RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 GOLT1AQ6ZVE7 132 aa2.4□□□□□ -2.03
SCAMP1-201ENST00000320280 LINC00052Q96N35 136 aa2.4□□□□□ -2.03
SCAMP1-201ENST00000320280 PARLQ9H300 379 aa2.4□□□□□ -2.03
SCAMP1-201ENST00000320280 TREM1Q9NP99 234 aa2.4□□□□□ -2.03
SCAMP1-201ENST00000320280 PRKDCP78527 4128 aaKnown RBP2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 IGHV1OR15-1A0A075B7D0 117 aa2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 IGHV3-35A0A0C4DH35 117 aa2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 G3V4G9 280 aa2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 K7EIL1 84 aa2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 TCAPO15273 167 aa2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 ZNF324O75467 553 aaPredicted RBP2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 TCL1AP56279 114 aa2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 FAM3BP58499 235 aaPredicted RBP2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 BAGE2Q86Y30 109 aa2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 SCRT2Q9NQ03 307 aa2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 IL36BQ9NZH7 164 aa2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 NOTCH2Q04721 2471 aa2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 MAST4O15021 2626 aa2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 TMEM218A2RU14 115 aa2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 RBMY1BA6NDE4 496 aaKnown RBP2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 RBMY1EA6NEQ0 496 aaKnown RBP2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 ZNF727A8MUV8 499 aa2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 A8MWL6 223 aa2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 SNAPINO95295 136 aa2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 PPP1R17O96001 155 aa2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 GPX1P07203 203 aa2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 RBMY1DP0C7P1 496 aaKnown RBP2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 CTRLP40313 264 aa2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 ATP5G3P48201 142 aa2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 FGF8P55075 233 aaPredicted RBP2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 PKIAP61925 76 aa2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 CENPWQ5EE01 88 aa2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 ACTL10Q5JWF8 245 aa2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 COMMD7Q86VX2 200 aa2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 EXOC3-AS1Q8N2X6 119 aa2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 ISOC2Q96AB3 205 aa2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 DAZAP1Q96EP5 407 aaKnown RBP2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 C9orf85Q96MD7 179 aa2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 SMIM7Q9BQ49 75 aa2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 LINC01549A6NIU2 74 aa2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 CRXO43186 299 aaPredicted RBP2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 MT-ND4LP03901 98 aa2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 CD7P09564 240 aa2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 S100A1P23297 94 aa2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 TIRAPP58753 221 aa2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 TMEM97Q5BJF2 176 aa2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 FAM159AQ6UWV7 190 aa2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 ZFP82Q8N141 532 aa2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 SVBPQ8N300 66 aa2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 POM121L12Q8N7R1 296 aa2.39□□□□□ -2.03
SCAMP1-201ENST00000320280 A8MWV9 139 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 CA1P00915 261 aaPredicted RBP2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 IGLV2-8P01709 118 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 FRMD6-AS1P0C7T7 363 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 TRGC1P0CF51 173 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 ASIPP42127 132 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 HAGHQ16775 308 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 RRN3P1Q2M238 152 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 FAM24BQ8N5W8 94 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 MRAPQ8TCY5 172 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 BORCS7Q96B45 105 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 VGLL1Q99990 258 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 KRTAP17-1Q9BYP8 105 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 RPP21Q9H633 154 aaKnown RBP2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 GSN-AS1Q9NRJ2 163 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 TEP1Q99973 2627 aaKnown RBP2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 TRAV26-1A0A087WT03 109 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 IGHV3-66A0A0C4DH42 116 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 K7EP13 123 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 M0R2P5 195 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 SPINK4O60575 86 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 P01737 135 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 SFTA3P0C7M3 94 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 IGLC6P0CF74 106 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 GFI1BQ5VTD9 330 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 KCNIP4Q6PIL6 250 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 Q6ZSN1 163 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 LINC01551Q86U37 167 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 RNF182Q8N6D2 247 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 RNASE8Q8TDE3 154 aaKnown RBP2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 TSKUQ8WUA8 353 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 LAMTOR2Q9Y2Q5 125 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 IGKV2-40A0A087WW87 121 aaPredicted RBP2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 IGHV3-49A0A0A0MS15 119 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 TRAV4A0A0B4J268 109 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 SNURFLB1AK76 121 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 K7EMI3 77 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 M0R381 172 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 M0R3E3 92 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 PHOX2AO14813 284 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 GATCO43716 136 aaKnown RBP2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 SH2D1AO60880 128 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 IGKV2D-40P01614 121 aaPredicted RBP2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 MT-ND6P03923 174 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 GIG44P09565 113 aaPredicted RBP2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 EDN2P20800 178 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 TFPI2P48307 235 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 UBE2G2P60604 165 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 RPL32P62910 135 aaKnown RBP2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 PRNTQ86SH4 94 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms