-202ENST00000321728 SPINK8P0C7L1 97 aa13.71□□□□□ -0.21
PRKCB-202ENST00000321728 ORMDL2Q53FV1 153 aa13.71□□□□□ -0.21
PRKCB-202ENST00000321728 TMEM238LA0A1B0GVL6 79 aa13.71□□□□□ -0.22
PRKCB-202ENST00000321728 A6NJY4 79 aa13.71□□□□□ -0.22
PRKCB-202ENST00000321728 CLEC3BP05452 202 aa13.71□□□□□ -0.22
PRKCB-202ENST00000321728 C15orf32Q32M92 178 aa13.71□□□□□ -0.22
PRKCB-202ENST00000321728 NFE4Q86UQ8 179 aa13.71□□□□□ -0.22
PRKCB-202ENST00000321728 IGF2RP11717 2491 aa13.7□□□□□ -0.22
PRKCB-202ENST00000321728 CD3EP07766 207 aa13.7□□□□□ -0.22
PRKCB-202ENST00000321728 NEXN-AS1Q8NBZ9 246 aa13.7□□□□□ -0.22
PRKCB-202ENST00000321728 CDIP1Q9H305 208 aa13.7□□□□□ -0.22
PRKCB-202ENST00000321728 CELSR1Q9NYQ6 3014 aa13.7□□□□□ -0.22
PRKCB-202ENST00000321728 LY6G5BQ8NDX9 201 aa13.7□□□□□ -0.22
PRKCB-202ENST00000321728 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.69□□□□□ -0.22
PRKCB-202ENST00000321728 J3KRW8 73 aa13.69□□□□□ -0.22
PRKCB-202ENST00000321728 SPRY2O43597 315 aa13.69□□□□□ -0.22
PRKCB-202ENST00000321728 ZFP2Q6ZN57 461 aa13.69□□□□□ -0.22
PRKCB-202ENST00000321728 GLMPQ8WWB7 406 aa13.69□□□□□ -0.22
PRKCB-202ENST00000321728 TOMM6Q96B49 74 aa13.69□□□□□ -0.22
PRKCB-202ENST00000321728 M0R381 172 aa13.69□□□□□ -0.22
PRKCB-202ENST00000321728 CRYBA4P53673 196 aa13.69□□□□□ -0.22
PRKCB-202ENST00000321728 SUMO2P61956 95 aaKnown RBP13.69□□□□□ -0.22
PRKCB-202ENST00000321728 Q8NA96 180 aa13.69□□□□□ -0.22
PRKCB-202ENST00000321728 ATP6V0E2Q8NHE4 81 aa13.69□□□□□ -0.22
PRKCB-202ENST00000321728 PTH2Q96A98 100 aa13.69□□□□□ -0.22
PRKCB-202ENST00000321728 PLEKHB2Q96CS7 222 aa13.69□□□□□ -0.22
PRKCB-202ENST00000321728 ZFAND3Q9H8U3 227 aa13.68□□□□□ -0.22
PRKCB-202ENST00000321728 HIF1ANQ9NWT6 349 aa13.68□□□□□ -0.22
PRKCB-202ENST00000321728 MAP1AP78559 2803 aaPredicted RBP13.68□□□□□ -0.22
PRKCB-202ENST00000321728 TSPAN13O95857 204 aa13.68□□□□□ -0.22
PRKCB-202ENST00000321728 MT-ATP8P03928 68 aa13.68□□□□□ -0.22
PRKCB-202ENST00000321728 SLC25A16P16260 332 aa13.68□□□□□ -0.22
PRKCB-202ENST00000321728 ECSCRQ19T08 205 aa13.68□□□□□ -0.22
PRKCB-202ENST00000321728 MSRB2Q9Y3D2 182 aa13.68□□□□□ -0.22
PRKCB-202ENST00000321728 PTPRQQ9UMZ3 2332 aa13.68□□□□□ -0.22
PRKCB-202ENST00000321728 IGHV4-4A0A075B6R2 117 aa13.67□□□□□ -0.22
PRKCB-202ENST00000321728 FAM90A27PA6NNH2 459 aa13.67□□□□□ -0.22
PRKCB-202ENST00000321728 BAALCQ8WXS3 180 aa13.67□□□□□ -0.22
PRKCB-202ENST00000321728 RPL39LQ96EH5 51 aaKnown RBP13.67□□□□□ -0.22
PRKCB-202ENST00000321728 IGHV7-81A0A0B4J1V7 117 aa13.67□□□□□ -0.22
PRKCB-202ENST00000321728 TRAV8-2A0A0B4J237 113 aa13.67□□□□□ -0.22
PRKCB-202ENST00000321728 PRSS29PA6NIE9 313 aa13.67□□□□□ -0.22
PRKCB-202ENST00000321728 C2orf66Q6UXQ4 117 aa13.67□□□□□ -0.22
PRKCB-202ENST00000321728 KLHL30-AS1Q8NEE0 82 aa13.67□□□□□ -0.22
PRKCB-202ENST00000321728 COL12A1Q99715 3063 aa13.66□□□□□ -0.22
PRKCB-202ENST00000321728 ODF3BA8MYP8 253 aa13.66□□□□□ -0.22
PRKCB-202ENST00000321728 CLEC19AQ6UXS0 136 aa13.66□□□□□ -0.22
PRKCB-202ENST00000321728 SVIPQ8NHG7 77 aa13.66□□□□□ -0.22
PRKCB-202ENST00000321728 RASL10AQ92737 203 aa13.66□□□□□ -0.22
PRKCB-202ENST00000321728 FHL3Q13643 280 aa13.66□□□□□ -0.22
PRKCB-202ENST00000321728 UBE2D1P51668 147 aa13.65□□□□□ -0.22
PRKCB-202ENST00000321728 C14orf178Q8N769 122 aaPredicted RBP13.65□□□□□ -0.22
PRKCB-202ENST00000321728 CLPSL1A2RUU4 121 aa13.65□□□□□ -0.22
PRKCB-202ENST00000321728 MGPP08493 103 aa13.65□□□□□ -0.22
PRKCB-202ENST00000321728 PRTN3P24158 256 aa13.65□□□□□ -0.22
PRKCB-202ENST00000321728 XGP55808 180 aa13.65□□□□□ -0.22
PRKCB-202ENST00000321728 Q6ZUT4 128 aa13.65□□□□□ -0.22
PRKCB-202ENST00000321728 VMO1Q7Z5L0 202 aa13.65□□□□□ -0.22
PRKCB-202ENST00000321728 PRR9Q5T870 116 aa13.64□□□□□ -0.23
PRKCB-202ENST00000321728 S100A4P26447 101 aaKnown RBP13.64□□□□□ -0.23
PRKCB-202ENST00000321728 C9orf47Q6ZRZ4 202 aa13.64□□□□□ -0.23
PRKCB-202ENST00000321728 Q8N6K4 173 aa13.63□□□□□ -0.23
PRKCB-202ENST00000321728 LINC01548A6NM66 108 aa13.63□□□□□ -0.23
PRKCB-202ENST00000321728 TGFAP01135 160 aa13.63□□□□□ -0.23
PRKCB-202ENST00000321728 IGF1P05019 195 aa13.63□□□□□ -0.23
PRKCB-202ENST00000321728 LYRM7Q5U5X0 104 aa13.63□□□□□ -0.23
PRKCB-202ENST00000321728 PPDPFLQ8WWR9 84 aa13.63□□□□□ -0.23
PRKCB-202ENST00000321728 C16orf92Q96LL3 132 aa13.63□□□□□ -0.23
PRKCB-202ENST00000321728 METTL26Q96S19 204 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms