RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 OR11H2Q8NH07 326 aa8.53□□□□□ -1.04
TOP3A-201ENST00000321105 TMEM14CQ9P0S9 112 aa8.53□□□□□ -1.04
TOP3A-201ENST00000321105 TMEM8BA6NDV4 472 aa8.53□□□□□ -1.04
TOP3A-201ENST00000321105 CRYGCP07315 174 aa8.53□□□□□ -1.04
TOP3A-201ENST00000321105 MPV17L2Q567V2 206 aa8.53□□□□□ -1.04
TOP3A-201ENST00000321105 TNFRSF6BO95407 300 aa8.52□□□□□ -1.05
TOP3A-201ENST00000321105 PSMB2P49721 201 aa8.52□□□□□ -1.05
TOP3A-201ENST00000321105 ZNF876PQ49A33 203 aa8.52□□□□□ -1.05
TOP3A-201ENST00000321105 IGF2BP2-AS1Q96M15 143 aa8.52□□□□□ -1.05
TOP3A-201ENST00000321105 PEMTQ9UBM1 199 aa8.52□□□□□ -1.05
TOP3A-201ENST00000321105 SLURP1P55000 103 aa8.52□□□□□ -1.05
TOP3A-201ENST00000321105 HERVK_113P61574 105 aa8.52□□□□□ -1.05
TOP3A-201ENST00000321105 Q0VG73 95 aa8.52□□□□□ -1.05
TOP3A-201ENST00000321105 FAM104BQ5XKR9 115 aa8.52□□□□□ -1.05
TOP3A-201ENST00000321105 C11orf71Q6IPW1 123 aa8.52□□□□□ -1.05
TOP3A-201ENST00000321105 C12orf54Q6X4T0 127 aa8.52□□□□□ -1.05
TOP3A-201ENST00000321105 PHLDA1Q8WV24 401 aaPredicted RBP8.52□□□□□ -1.05
TOP3A-201ENST00000321105 CFHR3Q02985 330 aa8.52□□□□□ -1.05
TOP3A-201ENST00000321105 FAM231DQ6ZW35 169 aa8.52□□□□□ -1.05
TOP3A-201ENST00000321105 A0A1B0GW15 77 aa8.51□□□□□ -1.05
TOP3A-201ENST00000321105 SRSF2Q01130 221 aaKnown RBP8.51□□□□□ -1.05
TOP3A-201ENST00000321105 Q6ZVH6 145 aa8.51□□□□□ -1.05
TOP3A-201ENST00000321105 IGHV1-24A0A0C4DH33 117 aa8.51□□□□□ -1.05
TOP3A-201ENST00000321105 J3QKU1 62 aa8.51□□□□□ -1.05
TOP3A-201ENST00000321105 IGLV2-8P01709 118 aa8.51□□□□□ -1.05
TOP3A-201ENST00000321105 NUTF2P61970 127 aaKnown RBP8.51□□□□□ -1.05
TOP3A-201ENST00000321105 ST20Q9HBF5 79 aa8.51□□□□□ -1.05
TOP3A-201ENST00000321105 C21orf62-AS1Q17RA5 79 aa8.51□□□□□ -1.05
TOP3A-201ENST00000321105 A6NDN8 102 aa8.5□□□□□ -1.05
TOP3A-201ENST00000321105 APOMO95445 188 aa8.5□□□□□ -1.05
TOP3A-201ENST00000321105 HOXD3P31249 432 aaPredicted RBP8.5□□□□□ -1.05
TOP3A-201ENST00000321105 KRTAP10-9P60411 292 aa8.5□□□□□ -1.05
TOP3A-201ENST00000321105 CSTL1Q9H114 145 aa8.5□□□□□ -1.05
TOP3A-201ENST00000321105 ZNF492Q9P255 531 aa8.5□□□□□ -1.05
TOP3A-201ENST00000321105 CHD6Q8TD26 2715 aa8.5□□□□□ -1.05
TOP3A-201ENST00000321105 IGSF10Q6WRI0 2623 aa8.5□□□□□ -1.05
TOP3A-201ENST00000321105 NPIPB6E9PJ23 425 aa8.5□□□□□ -1.05
TOP3A-201ENST00000321105 IGF1P05019 195 aa8.5□□□□□ -1.05
TOP3A-201ENST00000321105 CHCHD1Q96BP2 118 aaKnown RBP8.5□□□□□ -1.05
TOP3A-201ENST00000321105 CCDC140Q96MF4 163 aa8.5□□□□□ -1.05
TOP3A-201ENST00000321105 NXT2Q9NPJ8 142 aaKnown RBP8.5□□□□□ -1.05
TOP3A-201ENST00000321105 SIGLEC8Q9NYZ4 499 aa8.5□□□□□ -1.05
TOP3A-201ENST00000321105 TRGV1A0A0A0MS02 117 aa8.5□□□□□ -1.05
TOP3A-201ENST00000321105 ODF3BA8MYP8 253 aa8.5□□□□□ -1.05
TOP3A-201ENST00000321105 TMEM262E9PQX1 116 aa8.5□□□□□ -1.05
TOP3A-201ENST00000321105 NDUFA4O00483 81 aa8.5□□□□□ -1.05
TOP3A-201ENST00000321105 ZC2HC1BQ5TFG8 222 aa8.5□□□□□ -1.05
TOP3A-201ENST00000321105 APRG1Q8IVJ8 170 aa8.5□□□□□ -1.05
TOP3A-201ENST00000321105 GAGE10A6NGK3 116 aa8.49□□□□□ -1.05
TOP3A-201ENST00000321105 PPBPP02775 128 aa8.49□□□□□ -1.05
TOP3A-201ENST00000321105 ZNF80P51504 273 aaPredicted RBP8.49□□□□□ -1.05
TOP3A-201ENST00000321105 SRSF1Q07955 248 aaKnown RBP eCLIP8.49□□□□□ -1.053e-7■■■□□ 17.9
TOP3A-201ENST00000321105 DEFB113Q30KQ7 82 aa8.49□□□□□ -1.05
TOP3A-201ENST00000321105 WFDC11Q8NEX6 87 aa8.49□□□□□ -1.05
TOP3A-201ENST00000321105 OR2K2Q8NGT1 345 aa8.49□□□□□ -1.05
TOP3A-201ENST00000321105 ATP5LO75964 103 aa8.49□□□□□ -1.05
TOP3A-201ENST00000321105 AVPP01185 164 aa8.49□□□□□ -1.05
TOP3A-201ENST00000321105 IGLL1P15814 213 aa8.49□□□□□ -1.05
TOP3A-201ENST00000321105 AGRNO00468 2067 aa8.49□□□□□ -1.05
TOP3A-201ENST00000321105 LY6LH3BQJ8 138 aa8.49□□□□□ -1.05
TOP3A-201ENST00000321105 IGLC2P0DOY2 106 aa8.49□□□□□ -1.05
TOP3A-201ENST00000321105 KIR3DS1Q14943 382 aa8.49□□□□□ -1.05
TOP3A-201ENST00000321105 SNHG12Q9BXW3 62 aa8.49□□□□□ -1.05
TOP3A-201ENST00000321105 RAI1Q7Z5J4 1906 aaPredicted RBP8.49□□□□□ -1.05
TOP3A-201ENST00000321105 IGHV7-4-1A0A0J9YVY3 117 aa8.49□□□□□ -1.05
TOP3A-201ENST00000321105 GATA3P23771 443 aa8.49□□□□□ -1.05
TOP3A-201ENST00000321105 RASL11AQ6T310 242 aa8.49□□□□□ -1.05
TOP3A-201ENST00000321105 MS4A6AQ9H2W1 248 aa8.49□□□□□ -1.05
TOP3A-201ENST00000321105 GEMIN7Q9H840 131 aaKnown RBP8.49□□□□□ -1.05
TOP3A-201ENST00000321105 SUMO2P61956 95 aaKnown RBP8.48□□□□□ -1.05
TOP3A-201ENST00000321105 GDF5OSQ5U4N7 250 aa8.48□□□□□ -1.05
TOP3A-201ENST00000321105 NHP2Q9NX24 153 aaKnown RBP8.48□□□□□ -1.05
TOP3A-201ENST00000321105 TOMM7Q9P0U1 55 aa8.48□□□□□ -1.05
TOP3A-201ENST00000321105 VPREB3Q9UKI3 123 aa8.48□□□□□ -1.05
TOP3A-201ENST00000321105 ASH1LQ9NR48 2969 aaKnown RBP8.48□□□□□ -1.05
TOP3A-201ENST00000321105 IGHV3-38A0A0C4DH36 116 aa8.48□□□□□ -1.05
TOP3A-201ENST00000321105 CRYGBP07316 175 aa8.48□□□□□ -1.05
TOP3A-201ENST00000321105 SMPXQ9UHP9 88 aa8.48□□□□□ -1.05
TOP3A-201ENST00000321105 CRXO43186 299 aaPredicted RBP8.48□□□□□ -1.05
TOP3A-201ENST00000321105 LAGE3Q14657 143 aa8.48□□□□□ -1.05
TOP3A-201ENST00000321105 PET117Q6UWS5 81 aa8.48□□□□□ -1.05
TOP3A-201ENST00000321105 TP73-AS1Q9UF72 201 aa8.48□□□□□ -1.05
TOP3A-201ENST00000321105 H3BUT2 72 aa8.47□□□□□ -1.05
TOP3A-201ENST00000321105 TNFRSF13BO14836 293 aaPredicted RBP8.47□□□□□ -1.05
TOP3A-201ENST00000321105 PLP1P60201 277 aa8.47□□□□□ -1.05
TOP3A-201ENST00000321105 DUSP14O95147 198 aaKnown RBP8.47□□□□□ -1.05
TOP3A-201ENST00000321105 DPH3P1Q9H4G8 78 aa8.47□□□□□ -1.05
TOP3A-201ENST00000321105 ITPR1Q14643 2758 aa8.47□□□□□ -1.05
TOP3A-201ENST00000321105 WI2-2373I1.2A0A1W2PRP0 233 aa8.47□□□□□ -1.05
TOP3A-201ENST00000321105 UBE2L6O14933 153 aa8.47□□□□□ -1.05
TOP3A-201ENST00000321105 DEFB130BP0DP73 79 aa8.47□□□□□ -1.05
TOP3A-201ENST00000321105 DEFB130AP0DP74 79 aa8.47□□□□□ -1.05
TOP3A-201ENST00000321105 LGALS3P17931 250 aaKnown RBP8.47□□□□□ -1.05
TOP3A-201ENST00000321105 GFRA4Q9GZZ7 299 aa8.47□□□□□ -1.05
TOP3A-201ENST00000321105 CYSLTR1Q9Y271 337 aa8.47□□□□□ -1.05
TOP3A-201ENST00000321105 RNASE13Q5GAN3 156 aaKnown RBP8.46□□□□□ -1.05
TOP3A-201ENST00000321105 CT83Q5H943 113 aa8.46□□□□□ -1.05
TOP3A-201ENST00000321105 IGHV4OR15-8A0A075B7B6 117 aa8.46□□□□□ -1.06
TOP3A-201ENST00000321105 A0A087WW49 117 aa8.46□□□□□ -1.06
TOP3A-201ENST00000321105 INS-IGF2F8WCM5 200 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms