RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 NBR2O15453 112 aa7.46□□□□□ -1.22
PTPRA-202ENST00000318266 LY6HO94772 140 aa7.46□□□□□ -1.22
PTPRA-202ENST00000318266 SMCPP49901 116 aaPredicted RBP7.46□□□□□ -1.22
PTPRA-202ENST00000318266 NDPQ00604 133 aa7.46□□□□□ -1.22
PTPRA-202ENST00000318266 IGFL2Q6UWQ7 119 aa7.46□□□□□ -1.22
PTPRA-202ENST00000318266 C8orf86Q6ZUL3 223 aa7.46□□□□□ -1.22
PTPRA-202ENST00000318266 MYMXA0A1B0GTQ4 84 aa7.45□□□□□ -1.22
PTPRA-202ENST00000318266 GATA3P23771 443 aa7.45□□□□□ -1.22
PTPRA-202ENST00000318266 RAB1BQ9H0U4 201 aa7.45□□□□□ -1.22
PTPRA-202ENST00000318266 THBDP07204 575 aa7.45□□□□□ -1.22
PTPRA-202ENST00000318266 XGP55808 180 aa7.45□□□□□ -1.22
PTPRA-202ENST00000318266 KLHL30-AS1Q8NEE0 82 aa7.45□□□□□ -1.22
PTPRA-202ENST00000318266 SCGB3A1Q96QR1 104 aa7.44□□□□□ -1.22
PTPRA-202ENST00000318266 C1QTNF4Q9BXJ3 329 aa7.44□□□□□ -1.22
PTPRA-202ENST00000318266 CDIP1Q9H305 208 aa7.44□□□□□ -1.22
PTPRA-202ENST00000318266 HIF1ANQ9NWT6 349 aa7.44□□□□□ -1.22
PTPRA-202ENST00000318266 ZNF815PA8K554 130 aa7.44□□□□□ -1.22
PTPRA-202ENST00000318266 VSTM5A8MXK1 200 aa7.44□□□□□ -1.22
PTPRA-202ENST00000318266 PLNP26678 52 aa7.44□□□□□ -1.22
PTPRA-202ENST00000318266 C3orf36Q3SXR2 165 aa7.44□□□□□ -1.22
PTPRA-202ENST00000318266 TMEM78Q5T7P6 136 aa7.44□□□□□ -1.22
PTPRA-202ENST00000318266 NRACQ8N912 160 aa7.44□□□□□ -1.22
PTPRA-202ENST00000318266 PLEKHB2Q96CS7 222 aa7.44□□□□□ -1.22
PTPRA-202ENST00000318266 A0A0G2JNJ9 132 aa7.44□□□□□ -1.22
PTPRA-202ENST00000318266 F8VRH5 84 aa7.44□□□□□ -1.22
PTPRA-202ENST00000318266 M0R381 172 aa7.44□□□□□ -1.22
PTPRA-202ENST00000318266 LGALS1P09382 135 aaKnown RBP7.44□□□□□ -1.22
PTPRA-202ENST00000318266 TCTEX1D4Q5JR98 221 aa7.44□□□□□ -1.22
PTPRA-202ENST00000318266 SRSF8Q9BRL6 282 aaKnown RBP7.44□□□□□ -1.22
PTPRA-202ENST00000318266 PRADC1Q9BSG0 188 aa7.44□□□□□ -1.22
PTPRA-202ENST00000318266 Q9UFV3 132 aa7.44□□□□□ -1.22
PTPRA-202ENST00000318266 TAL2Q16559 108 aa7.43□□□□□ -1.22
PTPRA-202ENST00000318266 PSMG4Q5JS54 123 aa7.43□□□□□ -1.22
PTPRA-202ENST00000318266 CFAP126Q5VTH2 177 aa7.43□□□□□ -1.22
PTPRA-202ENST00000318266 SVIPQ8NHG7 77 aa7.43□□□□□ -1.22
PTPRA-202ENST00000318266 DLX4Q92988 240 aaPredicted RBP7.43□□□□□ -1.22
PTPRA-202ENST00000318266 AKAP6Q13023 2319 aa7.43□□□□□ -1.22
PTPRA-202ENST00000318266 IGLV11-55A0A075B6I3 123 aa7.43□□□□□ -1.22
PTPRA-202ENST00000318266 E7EQL1 145 aa7.43□□□□□ -1.22
PTPRA-202ENST00000318266 H7C1H1 209 aa7.43□□□□□ -1.22
PTPRA-202ENST00000318266 CTSGP08311 255 aa7.43□□□□□ -1.22
PTPRA-202ENST00000318266 SLC25A16P16260 332 aa7.43□□□□□ -1.22
PTPRA-202ENST00000318266 KIR2DL4Q99706 377 aa7.43□□□□□ -1.22
PTPRA-202ENST00000318266 CNFNQ9BYD5 112 aa7.43□□□□□ -1.22
PTPRA-202ENST00000318266 AGPAT4-IT1Q9H0P7 198 aa7.43□□□□□ -1.22
PTPRA-202ENST00000318266 KAAG1Q9UBP8 84 aa7.43□□□□□ -1.22
PTPRA-202ENST00000318266 PRSS29PA6NIE9 313 aa7.42□□□□□ -1.22
PTPRA-202ENST00000318266 RNF183Q96D59 192 aa7.42□□□□□ -1.22
PTPRA-202ENST00000318266 RPL39LQ96EH5 51 aaKnown RBP7.42□□□□□ -1.22
PTPRA-202ENST00000318266 TLN1Q9Y490 2541 aaKnown RBP7.42□□□□□ -1.22
PTPRA-202ENST00000318266 LINC01546A6NGU7 62 aa7.42□□□□□ -1.22
PTPRA-202ENST00000318266 LINC01559Q495D7 138 aa7.42□□□□□ -1.22
PTPRA-202ENST00000318266 Q6ZUT4 128 aa7.42□□□□□ -1.22
PTPRA-202ENST00000318266 TSPAN13O95857 204 aa7.42□□□□□ -1.22
PTPRA-202ENST00000318266 C5orf64Q2M2E5 130 aa7.42□□□□□ -1.22
PTPRA-202ENST00000318266 MGPP08493 103 aa7.41□□□□□ -1.22
PTPRA-202ENST00000318266 ANXA2RQ3ZCQ2 193 aa7.41□□□□□ -1.22
PTPRA-202ENST00000318266 COX8CQ7Z4L0 72 aa7.41□□□□□ -1.22
PTPRA-202ENST00000318266 SS18L2Q9UHA2 77 aa7.41□□□□□ -1.22
PTPRA-202ENST00000318266 IGHV7-4-1A0A0J9YVY3 117 aa7.41□□□□□ -1.22
PTPRA-202ENST00000318266 IGF1P05019 195 aa7.41□□□□□ -1.22
PTPRA-202ENST00000318266 ECSCRQ19T08 205 aa7.41□□□□□ -1.22
PTPRA-202ENST00000318266 SMIM2Q9BVW6 85 aa7.41□□□□□ -1.22
PTPRA-202ENST00000318266 DPM3Q9P2X0 92 aa7.41□□□□□ -1.22
PTPRA-202ENST00000318266 ANKHD1Q8IWZ3 2542 aaKnown RBP7.41□□□□□ -1.22
PTPRA-202ENST00000318266 H7C2G1 150 aa7.4□□□□□ -1.22
PTPRA-202ENST00000318266 DEFB1P60022 68 aa7.4□□□□□ -1.22
PTPRA-202ENST00000318266 C14orf178Q8N769 122 aaPredicted RBP7.4□□□□□ -1.22
PTPRA-202ENST00000318266 COL6A6A6NMZ7 2263 aa7.4□□□□□ -1.22
PTPRA-202ENST00000318266 LY6LH3BQJ8 138 aa7.4□□□□□ -1.22
PTPRA-202ENST00000318266 CLEC3BP05452 202 aa7.4□□□□□ -1.22
PTPRA-202ENST00000318266 SCGB1C2P0DMR2 95 aa7.4□□□□□ -1.22
PTPRA-202ENST00000318266 CARD19Q96LW7 228 aa7.4□□□□□ -1.22
PTPRA-202ENST00000318266 PSMG3-AS1Q96PY0 264 aa7.4□□□□□ -1.22
PTPRA-202ENST00000318266 PRB1P04280 392 aa7.39□□□□□ -1.23
PTPRA-202ENST00000318266 C15orf32Q32M92 178 aa7.39□□□□□ -1.23
PTPRA-202ENST00000318266 C2orf66Q6UXQ4 117 aa7.39□□□□□ -1.23
PTPRA-202ENST00000318266 FAM57AQ8TBR7 257 aa7.39□□□□□ -1.23
PTPRA-202ENST00000318266 FASNP49327 2511 aaKnown RBP7.39□□□□□ -1.23
PTPRA-202ENST00000318266 TCL1BO95988 128 aa7.39□□□□□ -1.23
PTPRA-202ENST00000318266 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.39□□□□□ -1.23
PTPRA-202ENST00000318266 RASL10AQ92737 203 aa7.39□□□□□ -1.23
PTPRA-202ENST00000318266 ANAPC13Q9BS18 74 aa7.39□□□□□ -1.23
PTPRA-202ENST00000318266 TMEM238LA0A1B0GVL6 79 aa7.39□□□□□ -1.23
PTPRA-202ENST00000318266 A6NJY4 79 aa7.39□□□□□ -1.23
PTPRA-202ENST00000318266 FAM90A27PA6NNH2 459 aa7.39□□□□□ -1.23
PTPRA-202ENST00000318266 PRTN3P24158 256 aa7.39□□□□□ -1.23
PTPRA-202ENST00000318266 S100A4P26447 101 aaKnown RBP7.39□□□□□ -1.23
PTPRA-202ENST00000318266 ARL3P36405 182 aa7.39□□□□□ -1.23
PTPRA-202ENST00000318266 SUMO2P61956 95 aaKnown RBP7.39□□□□□ -1.23
PTPRA-202ENST00000318266 PRR9Q5T870 116 aa7.39□□□□□ -1.23
PTPRA-202ENST00000318266 CLEC19AQ6UXS0 136 aa7.39□□□□□ -1.23
PTPRA-202ENST00000318266 BAALCQ8WXS3 180 aa7.39□□□□□ -1.23
PTPRA-202ENST00000318266 ZNF48Q96MX3 618 aaPredicted RBP7.39□□□□□ -1.23
PTPRA-202ENST00000318266 PTPRQQ9UMZ3 2332 aa7.38□□□□□ -1.23
PTPRA-202ENST00000318266 NEXN-AS1Q8NBZ9 246 aa7.38□□□□□ -1.23
PTPRA-202ENST00000318266 RAX2Q96IS3 184 aa7.38□□□□□ -1.23
PTPRA-202ENST00000318266 BUB3O43684 328 aa7.38□□□□□ -1.23
PTPRA-202ENST00000318266 Q6ZS46 218 aa7.38□□□□□ -1.23
PTPRA-202ENST00000318266 TMEM190Q8WZ59 177 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms